FFCP PHASE1:Mm9::chr10:126512385..126512454,+: Difference between revisions
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|id=chr10:126512385..126512454,+
|short_description=p@chr10:126512385..126512454,+
|description=CAGE_peak_at_chr10:126512385..126512454,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=633 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:126512385..126512454,+ | |||
|description=CAGE_peak_at_chr10:126512385..126512454,+ | |||
|id=chr10:126512385..126512454,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.72e-11!32;CL:0002032!5.72e-11!32;CL:0000037!5.72e-11!32;CL:0000566!5.72e-11!32;CL:0000837!5.72e-11!32;CL:0000838!1.35e-09!12;CL:0000084!5.51e-09!11;CL:0000827!5.51e-09!11;CL:0000542!1.79e-08!13;CL:0000051!1.79e-08!13;CL:0002031!2.84e-08!25;CL:0000791!9.78e-08!9;CL:0000789!9.78e-08!9;CL:0002420!9.78e-08!9;CL:0002419!9.78e-08!9;CL:0000790!9.78e-08!9;CL:0000624!7.24e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.87e-18,32;CL:0002032,5.87e-18,32;CL:0000037,5.87e-18,32;CL:0000837,5.87e-18,32;CL:0000838,1.60e-14,12;CL:0002031,2.05e-13,25;CL:0000542,3.14e-13,13;CL:0000051,3.14e-13,13;CL:0000084,3.53e-13,11;CL:0000827,3.53e-13,11;CL:0002320,6.00e-11,46;CL:0000134,6.00e-11,46;CL:0000791,1.87e-10,9;CL:0000789,1.87e-10,9;CL:0002420,1.87e-10,9;CL:0002419,1.87e-10,9;CL:0000790,1.87e-10,9;CL:0000738,1.38e-09,17;CL:0002087,1.38e-09,17;CL:0000624,1.12e-08,8;CL:0000219,1.31e-08,54;CL:0000049,4.66e-07,19;CL:0000553,5.31e-07,6;CL:0000556,5.31e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.46e-18!48;UBERON:0002390!1.20e-16!45;UBERON:0003061!1.20e-16!45;UBERON:0002405!3.78e-16!70;UBERON:0004177!9.00e-16!29;UBERON:0006562!6.62e-13!24;UBERON:0001557!6.62e-13!24;UBERON:0001042!6.62e-13!24;UBERON:0008814!6.62e-13!24;UBERON:0009145!6.62e-13!24;UBERON:0002370!9.03e-13!23;UBERON:0000974!9.03e-13!23;UBERON:0004807!9.03e-13!23;UBERON:0005058!9.03e-13!23;UBERON:0003351!9.03e-13!23;UBERON:0009113!9.03e-13!23;UBERON:0003295!9.03e-13!23;UBERON:0009722!9.03e-13!23;UBERON:0005562!9.03e-13!23;UBERON:0007690!9.03e-13!23;UBERON:0005057!3.14e-12!51;UBERON:0003408!7.39e-12!24;UBERON:0000072!1.92e-10!27;UBERON:0000065!5.86e-10!41;UBERON:0001004!1.86e-09!42;UBERON:0000077!3.47e-08!97;UBERON:0001041!3.77e-08!92;UBERON:0001007!4.17e-07!128;UBERON:0001555!4.17e-07!128;UBERON:0007026!4.17e-07!128;UBERON:0004119!4.22e-07!130;UBERON:0000925!4.22e-07!130;UBERON:0006595!4.22e-07!130;UBERON:0003081!5.58e-07!88;UBERON:0000063!5.59e-07!35;UBERON:0002368!6.59e-07!60;UBERON:0000949!7.89e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.82e-26,48;UBERON:0002405,2.82e-26,48;UBERON:0002370,2.91e-24,23;UBERON:0000974,2.91e-24,23;UBERON:0004807,2.91e-24,23;UBERON:0005058,2.91e-24,23;UBERON:0003351,2.91e-24,23;UBERON:0009113,2.91e-24,23;UBERON:0003295,2.91e-24,23;UBERON:0009722,2.91e-24,23;UBERON:0005562,2.91e-24,23;UBERON:0007690,2.91e-24,23;UBERON:0002390,3.57e-24,45;UBERON:0003061,3.57e-24,45;UBERON:0006562,4.84e-23,24;UBERON:0003408,4.84e-23,24;UBERON:0001557,4.84e-23,24;UBERON:0001042,4.84e-23,24;UBERON:0008814,4.84e-23,24;UBERON:0009145,4.84e-23,24;UBERON:0004177,2.27e-22,29;UBERON:0005057,2.27e-22,29;UBERON:0000072,6.33e-20,27;UBERON:0000077,1.35e-17,35;UBERON:0007811,1.02e-13,36;UBERON:0000065,1.83e-11,41;UBERON:0001004,4.43e-11,42;UBERON:0002384,6.00e-11,46;UBERON:0000153,1.03e-10,43;UBERON:0003081,3.75e-09,87;UBERON:0003929,2.69e-08,55;UBERON:0000490,6.48e-08,66;UBERON:0002368,3.22e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,10.4589891987677,3.51971805379167,5.61754863172784,0.34243593645101,0.8