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FFCP PHASE1:Mm9::chr16:52034044..52034050,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=102
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr16:52034044..52034050,+
|description=CAGE_peak_at_chr16:52034044..52034050,+
|description=CAGE_peak_at_chr16:52034044..52034050,+
|id=chr16:52034044..52034050,+
|id=chr16:52034044..52034050,+
|ontology_enrichment_celltype=CL:0000791!1.21e-07!9;CL:0000789!1.21e-07!9;CL:0002420!1.21e-07!9;CL:0002419!1.21e-07!9;CL:0000790!1.21e-07!9;CL:0000624!5.24e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,2.77e-17,9;CL:0000789,2.77e-17,9;CL:0002420,2.77e-17,9;CL:0002419,2.77e-17,9;CL:0000790,2.77e-17,9;CL:0000624,1.20e-15,8;CL:0000838,2.16e-15,12;CL:0000542,5.33e-14,13;CL:0000051,5.33e-14,13;CL:0000084,1.02e-13,11;CL:0000827,1.02e-13,11;CL:0000893,3.30e-12,6;CL:0002489,3.30e-12,6;CL:0000898,3.30e-12,6;CL:0000809,3.30e-12,6;CL:0000810,3.30e-12,6;CL:0000895,3.30e-12,6;CL:0000808,3.30e-12,6;CL:0000894,3.30e-12,6;CL:0000806,3.30e-12,6;CL:0000807,3.30e-12,6;CL:0000805,3.30e-12,6;CL:0002425,3.30e-12,6;CL:0002436,3.30e-12,6;CL:0002427,3.30e-12,6;CL:0002428,3.30e-12,6;CL:0002429,3.30e-12,6;CL:0002433,3.30e-12,6;CL:0002431,3.30e-12,6;CL:0002432,3.30e-12,6;CL:0002031,3.67e-12,25;CL:0000738,4.44e-12,17;CL:0002087,4.44e-12,17;CL:0000988,1.15e-08,32;CL:0002032,1.15e-08,32;CL:0000037,1.15e-08,32;CL:0000837,1.15e-08,32
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001048!4.37e-09!147;UBERON:0001004!2.26e-07!42;UBERON:0000065!5.46e-07!41;UBERON:0000926!8.34e-07!193;UBERON:0004120!8.34e-07!193;UBERON:0006603!8.34e-07!193
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.72e-11,42;UBERON:0000065,1.89e-10,41;UBERON:0004177,5.86e-10,29;UBERON:0005057,5.86e-10,29;UBERON:0003408,2.42e-09,24;UBERON:0002390,3.05e-09,45;UBERON:0003061,3.05e-09,45;UBERON:0002370,1.96e-08,23;UBERON:0000974,1.96e-08,23;UBERON:0004807,1.96e-08,23;UBERON:0005058,1.96e-08,23;UBERON:0003351,1.96e-08,23;UBERON:0009113,1.96e-08,23;UBERON:0003295,1.96e-08,23;UBERON:0009722,1.96e-08,23;UBERON:0005562,1.96e-08,23;UBERON:0007690,1.96e-08,23;UBERON:0002193,2.31e-08,48;UBERON:0002405,2.31e-08,48;UBERON:0006562,5.78e-08,24;UBERON:0001557,5.78e-08,24;UBERON:0001042,5.78e-08,24;UBERON:0008814,5.78e-08,24;UBERON:0009145,5.78e-08,24;UBERON:0001041,7.62e-08,80;UBERON:0000077,1.29e-07,35;UBERON:0000072,9.04e-07,27
|phase1_expression=0.160148847104794,0.348975407639361,0,0.60492842261366,0,0,0,5.81054955487093,10.98152032783,5.61754863172784,6.67750076079469,3.03134204182278,7.87523357683546,8.47977903464275,0,0.202475267389826,0,2.05050407482854,2.19383093769182,1.69755860719212,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0,0,0,0,3.18786951509699,2.90144856804538,2.35265659399725,0.514518872071894,0,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,0,0,0.725827286159344,0.135005938331691,0.210324961351382,0,0.220868540951614,0.367472397644862,0.0958454710182364,0,0,0.127687338085188,0.46081959976873,0,0,0.52091337055676,0,0.56276261003168,0.45839474333043,0,0.142371680799103,0.745597783301202,0.151452386666368,0.226714680320357,0.869593466105033,0.860423876981386,0,0,0,0,0.140444420131752,0,0.779358013808606,1.06001872353102,0.422530259330042,0,0,0,0.216491041011214,0.760079596425296,0,0.68510327831436,0.517875767294343,0.742210695324124,0,0,0.691846491768175,0.60289056221049,0.352766121407114,0.125666591329675,0.741584903203122,1.01219549843938,1.76922110389975,0.647067399789637,0.441683036920787,0,0,0.878342391034642,0.628340120440365,0.255457055208591,0.599075622529601,0,0.254140454146129,0.449371918214468,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0,0.101839363850316,1.49288364732112,0.505445516867349,0,0.780722657776222,0.459804208866946,0,0.90422890701429,0.680364991513279,0.640568601424249,0.562210347358373,1.55222022443409,0.862271971731369,0.378212160335639,0.879755620819744,0.219195732427575,0.834141747676794,0.348252166522167,0.823128545631774,0.796137067273973,0,0,0.284163499395593,0,0.469052119962192,0.720248245844059,0.23674473558521,1.37734962223183,1.3884040159864,0.930135779001631,0.268273401399619,0.583826711835847,0.822799249567402,0.985004784474571,0.56748166682099,0.877199924551994,0.658650345873152,0.939444931322602,0,0.411618449517138,0.330418782983798,0.528901133327089,0.853153002140936,0.928946687441754,0.128867461322093,0.201683524623343,0.667134131534611,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