FFCP PHASE1:Mm9::chr11:9019282..9019299,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=781 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:9019282..9019299,+ | |||
|description=CAGE_peak_at_chr11:9019282..9019299,+ | |description=CAGE_peak_at_chr11:9019282..9019299,+ | ||
|id=chr11:9019282..9019299,+ | |id=chr11:9019282..9019299,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.89e-11!9;CL:0002251!4.89e-11!9;CL:0000066!1.68e-08!25;CL:0000239!3.52e-08!6;CL:0000677!3.52e-08!6;CL:0000212!3.52e-08!6;CL:0000584!3.52e-08!6;CL:0002076!5.94e-07!15;CL:0000223!7.22e-07!20;CL:0000075!8.15e-07!7 | |ontology_enrichment_celltype=CL:0002563!4.89e-11!9;CL:0002251!4.89e-11!9;CL:0000066!1.68e-08!25;CL:0000239!3.52e-08!6;CL:0000677!3.52e-08!6;CL:0000212!3.52e-08!6;CL:0000584!3.52e-08!6;CL:0002076!5.94e-07!15;CL:0000223!7.22e-07!20;CL:0000075!8.15e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.05e-14,6;CL:0000677,2.05e-14,6;CL:0000584,2.05e-14,6;CL:0002563,4.18e-13,9;CL:0002251,4.18e-13,9;CL:0000075,2.56e-12,7;CL:0000066,7.45e-12,25;CL:0000682,4.04e-11,3;CL:0002076,1.26e-07,15;CL:0000223,2.30e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.16e-18!15;UBERON:0001242!4.62e-16!13;UBERON:0000060!4.62e-16!13;UBERON:0001262!4.62e-16!13;UBERON:0004786!4.62e-16!13;UBERON:0000160!9.50e-14!43;UBERON:0004923!2.53e-12!24;UBERON:0005409!5.70e-12!59;UBERON:0003350!4.89e-11!9;UBERON:0004808!4.89e-11!9;UBERON:0001277!4.89e-11!9;UBERON:0004119!1.70e-10!130;UBERON:0000925!1.70e-10!130;UBERON:0006595!1.70e-10!130;UBERON:0001007!3.79e-10!128;UBERON:0001555!3.79e-10!128;UBERON:0007026!3.79e-10!128;UBERON:0004921!6.08e-09!126;UBERON:0004185!6.08e-09!126;UBERON:0000485!1.48e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.52e-32,31;UBERON:0000344,2.68e-31,15;UBERON:0001242,2.57e-25,13;UBERON:0001262,2.57e-25,13;UBERON:0004786,2.57e-25,13;UBERON:0005409,2.65e-22,47;UBERON:0004923,1.09e-18,24;UBERON:0002108,3.13e-14,4;UBERON:0003350,4.18e-13,9;UBERON:0004808,4.18e-13,9;UBERON:0001277,4.18e-13,9;UBERON:0000331,1.34e-11,3;UBERON:0002116,1.34e-11,3;UBERON:0001204,1.34e-11,3;UBERON:0001168,1.34e-11,3;UBERON:0000485,1.29e-10,11;UBERON:0001007,6.18e-10,116;UBERON:0001555,6.18e-10,116;UBERON:0007026,6.18e-10,116;UBERON:0004119,1.08e-09,118;UBERON:0000925,1.08e-09,118;UBERON:0006595,1.08e-09,118;UBERON:0004921,6.20e-08,114;UBERON:0001962,9.86e-08,2;UBERON:0001961,9.86e-08,2;UBERON:0001744,9.86e-08,2;UBERON:0001155,1.15e-07,2;UBERON:0000059,1.15e-07,2 | |||
|phase1_expression=0,18.4956966048861,11.8299802241279,28.1291716515352,27.5492651470491,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,8.47959840805055,11.4704640533585,16.6527269593356,18.5227658348402,9.48073423817912,46.5557377668116,74.8529485386994,11.5299865540758,0,0,0,0.866554859253824,0.831173226792462,1.02084678131185,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.869593466105033,0,1.3599426674155,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.432982082022428,0,0,5.709193985953,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,1.86391761218122,0,0,27.0784478521107,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0.210289948564127,0,57.1624494561971,5.81791246659797,0,0,0,0.201683524623343,0,0,2.37264530772256,0,0,0,0,7.19055526923377,3.45820879799511,5.77509692437665,0,0,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0.470996183524124,0.493588655687202,0.296452627087149,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,1.1659233465194