FFCP PHASE1:Mm9::chr5:32301242..32301266,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:32301242..32301266,-|id=chr5:32301242..32301266,-|ontology_enrichment_celltype=CL:0000239!3.71e-17!6;CL:0000677!3.71e-17!6;CL:0000212!3.71e-17!6;CL:0000584!3.71e-17!6;CL:0002563!1.10e-14!9;CL:0002251!1.10e-14!9;CL:0000075!1.33e-14!7;CL:0000473!8.49e-10!3;CL:0000627!8.49e-10!3;CL:0000682!8.49e-10!3;CL:0000066!9.62e-10!25;CL:0002076!2.17e-08!15|ontology_enrichment_celltype_v019_2=CL:0000239,1.56e-29,6;CL:0000677,1.56e-29,6;CL:0000584,1.56e-29,6;CL:0000075,2.83e-25,7;CL:0002563,1.38e-19,9;CL:0002251,1.38e-19,9;CL:0000682,2.59e-16,3;CL:0000066,2.92e-15,25;CL:0002076,1.35e-11,15;CL:0000223,1.38e-08,20;CL:0000473,2.87e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.13e-29!15;UBERON:0005409!2.78e-25!59;UBERON:0001242!8.42e-24!13;UBERON:0000060!8.42e-24!13;UBERON:0001262!8.42e-24!13;UBERON:0004786!8.42e-24!13;UBERON:0000160!1.15e-18!43;UBERON:0004923!4.71e-17!24;UBERON:0003350!1.10e-14!9;UBERON:0004808!1.10e-14!9;UBERON:0001277!1.10e-14!9;UBERON:0001007!6.90e-12!128;UBERON:0001555!6.90e-12!128;UBERON:0007026!6.90e-12!128;UBERON:0000485!7.98e-12!11;UBERON:0004119!1.30e-11!130;UBERON:0000925!1.30e-11!130;UBERON:0006595!1.30e-11!130;UBERON:0004921!7.25e-10!126;UBERON:0004185!7.25e-10!126;UBERON:0000331!3.27e-08!3;UBERON:0002116!3.27e-08!3;UBERON:0001204!3.27e-08!3;UBERON:0001168!3.27e-08!3;UBERON:0000945!6.44e-07!16;UBERON:0010039!6.44e-07!16;UBERON:0001962!7.17e-07!2;UBERON:0001961!7.17e-07!2;UBERON:0001744!7.17e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.26e-26,15;UBERON:0000160,6.59e-21,31;UBERON:0003350,1.38e-19,9;UBERON:0004808,1.38e-19,9;UBERON:0001277,1.38e-19,9;UBERON:0001242,3.17e-18,13;UBERON:0001262,3.17e-18,13;UBERON:0004786,3.17e-18,13;UBERON:0000485,5.84e-16,11;UBERON:0004923,8.78e-16,24;UBERON:0005409,1.16e-15,47;UBERON:0001962,4.38e-11,2;UBERON:0001961,4.38e-11,2;UBERON:0001744,4.38e-11,2;UBERON:0001155,1.22e-10,2;UBERON:0000059,1.22e-10,2;UBERON:0002465,1.13e-07,3;UBERON:0001007,2.49e-07,116;UBERON:0001555,2.49e-07,116;UBERON:0007026,2.49e-07,116;UBERON:0004119,3.63e-07,118;UBERON:0000925,3.63e-07,118;UBERON:0006595,3.63e-07,118|phase1_expression=0,9.42233600626275,11.3749809847384,1.51232105653415,1.50268718983904,3.3575854382378,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7997726838022,4.35877634027623,5.7423196411502,7.75371593086335,7.32602191132023,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,0.528901133327089,0,0,0.128867461322093,0,0,0,1.42358718463353,0,0,0,0.38992817423824,0,1.29682829924817,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0.418176592028937,0,0.674321731924103,0.165306911450672,0.523511883968059,2.85152941241944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:32301242..32301266,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:32301242..32301266,- | |||
|description=CAGE_peak_at_chr5:32301242..32301266,- | |||
|id=chr5:32301242..32301266,- | |||
|ontology_enrichment_celltype=CL:0000239!3.71e-17!6;CL:0000677!3.71e-17!6;CL:0000212!3.71e-17!6;CL:0000584!3.71e-17!6;CL:0002563!1.10e-14!9;CL:0002251!1.10e-14!9;CL:0000075!1.33e-14!7;CL:0000473!8.49e-10!3;CL:0000627!8.49e-10!3;CL:0000682!8.49e-10!3;CL:0000066!9.62e-10!25;CL:0002076!2.17e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.56e-29,6;CL:0000677,1.56e-29,6;CL:0000584,1.56e-29,6;CL:0000075,2.83e-25,7;CL:0002563,1.38e-19,9;CL:0002251,1.38e-19,9;CL:0000682,2.59e-16,3;CL:0000066,2.92e-15,25;CL:0002076,1.35e-11,15;CL:0000223,1.38e-08,20;CL:0000473,2.87e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