FFCP PHASE1:Mm9::chr10:120947386..120947401,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=175 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:120947386..120947401,+ | |||
|description=CAGE_peak_at_chr10:120947386..120947401,+ | |description=CAGE_peak_at_chr10:120947386..120947401,+ | ||
|id=chr10:120947386..120947401,+ | |id=chr10:120947386..120947401,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.40e-10,6;CL:0000677,2.40e-10,6;CL:0000584,2.40e-10,6;CL:0000075,9.87e-09,7;CL:0000066,8.26e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.84e-15!130;UBERON:0000925!4.84e-15!130;UBERON:0006595!4.84e-15!130;UBERON:0001007!4.05e-14!128;UBERON:0001555!4.05e-14!128;UBERON:0007026!4.05e-14!128;UBERON:0004921!4.40e-13!126;UBERON:0004185!4.40e-13!126;UBERON:0002107!5.19e-11!22;UBERON:0007499!5.19e-11!22;UBERON:0006925!5.19e-11!22;UBERON:0009497!5.19e-11!22;UBERON:0000015!5.19e-11!22;UBERON:0002423!5.19e-11!22;UBERON:0006235!5.19e-11!22;UBERON:0008835!5.19e-11!22;UBERON:0003894!5.19e-11!22;UBERON:0004161!5.19e-11!22;UBERON:0008836!5.19e-11!22;UBERON:0000160!2.57e-10!43;UBERON:0009854!4.78e-10!23;UBERON:0009856!4.78e-10!23;UBERON:0002365!1.24e-09!25;UBERON:0002330!1.24e-09!25;UBERON:0005409!4.32e-08!59;UBERON:0000344!3.13e-07!15;UBERON:0005911!5.61e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.15e-14,118;UBERON:0000925,2.15e-14,118;UBERON:0006595,2.15e-14,118;UBERON:0001007,1.18e-13,116;UBERON:0001555,1.18e-13,116;UBERON:0007026,1.18e-13,116;UBERON:0002107,1.89e-13,22;UBERON:0007499,1.89e-13,22;UBERON:0006925,1.89e-13,22;UBERON:0009497,1.89e-13,22;UBERON:0000015,1.89e-13,22;UBERON:0002423,1.89e-13,22;UBERON:0006235,1.89e-13,22;UBERON:0008835,1.89e-13,22;UBERON:0003894,1.89e-13,22;UBERON:0004161,1.89e-13,22;UBERON:0008836,1.89e-13,22;UBERON:0002365,5.90e-13,25;UBERON:0002330,5.90e-13,25;UBERON:0000160,1.05e-12,31;UBERON:0009854,1.07e-12,23;UBERON:0009856,1.07e-12,23;UBERON:0004921,5.02e-12,114;UBERON:0000344,7.95e-10,15;UBERON:0005409,1.18e-08,47;UBERON:0003929,3.35e-08,55;UBERON:0004923,6.39e-08,24;UBERON:0005911,8.09e-08,69;UBERON:0001242,2.16e-07,13;UBERON:0001262,2.16e-07,13;UBERON:0004786,2.16e-07,13 | |||
|phase1_expression=0.160148847104794,8.37540978334467,7.73498706962211,3.93203474698879,5.50985302940982,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,5.27974995218242,2.52350209173887,4.59385571292016,1.7230479846363,3.01659725760245,1.71021077510736,0.756090389279792,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.453429360640713,0.579728977403356,2.58127163094416,0,15.6513925574967,5.84798775702902,7.6164570806547,0.983110940922263,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.48439043634778,0,0.29688427812965,0.520455980298408,0.913396434936424,0.461230994512117,0.452167921657868,0.470354828542819,0.125666591329675,1.48316980640624,0,0,0,0.220841518460394,0,0,0,0,4.08731288333746,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,4.8401626853889,0.130120442962704,0.459804208866946,0,0.150704817835715,0,0.12811372028485,0,1.55222022443409,0.215567992932842,0.378212160335639,0.703804496655795,0.876782929710299,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,2.27838349789052,2.81431271977315,0.36012412292203,0.710234206755631,0.196764231747404,0.462801338662135,0.232533944750408,0,0.233530684734339,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,0,0,3.63460661282178,5.28901133327089,0.639864751605702,0.696710015581316,0.77320476793256,0.201683524623343,1.11189021922435,0.760902504450237,1.42358718463353,1.31759163779209,1.00534083520108,0.397912944082302,0.974820435595601,2.69645822596266,3.24207074812