FFCP PHASE1:Mm9::chr7:121989818..121989837,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=410 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:121989818..121989837,+ | |||
|description=CAGE_peak_at_chr7:121989818..121989837,+ | |description=CAGE_peak_at_chr7:121989818..121989837,+ | ||
|id=chr7:121989818..121989837,+ | |id=chr7:121989818..121989837,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.21e-22!9;CL:0002251!1.21e-22!9;CL:0000239!4.40e-15!6;CL:0000677!4.40e-15!6;CL:0000212!4.40e-15!6;CL:0000584!4.40e-15!6;CL:0000066!3.44e-13!25;CL:0002076!6.81e-13!15;CL:0000075!7.86e-13!7;CL:0000473!2.96e-09!3;CL:0000627!2.96e-09!3;CL:0000682!2.96e-09!3;CL:0000223!3.05e-09!20;CL:0002250!3.78e-09!3 | |ontology_enrichment_celltype=CL:0002563!1.21e-22!9;CL:0002251!1.21e-22!9;CL:0000239!4.40e-15!6;CL:0000677!4.40e-15!6;CL:0000212!4.40e-15!6;CL:0000584!4.40e-15!6;CL:0000066!3.44e-13!25;CL:0002076!6.81e-13!15;CL:0000075!7.86e-13!7;CL:0000473!2.96e-09!3;CL:0000627!2.96e-09!3;CL:0000682!2.96e-09!3;CL:0000223!3.05e-09!20;CL:0002250!3.78e-09!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.29e-24,9;CL:0002251,5.29e-24,9;CL:0000066,2.12e-15,25;CL:0000239,3.82e-14,6;CL:0000677,3.82e-14,6;CL:0000584,3.82e-14,6;CL:0002076,6.12e-14,15;CL:0000075,4.28e-12,7;CL:0000682,7.03e-12,3;CL:0002250,9.75e-12,3;CL:0000223,3.69e-10,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.28e-37!43;UBERON:0000344!2.29e-37!15;UBERON:0001242!2.94e-32!13;UBERON:0000060!2.94e-32!13;UBERON:0001262!2.94e-32!13;UBERON:0004786!2.94e-32!13;UBERON:0005409!4.31e-28!59;UBERON:0003350!1.21e-22!9;UBERON:0004808!1.21e-22!9;UBERON:0001277!1.21e-22!9;UBERON:0004923!5.08e-22!24;UBERON:0000485!3.27e-18!11;UBERON:0001007!7.34e-12!128;UBERON:0001555!7.34e-12!128;UBERON:0007026!7.34e-12!128;UBERON:0004119!1.40e-11!130;UBERON:0000925!1.40e-11!130;UBERON:0006595!1.40e-11!130;UBERON:0004921!6.66e-10!126;UBERON:0004185!6.66e-10!126;UBERON:0000331!5.78e-09!3;UBERON:0002116!5.78e-09!3;UBERON:0001204!5.78e-09!3;UBERON:0001168!5.78e-09!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.42e-43,15;UBERON:0000160,1.18e-40,31;UBERON:0001242,8.84e-37,13;UBERON:0001262,8.84e-37,13;UBERON:0004786,8.84e-37,13;UBERON:0005409,2.08e-28,47;UBERON:0004923,3.12e-26,24;UBERON:0003350,5.29e-24,9;UBERON:0004808,5.29e-24,9;UBERON:0001277,5.29e-24,9;UBERON:0000485,1.97e-19,11;UBERON:0002108,3.16e-14,4;UBERON:0001007,1.06e-11,116;UBERON:0001555,1.06e-11,116;UBERON:0007026,1.06e-11,116;UBERON:0000331,1.72e-11,3;UBERON:0002116,1.72e-11,3;UBERON:0001204,1.72e-11,3;UBERON:0001168,1.72e-11,3;UBERON:0004119,1.97e-11,118;UBERON:0000925,1.97e-11,118;UBERON:0006595,1.97e-11,118;UBERON:0004921,2.08e-09,114;UBERON:0001962,2.89e-08,2;UBERON:0001961,2.89e-08,2;UBERON:0001744,2.89e-08,2;UBERON:0001155,8.88e-08,2;UBERON:0000059,8.88e-08,2 | |||
