FFCP PHASE1:Mm9::chr16:95514708..95514717,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:95514708..95514717,+
|short_description=p@chr16:95514708..95514717,+
|description=CAGE_peak_at_chr16:95514708..95514717,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=180 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:95514708..95514717,+ | |||
|description=CAGE_peak_at_chr16:95514708..95514717,+ | |||
|id=chr16:95514708..95514717,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.70e-10,3;CL:0000239,6.91e-09,6;CL:0000677,6.91e-09,6;CL:0000584,6.91e-09,6;CL:0000075,1.29e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!8.44e-11!23;UBERON:0000974!8.44e-11!23;UBERON:0004807!8.44e-11!23;UBERON:0005058!8.44e-11!23;UBERON:0003351!8.44e-11!23;UBERON:0009113!8.44e-11!23;UBERON:0003295!8.44e-11!23;UBERON:0009722!8.44e-11!23;UBERON:0005562!8.44e-11!23;UBERON:0007690!8.44e-11!23;UBERON:0006562!3.48e-10!24;UBERON:0003408!3.48e-10!24;UBERON:0001557!3.48e-10!24;UBERON:0001042!3.48e-10!24;UBERON:0008814!3.48e-10!24;UBERON:0009145!3.48e-10!24;UBERON:0000072!1.28e-08!27;UBERON:0004177!9.15e-08!29;UBERON:0000063!8.23e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.89e-11,23;UBERON:0000974,8.89e-11,23;UBERON:0004807,8.89e-11,23;UBERON:0005058,8.89e-11,23;UBERON:0003351,8.89e-11,23;UBERON:0009113,8.89e-11,23;UBERON:0003295,8.89e-11,23;UBERON:0009722,8.89e-11,23;UBERON:0005562,8.89e-11,23;UBERON:0007690,8.89e-11,23;UBERON:0002465,1.96e-10,3;UBERON:0006562,2.96e-10,24;UBERON:0003408,2.96e-10,24;UBERON:0001557,2.96e-10,24;UBERON:0001042,2.96e-10,24;UBERON:0008814,2.96e-10,24;UBERON:0009145,2.96e-10,24;UBERON:0000072,6.35e-09,27;UBERON:0004177,3.44e-08,29;UBERON:0005057,3.44e-08,29;UBERON:0000077,4.92e-08,35;UBERON:0001962,6.89e-08,2;UBERON:0001961,6.89e-08,2;UBERON:0001744,6.89e-08,2;UBERON:0002193,7.10e-08,48;UBERON:0002405,7.10e-08,48;UBERON:0003929,8.20e-08,55;UBERON:0004923,1.26e-07,24;UBERON:0000344,2.09e-07,15 | |||
|phase1_expression=0,45.3668029931169,36.3999391511629,0,0,4.8684988854448,4.90586545250604,1.80772652818207,0.140788722151667,0,0.171217968225505,0.159544317990673,0,0,0,0,0,0,0,0,0.510259740906419,0,0,143.513203245686,161.504133871288,30.4342940980961,8.61523992318149,15.0829862880122,0,0.252030129759931,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0,0,0.85960031981627,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,2.07150306917737,0,0,0,0,0,0.117588707135705,0,62.2931318690622,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949058123089023,0.494096864172033,0.251335208800269,0,1.36474860983384,0,0.216138049874694,0,0,0,0,0.407302655690628,0.193952487167626,0.701358198903186,1.96033265085198,3.09981310757165,5.49495547444812,3.94870924549762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41412248023371,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0,0.389762468933385,0.537080087002444,1.39076948346885,2.04332264183947,2.06765338044408,1.81739609906666,1.752756553065,1.91569751759997,4.28814675254911,2.21287235772758,3.3894301632655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0,0.114870937911227,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0,0.409231043169689,0.154936841185966,0.385813221962283,0,0,0,0,0,0 | |phase1_expression=0,45.3668029931169,36.3999391511629,0,0,4.8684988854448,4.90586545250604,1.80772652818207,0.140788722151667,0,0.171217968225505,0.159544317990673,0,0,0,0,0,0,0,0,0.510259740906419,0,0,143.513203245686,161.504133871288,30.4342940980961,8.61523992318149,15.0829862880122,0,0.252030129759931,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0,0,0.85960031981627,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,2.07150306917737,0,0,0,0,0,0.117588707135705,0,62.2931318690622,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949058123089023,0.494096864172033,0.251335208800269,0,1.36474860983384,0,0.216138049874694,0,0,0,0,0.407302655690628,0.193952487167626,0.701358198903186,1.96033265085198,3.09981310757165,5.49495547444812,3.94870924549762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41412248023371,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0,0.389762468933385,0.537080087002444,1.39076948346885,2.04332264183947,2.06765338044408,1.81739609906666,1.752756553065,1.91569751759997,4.28814675254911,2.21287235772758,3.3894301632655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0,0.114870937911227,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0,0.409231043169689,0.154936841185966,0.385813221962283,0,0,0,0,0,0 | ||
|short_description=p@chr16:95514708..95514717,+ | |||
}} | }} |
Latest revision as of 06:12, 4 August 2015
Short description: | p@chr16:95514708..95514717, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:95514708..95514717, + |
Coexpression cluster: | MCL_coexpression_mm9:180 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.70e-10 | 3 |
brush border epithelial cell | 6.91e-09 | 6 |
gut absorptive cell | 6.91e-09 | 6 |
enterocyte | 6.91e-09 | 6 |
columnar/cuboidal epithelial cell | 1.29e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.89e-11 | 23 |
neck | 8.89e-11 | 23 |
respiratory system epithelium | 8.89e-11 | 23 |
hemolymphoid system gland | 8.89e-11 | 23 |
pharyngeal epithelium | 8.89e-11 | 23 |
thymic region | 8.89e-11 | 23 |
pharyngeal gland | 8.89e-11 | 23 |
entire pharyngeal arch endoderm | 8.89e-11 | 23 |
thymus primordium | 8.89e-11 | 23 |
early pharyngeal endoderm | 8.89e-11 | 23 |
lymphoid system | 1.96e-10 | 3 |
pharynx | 2.96e-10 | 24 |
gland of gut | 2.96e-10 | 24 |
upper respiratory tract | 2.96e-10 | 24 |
chordate pharynx | 2.96e-10 | 24 |
pharyngeal arch system | 2.96e-10 | 24 |
pharyngeal region of foregut | 2.96e-10 | 24 |
segment of respiratory tract | 6.35e-09 | 27 |
hemopoietic organ | 3.44e-08 | 29 |
immune organ | 3.44e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 4.92e-08 | 35 |
gut-associated lymphoid tissue | 6.89e-08 | 2 |
mucosa-associated lymphoid tissue | 6.89e-08 | 2 |
lymphoid tissue | 6.89e-08 | 2 |
hemolymphoid system | 7.10e-08 | 48 |
immune system | 7.10e-08 | 48 |
gut epithelium | 8.20e-08 | 55 |
organ component layer | 1.26e-07 | 24 |
mucosa | 2.09e-07 | 15 |