FFCP PHASE1:Mm9::chr7:130358374..130358400,+: Difference between revisions
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{{FFCP|EntrezGene=233836|HGNC=|MCL_coexpression_id=24|UniProt=Q8K0E3|association_with_transcript=0bp_to_NM_146198,uc009jpg.1,uc009jph.1_5end|description=CAGE_peak_2_at_Slc5a11_5end|id=chr7:130358374..130358400,+|ontology_enrichment_celltype=CL:0002563!7.89e-10!9;CL:0002251!7.89e-10!9;CL:0000239!5.85e-08!6;CL:0000677!5.85e-08!6;CL:0000212!5.85e-08!6;CL:0000584!5.85e-08!6|ontology_enrichment_celltype_v019_2=CL:0000239,4.58e-13,6;CL:0000677,4.58e-13,6;CL:0000584,4.58e-13,6;CL:0000075,4.32e-11,7;CL:0002563,1.86e-08,9;CL:0002251,1.86e-08,9;CL:0000682,1.92e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.50e-18!43;UBERON:0000344!5.92e-14!15;UBERON:0005409!2.52e-13!59;UBERON:0001242!5.46e-12!13;UBERON:0000060!5.46e-12!13;UBERON:0001262!5.46e-12!13;UBERON:0004786!5.46e-12!13;UBERON:0003350!7.89e-10!9;UBERON:0004808!7.89e-10!9;UBERON:0001277!7.89e-10!9;UBERON:0004923!3.58e-08!24;UBERON:0000485!1.29e-07!11;UBERON:0002113!8.97e-07!14;UBERON:0003918!8.97e-07!14;UBERON:0005095!8.97e-07!14;UBERON:0007687!8.97e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.50e-37,31;UBERON:0005409,1.86e-22,47;UBERON:0000344,4.47e-16,15;UBERON:0001242,8.42e-13,13;UBERON:0001262,8.42e-13,13;UBERON:0004786,8.42e-13,13;UBERON:0004923,3.80e-09,24;UBERON:0002113,1.09e-08,14;UBERON:0003918,1.09e-08,14;UBERON:0011143,1.09e-08,14;UBERON:0005095,1.09e-08,14;UBERON:0007687,1.09e-08,14;UBERON:0003350,1.86e-08,9;UBERON:0004808,1.86e-08,9;UBERON:0001277,1.86e-08,9;UBERON:0001007,4.07e-07,116;UBERON:0001555,4.07e-07,116;UBERON:0007026,4.07e-07,116;UBERON:0004119,6.77e-07,118;UBERON:0000925,6.77e-07,118;UBERON:0006595,6.77e-07,118;UBERON:0000485,8.78e-07,11|phase1_expression=0,11.5161884520989,12.739978702907,31.7587421872172,50.0895729946347,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,4.47978783821539,3.21172993494038,14.9300310669905,9.90752591165872,6.67960821326256,8.36103045608045,13.6096270070363,0,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,4.45317130904334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9038220854358,0,0,0,0,0,0,0.173824320192276,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.4247589876552,11.6358249331959,0,0,1.54640953586512,3.83198696784351,7.33847544688072,8.94060442729028,20.404749646414,13.1759163779209,5.27803938480566,3.97912944082302,1.36474860983384,25.1669434423182,17.0749059401008,18.9184209591649,0.189667900953082,0.114248512609729,2.25415471346161,1.62921062276251,1.93952487167626,1.96380295692892,4.61626721007078,11.0707610984702,21.0378295307442,18.8797660800355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0,0,0,20.4036585640896,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0.50695859978048,0.188626341386076,0.280924522409647,0.320125762024346,0.574354689556133,1.42888107384922,0.463537303779422,0.192909220463705,0,0.588795680537589,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0.338458431566706,0.914639864363863,0.263069711437843,0.407412341537585,0,0,0.197008964751127,0,0.619747364743864,0.192906610981141,0,0,0,0,0,0|short_description=p2@Slc5a11}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:233836 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K0E3 | |||
|association_with_transcript=0bp_to_NM_146198,uc009jpg.1,uc009jph.1_5end | |||
|cluster_id=chr7:130358374..130358400,+ | |||
|description=CAGE_peak_2_at_Slc5a11_5end | |||