774937489487,8.04643430676667,11.0149707047937,0.333109761815663,1.41732687172878,1.39912375625629,2.68142840554502,2.74228867211478,3.39511721438424,0.255129870453209,2.08510997521859,2.61199789138935,1.27993938234725,0.68822784320151,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,2.51118978442145,0,6.28228492768558,2.35292595212406,4.09827290975067,5.82612423637384,0,0,0,0,0,0,0,0,0,2.18117387875057,4.35217285206807,12.4354705682712,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0.227178579999552,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,11.1343289968284,0.742210695324124,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0,0.289198713839823,0.884610551949874,0.161766849947409,0.662524555381181,0,0,0,0,0.766371165625774,3.47463861067169,1.19980546198682,2.54140454146129,0,0,0,0,0,0,0,0,0.746441823660558,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,2.05878325691772,0.852490498186778,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,2.31293148088659,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.608580364165509,0.964708639009667,0.25462585178142,0.287696137450811,0.162135226775035,0,0,1.11642284300551,0.312037673114561,0,0.179397413521912,0.482443521363367,0.554259570499814,0,0,0,0,0.167506257441816,0,0.390267295715598,0.157635144106191,0.664394068946325,0.159454768657487,0.655453258862952,0.690739927463582,0.289298117163023,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.49465875882444,0.161464426695906,0,0,0,0,0.18542530201051,1.70870880797853,0.412773735926445,0.925972636848558,0.753473828018764,1.0935538217682,0.686334519619568,17.8477351493548,22.3922323717853,20.3153961492503,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0.209718688851422,0,0.288030006257865,7.2682557744481,1.82452693761148,2.97861775777999,3.37794139742267,5.54982756569192,7.15252877212554,7.81270421879797,8.56599257612548,9.18794694528143,7.92550789211998,8.67105192176829,8.77120926657772,8.37043022270866,10.2851673919781,0.226730383615211,0,0,0,0.19318959403219,0.750729901804728,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0.187283014939765,0,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0.526139422875686,0,0.561142271657738,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,10.4589891987677,3.51971805379167,5.61754863172784,0.34243593645101,0.8774937489487,8.04643430676667,11.0149707047937,0.333109761815663,1.41732687172878,1.39912375625629,2.68142840554502,2.74228867211478,3.39511721438424,0.255129870453209,2.08510997521859,2.61199789138935,1.27993938234725,0.68822784320151,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,2.51118978442145,0,6.28228492768558,2.35292595212406,4.09827290975067,5.82612423637384,0,0,0,0,0,0,0,0,0,2.18117387875057,4.35217285206807,12.4354705682712,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0.227178579999552,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,11.1343289968284,0.742210695324124,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0,0.289198713839823,0.884610551949874,0.161766849947409,0.662524555381181,0,0,0,0,0.766371165625774,3.47463861067169,1.19980546198682,2.54140454146129,0,0,0,0,0,0,0,0,0.746441823660558,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,2.05878325691772,0.852490498186778,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,2.31293148088659,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.608580364165509,0.964708639009667,0.25462585178142,0.287696137450811,0.162135226775035,0,0,1.11642284300551,0.312037673114561,0,0.179397413521912,0.482443521363367,0.554259570499814,