041,1.99141273254367,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0.246794327843601,0.889357881261447,0.667380422864376,1.37591296579242,0.674586337154561,0.811440485554012,0.241177159752417,0.763877555344259,2.87696137450811,9.72811360650212,5.76578967694971,2.87536413054709,14.1413560114031,3.74445207737473,11.36604950762,3.58794827043824,18.332853811808,3.51031061316549,0.37898282354097,0,0,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0.221464689648775,0.159454768657487,0.983179888294428,1.38147985492716,1.44649058581512,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0.445597348164788,0,0,0.292255857911312,0,0,0,0.712262414669021,0.488660878060728,0.329940245945071,1.32745138339963,1.45668381692989,0.906970670894253,0.188605079755898,0,0.614870295887855,0.775284879504663,0.727067458955011,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0,0,0,0.704015124191131,15.0400770313312,0.220528398054962,0,0.484393280087717,0.120625849856312,0.835606408021955,0.328281799490123,1.1659233465194,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0,0.655087691238533,1.21377911746339,0.661227645802687,0.26175594198403,1.03691978633434,1.24267862617385,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0.51968329191118,0,0.39736270956253,0.360586348559907,0,0.302899349844443,0.0762068066549998,0.100826185136841,0.487289403698762,0.384847366561318,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0.399024873401031,0.512200817262403,1.45864030240976,0.419226325255965,1.10306105070008,0.44449345560323,0,0.320919209591815,1.01078884705519,0.760437899670719,0.188626341386076,0.187283014939765,0.832326981263301,0.34461281373368,0,0.231768651889711,0.77163688185482,0.412085900803307,0,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.752875043322645,0.761531471025089,0.73171189149109,1.05227884575137,0.407412341537585,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.77468420592983,0.964533054905707,0.249810577937946,0.935726433781634,1.50409737833809,0.382576664137687,0.220591419119515,0 | |phase1_expression=0.160148847104794,8.37540978334467,7.73498706962211,3.93203474698879,5.50985302940982,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,5.27974995218242,2.52350209173887,4.59385571292016,1.7230479846363,3.01659725760245,1.71021077510736,0.756090389279792,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.453429360640713,0.579728977403356,2.58127163094416,0,15.6513925574967,5.84798775702902,7.6164570806547,0.983110940922263,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.48439043634778,0,0.29688427812965,0.520455980298408,0.913396434936424,0.461230994512117,0.452167921657868,0.470354828542819,0.125666591329675,1.48316980640624,0,0,0,0.220841518460394,0,0,0,0,4.08731288333746,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,4.8401626853889,0.130120442962704,0.459804208866946,0,0.150704817835715,0,0.12811372028485,0,1.55222022443409,0.215567992932842,0.378212160335639,0.703804496655795,0.876782929710299,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,2.27838349789052,2.81431271977315,0.36012412292203,0.710234206755631,0.196764231747404,0.462801338662135,0.232533944750408,0,0.233530684734339,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,0,0,3.63460661282178,5.28901133327089,0.639864751605702,0.696710015581316,0.77320476793256,0.201683524623343,1.11189021922435,0.760902504450237,1.42358718463353,1.31759163779209,1.00534083520108,0.397912944082302,0.974820435595601,2.69645822596266,3.24207074812041,1.99141273254367,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0.246794327843601,0.889357881261447,0.667380422