|id=chr7:130358374..130358400,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.89e-10!9;CL:0002251!7.89e-10!9;CL:0000239!5.85e-08!6;CL:0000677!5.85e-08!6;CL:0000212!5.85e-08!6;CL:0000584!5.85e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.58e-13,6;CL:0000677,4.58e-13,6;CL:0000584,4.58e-13,6;CL:0000075,4.32e-11,7;CL:0002563,1.86e-08,9;CL:0002251,1.86e-08,9;CL:0000682,1.92e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.50e-18!43;UBERON:0000344!5.92e-14!15;UBERON:0005409!2.52e-13!59;UBERON:0001242!5.46e-12!13;UBERON:0000060!5.46e-12!13;UBERON:0001262!5.46e-12!13;UBERON:0004786!5.46e-12!13;UBERON:0003350!7.89e-10!9;UBERON:0004808!7.89e-10!9;UBERON:0001277!7.89e-10!9;UBERON:0004923!3.58e-08!24;UBERON:0000485!1.29e-07!11;UBERON:0002113!8.97e-07!14;UBERON:0003918!8.97e-07!14;UBERON:0005095!8.97e-07!14;UBERON:0007687!8.97e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.50e-37,31;UBERON:0005409,1.86e-22,47;UBERON:0000344,4.47e-16,15;UBERON:0001242,8.42e-13,13;UBERON:0001262,8.42e-13,13;UBERON:0004786,8.42e-13,13;UBERON:0004923,3.80e-09,24;UBERON:0002113,1.09e-08,14;UBERON:0003918,1.09e-08,14;UBERON:0011143,1.09e-08,14;UBERON:0005095,1.09e-08,14;UBERON:0007687,1.09e-08,14;UBERON:0003350,1.86e-08,9;UBERON:0004808,1.86e-08,9;UBERON:0001277,1.86e-08,9;UBERON:0001007,4.07e-07,116;UBERON:0001555,4.07e-07,116;UBERON:0007026,4.07e-07,116;UBERON:0004119,6.77e-07,118;UBERON:0000925,6.77e-07,118;UBERON:0006595,6.77e-07,118;UBERON:0000485,8.78e-07,11 | |||
|phase1_expression=0,11.5161884520989,12.739978702907,31.7587421872172,50.0895729946347,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,4.47978783821539,3.21172993494038,14.9300310669905,9.90752591165872,6.67960821326256,8.36103045608045,13.6096270070363,0,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,4.45317130904334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9038220854358,0,0,0,0,0,0,0.173824320192276,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.4247589876552,11.6358249331959,0,0,1.54640953586512,3.83198696784351,7.33847544688072,8.94060442729028,20.404749646414,13.1759163779209,5.27803938480566,3.97912944082302,1.36474860983384,25.1669434423182,17.0749059401008,18.9184209591649,0.189667900953082,0.114248512609729,2.25415471346161,1.62921062276251,1.93952487167626,1.96380295692892,4.61626721007078,11.0707610984702,21.0378295307442,18.8797660800355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0,0,0,20.4036585640896,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0.50695859978048,0.188626341386076,0.280924522409647,0.320125762024346,0.574354689556133,1.42888107384922,0.463537303779422,0.192909220463705,0,0.588795680537589,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0.338458431566706,0.914639864363863,0.263069711437843,0.407412341537585,0,0,0.197008964751127,0,0.619747364743864,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p2@Slc5a11 | |||
}} |
Revision as of 04:18, 4 August 2015
Short description: | p2@Slc5a11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc5a11_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_NM_146198, uc009jpg.1, uc009jph.1_5end |
EntrezGene: | 233836 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.58e-13 | 6 |
gut absorptive cell | 4.58e-13 | 6 |
enterocyte | 4.58e-13 | 6 |
columnar/cuboidal epithelial cell | 4.32e-11 | 7 |
intestinal epithelial cell | 1.86e-08 | 9 |
epithelial cell of alimentary canal | 1.86e-08 | 9 |
M cell of gut | 1.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.50e-37 | 31 |
gastrointestinal system | 1.86e-22 | 47 |
mucosa | 4.47e-16 | 15 |
intestinal mucosa | 8.42e-13 | 13 |
wall of intestine | 8.42e-13 | 13 |
gastrointestinal system mucosa | 8.42e-13 | 13 |
organ component layer | 3.80e-09 | 24 |
kidney | 1.09e-08 | 14 |
kidney mesenchyme | 1.09e-08 | 14 |
upper urinary tract | 1.09e-08 | 14 |
kidney rudiment | 1.09e-08 | 14 |
kidney field | 1.09e-08 | 14 |
epithelium of mucosa | 1.86e-08 | 9 |
gastrointestinal system epithelium | 1.86e-08 | 9 |
intestinal epithelium | 1.86e-08 | 9 |
digestive system | 4.07e-07 | 116 |
digestive tract | 4.07e-07 | 116 |
primitive gut | 4.07e-07 | 116 |
endoderm-derived structure | 6.77e-07 | 118 |
endoderm | 6.77e-07 | 118 |
presumptive endoderm | 6.77e-07 | 118 |
simple columnar epithelium | 8.78e-07 | 11 |