.13e-29!15;UBERON:0005409!2.78e-25!59;UBERON:0001242!8.42e-24!13;UBERON:0000060!8.42e-24!13;UBERON:0001262!8.42e-24!13;UBERON:0004786!8.42e-24!13;UBERON:0000160!1.15e-18!43;UBERON:0004923!4.71e-17!24;UBERON:0003350!1.10e-14!9;UBERON:0004808!1.10e-14!9;UBERON:0001277!1.10e-14!9;UBERON:0001007!6.90e-12!128;UBERON:0001555!6.90e-12!128;UBERON:0007026!6.90e-12!128;UBERON:0000485!7.98e-12!11;UBERON:0004119!1.30e-11!130;UBERON:0000925!1.30e-11!130;UBERON:0006595!1.30e-11!130;UBERON:0004921!7.25e-10!126;UBERON:0004185!7.25e-10!126;UBERON:0000331!3.27e-08!3;UBERON:0002116!3.27e-08!3;UBERON:0001204!3.27e-08!3;UBERON:0001168!3.27e-08!3;UBERON:0000945!6.44e-07!16;UBERON:0010039!6.44e-07!16;UBERON:0001962!7.17e-07!2;UBERON:0001961!7.17e-07!2;UBERON:0001744!7.17e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.26e-26,15;UBERON:0000160,6.59e-21,31;UBERON:0003350,1.38e-19,9;UBERON:0004808,1.38e-19,9;UBERON:0001277,1.38e-19,9;UBERON:0001242,3.17e-18,13;UBERON:0001262,3.17e-18,13;UBERON:0004786,3.17e-18,13;UBERON:0000485,5.84e-16,11;UBERON:0004923,8.78e-16,24;UBERON:0005409,1.16e-15,47;UBERON:0001962,4.38e-11,2;UBERON:0001961,4.38e-11,2;UBERON:0001744,4.38e-11,2;UBERON:0001155,1.22e-10,2;UBERON:0000059,1.22e-10,2;UBERON:0002465,1.13e-07,3;UBERON:0001007,2.49e-07,116;UBERON:0001555,2.49e-07,116;UBERON:0007026,2.49e-07,116;UBERON:0004119,3.63e-07,118;UBERON:0000925,3.63e-07,118;UBERON:0006595,3.63e-07,118 | |||
|phase1_expression=0,9.42233600626275,11.3749809847384,1.51232105653415,1.50268718983904,3.3575854382378,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7997726838022,4.35877634027623,5.7423196411502,7.75371593086335,7.32602191132023,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,0.528901133327089,0,0,0.128867461322093,0,0,0,1.42358718463353,0,0,0,0.38992817423824,0,1.29682829924817,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0.418176592028937,0,0.674321731924103,0.165306911450672,0.523511883968059,2.85152941241944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:32301242..32301266,- | |||
}} |
Latest revision as of 07:25, 4 August 2015
Short description: | p@chr5:32301242..32301266, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:32301242..32301266, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.56e-29 | 6 |
gut absorptive cell | 1.56e-29 | 6 |
enterocyte | 1.56e-29 | 6 |
columnar/cuboidal epithelial cell | 2.83e-25 | 7 |
intestinal epithelial cell | 1.38e-19 | 9 |
epithelial cell of alimentary canal | 1.38e-19 | 9 |
M cell of gut | 2.59e-16 | 3 |
epithelial cell | 2.92e-15 | 25 |
endo-epithelial cell | 1.35e-11 | 15 |
endodermal cell | 1.38e-08 | 20 |
defensive cell | 2.87e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.26e-26 | 15 |
intestine | 6.59e-21 | 31 |
epithelium of mucosa | 1.38e-19 | 9 |
gastrointestinal system epithelium | 1.38e-19 | 9 |
intestinal epithelium | 1.38e-19 | 9 |
intestinal mucosa | 3.17e-18 | 13 |
wall of intestine | 3.17e-18 | 13 |
gastrointestinal system mucosa | 3.17e-18 | 13 |
simple columnar epithelium | 5.84e-16 | 11 |
organ component layer | 8.78e-16 | 24 |
gastrointestinal system | 1.16e-15 | 47 |
gut-associated lymphoid tissue | 4.38e-11 | 2 |
mucosa-associated lymphoid tissue | 4.38e-11 | 2 |
lymphoid tissue | 4.38e-11 | 2 |
colon | 1.22e-10 | 2 |
large intestine | 1.22e-10 | 2 |
lymphoid system | 1.13e-07 | 3 |
digestive system | 2.49e-07 | 116 |
digestive tract | 2.49e-07 | 116 |
primitive gut | 2.49e-07 | 116 |
endoderm-derived structure | 3.63e-07 | 118 |
endoderm | 3.63e-07 | 118 |
presumptive endoderm | 3.63e-07 | 118 |