|phase1_expression=0,3.83872948403297,4.09499315450582,0.90739263392049,1.00179145989269,2.51818907867835,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,5.04700418347774,4.59385571292016,8.61523992318149,7.11055067863434,4.94060890586572,3.2763916868791,9.5344119581781,0,0,0,4.33277429626912,5.81821258754723,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.58670339998127,0,0,0.128867461322093,0,0,0,1.89811624617805,0.329397909448022,0.754005626400808,0.596869416123452,0.58489226135736,1.79763881730844,5.40345124686736,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85152941241944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.83872948403297,4.09499315450582,0.90739263392049,1.00179145989269,2.51818907867835,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,5.04700418347774,4.59385571292016,8.61523992318149,7.11055067863434,4.94060890586572,3.2763916868791,9.5344119581781,0,0,0,4.33277429626912,5.81821258754723,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.58670339998127,0,0,0.128867461322093,0,0,0,1.89811624617805,0.329397909448022,0.754005626400808,0.596869416123452,0.58489226135736,1.79763881730844,5.40345124686736,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85152941241944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:121989818..121989837,+ | |short_description=p@chr7:121989818..121989837,+ | ||
}} | }} |
Latest revision as of 02:20, 4 August 2015
Short description: | p@chr7:121989818..121989837, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:121989818..121989837, + |
Coexpression cluster: | MCL_coexpression_mm9:410 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.29e-24 | 9 |
epithelial cell of alimentary canal | 5.29e-24 | 9 |
epithelial cell | 2.12e-15 | 25 |
brush border epithelial cell | 3.82e-14 | 6 |
gut absorptive cell | 3.82e-14 | 6 |
enterocyte | 3.82e-14 | 6 |
endo-epithelial cell | 6.12e-14 | 15 |
columnar/cuboidal epithelial cell | 4.28e-12 | 7 |
M cell of gut | 7.03e-12 | 3 |
intestinal crypt stem cell | 9.75e-12 | 3 |
endodermal cell | 3.69e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.42e-43 | 15 |
intestine | 1.18e-40 | 31 |
intestinal mucosa | 8.84e-37 | 13 |
wall of intestine | 8.84e-37 | 13 |
gastrointestinal system mucosa | 8.84e-37 | 13 |
gastrointestinal system | 2.08e-28 | 47 |
organ component layer | 3.12e-26 | 24 |
epithelium of mucosa | 5.29e-24 | 9 |
gastrointestinal system epithelium | 5.29e-24 | 9 |
intestinal epithelium | 5.29e-24 | 9 |
simple columnar epithelium | 1.97e-19 | 11 |
small intestine | 3.16e-14 | 4 |
digestive system | 1.06e-11 | 116 |
digestive tract | 1.06e-11 | 116 |
primitive gut | 1.06e-11 | 116 |
ileal mucosa | 1.72e-11 | 3 |
ileum | 1.72e-11 | 3 |
mucosa of small intestine | 1.72e-11 | 3 |
wall of small intestine | 1.72e-11 | 3 |
endoderm-derived structure | 1.97e-11 | 118 |
endoderm | 1.97e-11 | 118 |
presumptive endoderm | 1.97e-11 | 118 |
subdivision of digestive tract | 2.08e-09 | 114 |
gut-associated lymphoid tissue | 2.89e-08 | 2 |
mucosa-associated lymphoid tissue | 2.89e-08 | 2 |
lymphoid tissue | 2.89e-08 | 2 |
colon | 8.88e-08 | 2 |
large intestine | 8.88e-08 | 2 |