,0,0,0.206386867963223,0,0,0,0,0,0,0.414599921413271,0,0,0,0.108005340821801,0,0,0.269728692769641,0,2.09404753587224,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39736270956253,0,0.295379054349154,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0.0897138566094757,0,0.19318959403219,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,18.4956966048861,11.8299802241279,28.1291716515352,27.5492651470491,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,8.47959840805055,11.4704640533585,16.6527269593356,18.5227658348402,9.48073423817912,46.5557377668116,74.8529485386994,11.5299865540758,0,0,0,0.866554859253824,0.831173226792462,1.02084678131185,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.869593466105033,0,1.3599426674155,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.432982082022428,0,0,5.709193985953,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,1.86391761218122,0,0,27.0784478521107,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0.210289948564127,0,57.1624494561971,5.81791246659797,0,0,0,0.201683524623343,0,0,2.37264530772256,0,0,0,0,7.19055526923377,3.45820879799511,5.77509692437665,0,0,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0.470996183524124,0.493588655687202,0.296452627087149,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,1.1659233465194,0,0,0.206386867963223,0,0,0,0,0,0,0.414599921413271,0,0,0,0.108005340821801,0,0,0.269728692769641,0,2.09404753587224,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39736270956253,0,0.295379054349154,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0.0897138566094757,0,0.19318959403219,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr11:9019282..9019299,+ | |short_description=p@chr11:9019282..9019299,+ | ||
}} | }} |
Latest revision as of 08:03, 4 August 2015
Short description: | p@chr11:9019282..9019299, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:9019282..9019299, + |
Coexpression cluster: | MCL_coexpression_mm9:781 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.05e-14 | 6 |
gut absorptive cell | 2.05e-14 | 6 |
enterocyte | 2.05e-14 | 6 |
intestinal epithelial cell | 4.18e-13 | 9 |
epithelial cell of alimentary canal | 4.18e-13 | 9 |
columnar/cuboidal epithelial cell | 2.56e-12 | 7 |
epithelial cell | 7.45e-12 | 25 |
M cell of gut | 4.04e-11 | 3 |
endo-epithelial cell | 1.26e-07 | 15 |
endodermal cell | 2.30e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.52e-32 | 31 |
mucosa | 2.68e-31 | 15 |
intestinal mucosa | 2.57e-25 | 13 |
wall of intestine | 2.57e-25 | 13 |
gastrointestinal system mucosa | 2.57e-25 | 13 |
gastrointestinal system | 2.65e-22 | 47 |
organ component layer | 1.09e-18 | 24 |
small intestine | 3.13e-14 | 4 |
epithelium of mucosa | 4.18e-13 | 9 |
gastrointestinal system epithelium | 4.18e-13 | 9 |
intestinal epithelium | 4.18e-13 | 9 |
ileal mucosa | 1.34e-11 | 3 |
ileum | 1.34e-11 | 3 |
mucosa of small intestine | 1.34e-11 | 3 |
wall of small intestine | 1.34e-11 | 3 |
simple columnar epithelium | 1.29e-10 | 11 |
digestive system | 6.18e-10 | 116 |
digestive tract | 6.18e-10 | 116 |
primitive gut | 6.18e-10 | 116 |
endoderm-derived structure | 1.08e-09 | 118 |
endoderm | 1.08e-09 | 118 |
presumptive endoderm | 1.08e-09 | 118 |
subdivision of digestive tract | 6.20e-08 | 114 |
gut-associated lymphoid tissue | 9.86e-08 | 2 |
mucosa-associated lymphoid tissue | 9.86e-08 | 2 |
lymphoid tissue | 9.86e-08 | 2 |
colon | 1.15e-07 | 2 |
large intestine | 1.15e-07 | 2 |