0,0,0,0,0.167506257441816,0,0.390267295715598,0.157635144106191,0.664394068946325,0.159454768657487,0.655453258862952,0.690739927463582,0.289298117163023,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.49465875882444,0.161464426695906,0,0,0,0,0.18542530201051,1.70870880797853,0.412773735926445,0.925972636848558,0.753473828018764,1.0935538217682,0.686334519619568,17.8477351493548,22.3922323717853,20.3153961492503,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0.209718688851422,0,0.288030006257865,7.2682557744481,1.82452693761148,2.97861775777999,3.37794139742267,5.54982756569192,7.15252877212554,7.81270421879797,8.56599257612548,9.18794694528143,7.92550789211998,8.67105192176829,8.77120926657772,8.37043022270866,10.2851673919781,0.226730383615211,0,0,0,0.19318959403219,0.750729901804728,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0.187283014939765,0,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0.526139422875686,0,0.561142271657738,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr10:126512385..126512454,+ | |||
}} | }} |
Latest revision as of 00:39, 4 August 2015
Short description: | p@chr10:126512385..126512454, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126512385..126512454, + |
Coexpression cluster: | MCL_coexpression_mm9:633 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.87e-18 | 32 |
hematopoietic oligopotent progenitor cell | 5.87e-18 | 32 |
hematopoietic stem cell | 5.87e-18 | 32 |
hematopoietic multipotent progenitor cell | 5.87e-18 | 32 |
lymphoid lineage restricted progenitor cell | 1.60e-14 | 12 |
hematopoietic lineage restricted progenitor cell | 2.05e-13 | 25 |
lymphocyte | 3.14e-13 | 13 |
common lymphoid progenitor | 3.14e-13 | 13 |
T cell | 3.53e-13 | 11 |
pro-T cell | 3.53e-13 | 11 |
connective tissue cell | 6.00e-11 | 46 |
mesenchymal cell | 6.00e-11 | 46 |
mature alpha-beta T cell | 1.87e-10 | 9 |
alpha-beta T cell | 1.87e-10 | 9 |
immature T cell | 1.87e-10 | 9 |
mature T cell | 1.87e-10 | 9 |
immature alpha-beta T cell | 1.87e-10 | 9 |
leukocyte | 1.38e-09 | 17 |
nongranular leukocyte | 1.38e-09 | 17 |
CD4-positive, alpha-beta T cell | 1.12e-08 | 8 |
motile cell | 1.31e-08 | 54 |
common myeloid progenitor | 4.66e-07 | 19 |
megakaryocyte progenitor cell | 5.31e-07 | 6 |
megakaryocyte | 5.31e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.82e-26 | 48 |
immune system | 2.82e-26 | 48 |
thymus | 2.91e-24 | 23 |
neck | 2.91e-24 | 23 |
respiratory system epithelium | 2.91e-24 | 23 |
hemolymphoid system gland | 2.91e-24 | 23 |
pharyngeal epithelium | 2.91e-24 | 23 |
thymic region | 2.91e-24 | 23 |
pharyngeal gland | 2.91e-24 | 23 |
entire pharyngeal arch endoderm | 2.91e-24 | 23 |
thymus primordium | 2.91e-24 | 23 |
early pharyngeal endoderm | 2.91e-24 | 23 |
hematopoietic system | 3.57e-24 | 45 |
blood island | 3.57e-24 | 45 |
pharynx | 4.84e-23 | 24 |
gland of gut | 4.84e-23 | 24 |
upper respiratory tract | 4.84e-23 | 24 |
chordate pharynx | 4.84e-23 | 24 |
pharyngeal arch system | 4.84e-23 | 24 |
pharyngeal region of foregut | 4.84e-23 | 24 |
hemopoietic organ | 2.27e-22 | 29 |
immune organ | 2.27e-22 | 29 |
segment of respiratory tract | 6.33e-20 | 27 |
mixed endoderm/mesoderm-derived structure | 1.35e-17 | 35 |
craniocervical region | 1.02e-13 | 36 |
respiratory tract | 1.83e-11 | 41 |
respiratory system | 4.43e-11 | 42 |
connective tissue | 6.00e-11 | 46 |
anterior region of body | 1.03e-10 | 43 |
lateral plate mesoderm | 3.75e-09 | 87 |
gut epithelium | 2.69e-08 | 55 |
unilaminar epithelium | 6.48e-08 | 66 |
endocrine gland | 3.22e-07 | 60 |