FFCP PHASE1:Mm9::chr5:143573837..143573852,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=424 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:143573837..143573852,+ | |||
|description=CAGE_peak_at_chr5:143573837..143573852,+ | |description=CAGE_peak_at_chr5:143573837..143573852,+ | ||
|id=chr5:143573837..143573852,+ | |id=chr5:143573837..143573852,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.21e-13!9;CL:0002251!3.21e-13!9;CL:0000239!2.91e-12!6;CL:0000677!2.91e-12!6;CL:0000212!2.91e-12!6;CL:0000584!2.91e-12!6;CL:0000075!2.22e-10!7;CL:0000066!1.30e-07!25;CL:0002076!2.62e-07!15;CL:0000473!4.27e-07!3;CL:0000627!4.27e-07!3;CL:0000682!4.27e-07!3 | |ontology_enrichment_celltype=CL:0002563!3.21e-13!9;CL:0002251!3.21e-13!9;CL:0000239!2.91e-12!6;CL:0000677!2.91e-12!6;CL:0000212!2.91e-12!6;CL:0000584!2.91e-12!6;CL:0000075!2.22e-10!7;CL:0000066!1.30e-07!25;CL:0002076!2.62e-07!15;CL:0000473!4.27e-07!3;CL:0000627!4.27e-07!3;CL:0000682!4.27e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.00e-21,6;CL:0000677,5.00e-21,6;CL:0000584,5.00e-21,6;CL:0000075,5.89e-18,7;CL:0002563,7.44e-14,9;CL:0002251,7.44e-14,9;CL:0000682,1.23e-11,3;CL:0000066,2.65e-10,25;CL:0002076,4.27e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.98e-25!15;UBERON:0001242!9.25e-21!13;UBERON:0000060!9.25e-21!13;UBERON:0001262!9.25e-21!13;UBERON:0004786!9.25e-21!13;UBERON:0004923!1.54e-18!24;UBERON:0000160!1.11e-17!43;UBERON:0003350!3.21e-13!9;UBERON:0004808!3.21e-13!9;UBERON:0001277!3.21e-13!9;UBERON:0005409!1.21e-12!59;UBERON:0000485!1.58e-10!11;UBERON:0000331!2.95e-07!3;UBERON:0002116!2.95e-07!3;UBERON:0001204!2.95e-07!3;UBERON:0001168!2.95e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.48e-38,31;UBERON:0000344,1.78e-33,15;UBERON:0005409,7.05e-27,47;UBERON:0001242,1.57e-26,13;UBERON:0001262,1.57e-26,13;UBERON:0004786,1.57e-26,13;UBERON:0004923,4.23e-20,24;UBERON:0002108,7.84e-15,4;UBERON:0003350,7.44e-14,9;UBERON:0004808,7.44e-14,9;UBERON:0001277,7.44e-14,9;UBERON:0000331,6.31e-12,3;UBERON:0002116,6.31e-12,3;UBERON:0001204,6.31e-12,3;UBERON:0001168,6.31e-12,3;UBERON:0001007,2.92e-11,116;UBERON:0001555,2.92e-11,116;UBERON:0007026,2.92e-11,116;UBERON:0000485,3.06e-11,11;UBERON:0004119,5.30e-11,118;UBERON:0000925,5.30e-11,118;UBERON:0006595,5.30e-11,118;UBERON:0004921,6.42e-09,114;UBERON:0001962,6.99e-09,2;UBERON:0001961,6.99e-09,2;UBERON:0001744,6.99e-09,2;UBERON:0001155,1.17e-08,2;UBERON:0000059,1.17e-08,2 | |||
|phase1_expression=0,7.67745896806594,2.72999543633722,1.81478526784098,2.50447864973174,2.51818907867835,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91971964335605,6.42345986988076,3.44539178469012,2.15380998079537,3.44753972297422,3.04037471130198,3.2763916868791,5.09980174507201,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0.741584903203122,0,0,0,0,0,9.31958806090611,0.292780797011547,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,3.96502539580558,1.05780226665418,0,0,0,0,0,0,1.89811624617805,0,1.00534083520108,0,0.19496408711912,1.79763881730844,1.94524244887225,3.58454291857861,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0,0,0,0,0.328281799490123,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,7.67745896806594,2.72999543633722,1.81478526784098,2.50447864973174,2.51818907867835,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91971964335605,6.42345986988076,3.44539178469012,2.15380998079537,3.44753972297422,3.04037471130198,3.2763916868791,5.09980174507201,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0.741584903203122,0,0,0,0,0,9.31958806090611,0.292780797011547,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,3.96502539580558,1.05780226665418,0,0,0,0,0,0,1.89811624617805,0,1.00534083520108,0,0.19496408711912,1.79763881730844,1.94524244887225,3.58454291857861,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0,0,0,0,0.328281799490123,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr5:143573837..143573852,+ | |short_description=p@chr5:143573837..143573852,+ | ||
}} | }} |
Latest revision as of 00:03, 4 August 2015
Short description: | p@chr5:143573837..143573852, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:143573837..143573852, + |
Coexpression cluster: | MCL_coexpression_mm9:424 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.00e-21 | 6 |
gut absorptive cell | 5.00e-21 | 6 |
enterocyte | 5.00e-21 | 6 |
columnar/cuboidal epithelial cell | 5.89e-18 | 7 |
intestinal epithelial cell | 7.44e-14 | 9 |
epithelial cell of alimentary canal | 7.44e-14 | 9 |
M cell of gut | 1.23e-11 | 3 |
epithelial cell | 2.65e-10 | 25 |
endo-epithelial cell | 4.27e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.48e-38 | 31 |
mucosa | 1.78e-33 | 15 |
gastrointestinal system | 7.05e-27 | 47 |
intestinal mucosa | 1.57e-26 | 13 |
wall of intestine | 1.57e-26 | 13 |
gastrointestinal system mucosa | 1.57e-26 | 13 |
organ component layer | 4.23e-20 | 24 |
small intestine | 7.84e-15 | 4 |
epithelium of mucosa | 7.44e-14 | 9 |
gastrointestinal system epithelium | 7.44e-14 | 9 |
intestinal epithelium | 7.44e-14 | 9 |
ileal mucosa | 6.31e-12 | 3 |
ileum | 6.31e-12 | 3 |
mucosa of small intestine | 6.31e-12 | 3 |
wall of small intestine | 6.31e-12 | 3 |
digestive system | 2.92e-11 | 116 |
digestive tract | 2.92e-11 | 116 |
primitive gut | 2.92e-11 | 116 |
simple columnar epithelium | 3.06e-11 | 11 |
endoderm-derived structure | 5.30e-11 | 118 |
endoderm | 5.30e-11 | 118 |
presumptive endoderm | 5.30e-11 | 118 |
subdivision of digestive tract | 6.42e-09 | 114 |
gut-associated lymphoid tissue | 6.99e-09 | 2 |
mucosa-associated lymphoid tissue | 6.99e-09 | 2 |
lymphoid tissue | 6.99e-09 | 2 |
colon | 1.17e-08 | 2 |
large intestine | 1.17e-08 | 2 |