,2.69645822596266,0,0.199141273254367,0,0.685491075658373,0,1.01825663922657,0.387904974335251,0.841629838683823,1.26473074248515,0.442830443938806,0.784993639206874,0.987177311374404,0,0.333690211432188,0,0,0,0.241177159752417,0.25462585178142,0.863088412352432,0.486405680325106,0.549122826376163,0,0,0.624075346229121,0.252578877947112,0.179397413521912,2.41221760681684,0.923765950833023,0.189491411770485,0,1.35796068620151,0.469380496577004,0.502518772325447,0.952174563544055,1.36593553500459,2.20689201748667,1.32878813789265,2.23236676120482,0.983179888294428,1.20879487306127,1.88043776155965,1.50791283939272,0.54390568381871,1.96705709207614,0.551873492609465,0.160550589987792,0.234423373184406,0.163934945376675,1.76729649043061,0.94652465824877,0.780877488593277,0.430846795465598,0.955875191810208,0.445597348164788,0.566153061577665,0,0.584511715822624,0.790575555893047,0,0.141940085208269,0.534196811001766,0.325773918707152,0.494910368917606,0,0,0.302323556964751,1.32023555829129,0,0.614870295887855,0.516856586336442,1.09060118843252,0.712994756769443,0.948110273807448,1.05418608574999,2.06271086496374,0.680879211507576,0.18006109403131,0,0.214337035031592,0.532020700926821,0.535106452806212,1.64549020602121,0.608929898229199,0.469343416127421,0,0,0.16488625294148,0.645857706783622,0.663442174209714,0.596861720015682,1.31312719796049,0.291480836629851,0,1.19609616558497,0.619160603889667,0.370389054739423,1.69531611304222,2.05041341581538,0.457556346413045,1.18984900995699,0,0.138199973804424,0.954670618015114,0.316335993581135,0.203319467126849,0.216010681643603,1.88179466413022,0.218362563746178,0.944050424693745,0.495920734352016,0.26175594198403,1.42576470620972,1.24267862617385,0,0.448549638131936,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0.352071715937262,0.5208175393758,0.419437377702843,0.966336483304024,0.864090018773596,0.316011120628178,1.21635129174099,1.02710957164827,1.81889152168913,0.895133478337407,0.39736270956253,0.961563596159751,1.18151621739662,0.302899349844443,0.990688486514998,1.41156659191577,0.194915761479505,0.577271049841977,1.16876902181569,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.386379188064381,0.187682475451182,0.549454872801795,0.643105137237198,0,0,1.84130094602871,0,0.171853182343688,0,0,2.02506750069542,0.45032120322422,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0.44449345560323,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,0.468207537349412,0.384150914429216,0.574354689556133,0,0.811190281613988,0.38581844092741,0,0.294397840268795,0.685738504770831,0.70990322463735,0.953744759789284,0.14534641663232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|phase1_expression=0.160148847104794,0.348975407639361,0,0.60492842261366,0,0,0,5.81054955487093,10.98152032783,5.61754863172784,6.67750076079469,3.03134204182278,7.87523357683546,8.47977903464275,0,0.202475267389826,0,2.05050407482854,2.19383093769182,1.69755860719212,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0,0,0,0,3.18786951509699,2.90144856804538,2.35265659399725,0.514518872071894,0,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,0,0,0.725827286159344,0.135005938331691,0.210324961351382,0,0.220868540951614,0.367472397644862,0.0958454710182364,0,0,0.127687338085188,0.46081959976873,0,0,0.52091337055676,0,0.56276261003168,0.45839474333043,0,0.142371680799103,0.745597783301202,0.151452386666368,0.226714680320357,0.869593466105033,0.860423876981386,0,0,0,0,0.140444420131752,0,0.779358013808606,1.06001872353102,0.422530259330042,0,0,0,0.216491041011214,0.760079596425296,0,0.68510327831436,0.517875767294343,0.742210695324124,0,0,0.691846491768175,0.60289056221049,0.352766121407114,0.125666591329675,0.741584903203122,1.01219549843938,1.76922110389975,0.647067399789637,0.441683036920787,0,0,0.878342391034642,0.628340120440365,0.255457055208591,0.599075622529601,0,0.254140454146129,0.449371918214468,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0,0.101839363850316,1.49288364732112,0.505445516867349,0,0.780722657776222,0.459804208866946,0,0.90422890701429,0.680364991513279,0.640568601424249,0.562210347358373,1.55222022443409,0.862271971731369,0.378212160335639,0.879755620819744,0.219195732427575,0.834141747676794,0.348252166522167,0.823128545631774,0.796137067273973,0,0,0.284163499395593,0,0.469052119962192,0.720248245844059,0.23674473558521,1.37734962223183,1.3884040159864,0.930135779001631,0.268273401399619,0.583826711835847,0.822799249