864376,1.37591296579242,0.674586337154561,0.811440485554012,0.241177159752417,0.763877555344259,2.87696137450811,9.72811360650212,5.76578967694971,2.87536413054709,14.1413560114031,3.74445207737473,11.36604950762,3.58794827043824,18.332853811808,3.51031061316549,0.37898282354097,0,0,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0.221464689648775,0.159454768657487,0.983179888294428,1.38147985492716,1.44649058581512,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0.445597348164788,0,0,0.292255857911312,0,0,0,0.712262414669021,0.488660878060728,0.329940245945071,1.32745138339963,1.45668381692989,0.906970670894253,0.188605079755898,0,0.614870295887855,0.775284879504663,0.727067458955011,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0,0,0,0.704015124191131,15.0400770313312,0.220528398054962,0,0.484393280087717,0.120625849856312,0.835606408021955,0.328281799490123,1.1659233465194,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0,0.655087691238533,1.21377911746339,0.661227645802687,0.26175594198403,1.03691978633434,1.24267862617385,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0.51968329191118,0,0.39736270956253,0.360586348559907,0,0.302899349844443,0.0762068066549998,0.100826185136841,0.487289403698762,0.384847366561318,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0.399024873401031,0.512200817262403,1.45864030240976,0.419226325255965,1.10306105070008,0.44449345560323,0,0.320919209591815,1.01078884705519,0.760437899670719,0.188626341386076,0.187283014939765,0.832326981263301,0.34461281373368,0,0.231768651889711,0.77163688185482,0.412085900803307,0,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.752875043322645,0.761531471025089,0.73171189149109,1.05227884575137,0.407412341537585,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.77468420592983,0.964533054905707,0.249810577937946,0.935726433781634,1.50409737833809,0.382576664137687,0.220591419119515,0 | ||
|short_description=p@chr10:120947386..120947401,+ | |short_description=p@chr10:120947386..120947401,+ | ||
}} | }} |
Latest revision as of 23:42, 3 August 2015
Short description: | p@chr10:120947386..120947401, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:120947386..120947401, + |
Coexpression cluster: | MCL_coexpression_mm9:175 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.40e-10 | 6 |
gut absorptive cell | 2.40e-10 | 6 |
enterocyte | 2.40e-10 | 6 |
columnar/cuboidal epithelial cell | 9.87e-09 | 7 |
epithelial cell | 8.26e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.15e-14 | 118 |
endoderm | 2.15e-14 | 118 |
presumptive endoderm | 2.15e-14 | 118 |
digestive system | 1.18e-13 | 116 |
digestive tract | 1.18e-13 | 116 |
primitive gut | 1.18e-13 | 116 |
liver | 1.89e-13 | 22 |
epithelial sac | 1.89e-13 | 22 |
digestive gland | 1.89e-13 | 22 |
epithelium of foregut-midgut junction | 1.89e-13 | 22 |
anatomical boundary | 1.89e-13 | 22 |
hepatobiliary system | 1.89e-13 | 22 |
foregut-midgut junction | 1.89e-13 | 22 |
hepatic diverticulum | 1.89e-13 | 22 |
liver primordium | 1.89e-13 | 22 |
septum transversum | 1.89e-13 | 22 |
liver bud | 1.89e-13 | 22 |
exocrine gland | 5.90e-13 | 25 |
exocrine system | 5.90e-13 | 25 |
intestine | 1.05e-12 | 31 |
digestive tract diverticulum | 1.07e-12 | 23 |
sac | 1.07e-12 | 23 |
subdivision of digestive tract | 5.02e-12 | 114 |
mucosa | 7.95e-10 | 15 |
gastrointestinal system | 1.18e-08 | 47 |
gut epithelium | 3.35e-08 | 55 |
organ component layer | 6.39e-08 | 24 |
endo-epithelium | 8.09e-08 | 69 |
intestinal mucosa | 2.16e-07 | 13 |
wall of intestine | 2.16e-07 | 13 |
gastrointestinal system mucosa | 2.16e-07 | 13 |