567402,0.985004784474571,0.56748166682099,0.877199924551994,0.658650345873152,0.939444931322602,0,0.411618449517138,0.330418782983798,0.528901133327089,0.853153002140936,0.928946687441754,0.128867461322093,0.201683524623343,0.667134131534611,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,2.69645822596266,0,0.199141273254367,0,0.685491075658373,0,1.01825663922657,0.387904974335251,0.841629838683823,1.26473074248515,0.442830443938806,0.784993639206874,0.987177311374404,0,0.333690211432188,0,0,0,0.241177159752417,0.25462585178142,0.863088412352432,0.486405680325106,0.549122826376163,0,0,0.624075346229121,0.252578877947112,0.179397413521912,2.41221760681684,0.923765950833023,0.189491411770485,0,1.35796068620151,0.469380496577004,0.502518772325447,0.952174563544055,1.36593553500459,2.20689201748667,1.32878813789265,2.23236676120482,0.983179888294428,1.20879487306127,1.88043776155965,1.50791283939272,0.54390568381871,1.96705709207614,0.551873492609465,0.160550589987792,0.234423373184406,0.163934945376675,1.76729649043061,0.94652465824877,0.780877488593277,0.430846795465598,0.955875191810208,0.445597348164788,0.566153061577665,0,0.584511715822624,0.790575555893047,0,0.141940085208269,0.534196811001766,0.325773918707152,0.494910368917606,0,0,0.302323556964751,1.32023555829129,0,0.614870295887855,0.516856586336442,1.09060118843252,0.712994756769443,0.948110273807448,1.05418608574999,2.06271086496374,0.680879211507576,0.18006109403131,0,0.214337035031592,0.532020700926821,0.535106452806212,1.64549020602121,0.608929898229199,0.469343416127421,0,0,0.16488625294148,0.645857706783622,0.663442174209714,0.596861720015682,1.31312719796049,0.291480836629851,0,1.19609616558497,0.619160603889667,0.370389054739423,1.69531611304222,2.05041341581538,0.457556346413045,1.18984900995699,0,0.138199973804424,0.954670618015114,0.316335993581135,0.203319467126849,0.216010681643603,1.88179466413022,0.218362563746178,0.944050424693745,0.495920734352016,0.26175594198403,1.42576470620972,1.24267862617385,0,0.448549638131936,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0.352071715937262,0.5208175393758,0.419437377702843,0.966336483304024,0.864090018773596,0.316011120628178,1.21635129174099,1.02710957164827,1.81889152168913,0.895133478337407,0.39736270956253,0.961563596159751,1.18151621739662,0.302899349844443,0.990688486514998,1.41156659191577,0.194915761479505,0.577271049841977,1.16876902181569,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.386379188064381,0.187682475451182,0.549454872801795,0.643105137237198,0,0,1.84130094602871,0,0.171853182343688,0,0,2.02506750069542,0.45032120322422,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0.44449345560323,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,0.468207537349412,0.384150914429216,0.574354689556133,0,0.811190281613988,0.38581844092741,0,0.294397840268795,0.685738504770831,0.70990322463735,0.953744759789284,0.14534641663232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|short_description=p@chr16:52034044..52034050,+
|short_description=p@chr16:52034044..52034050,+
}}
}}

Latest revision as of 22:44, 3 August 2015

Short description:p@chr16:52034044..52034050, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr16:52034044..52034050, +
Coexpression cluster:MCL_coexpression_mm9:102
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr16:52034044..52034050+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.03
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.48
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell2.77e-179
alpha-beta T cell2.77e-179
immature T cell2.77e-179
mature T cell2.77e-179
immature alpha-beta T cell2.77e-179
CD4-positive, alpha-beta T cell1.20e-158
lymphoid lineage restricted progenitor cell2.16e-1512
lymphocyte5.33e-1413
common lymphoid progenitor5.33e-1413
T cell1.02e-1311
pro-T cell1.02e-1311
thymocyte3.30e-126
double negative thymocyte3.30e-126
naive T cell3.30e-126
double-positive, alpha-beta thymocyte3.30e-126
CD4-positive, alpha-beta thymocyte3.30e-126
naive thymus-derived CD4-positive, alpha-beta T cell3.30e-126
DN4 thymocyte3.30e-126
DN1 thymic pro-T cell3.30e-126
DN2 thymocyte3.30e-126
DN3 thymocyte3.30e-126
immature single positive thymocyte3.30e-126
early T lineage precursor3.30e-126
mature CD4 single-positive thymocyte3.30e-126
resting double-positive thymocyte3.30e-126
double-positive blast3.30e-126
CD69-positive double-positive thymocyte3.30e-126
CD69-positive, CD4-positive single-positive thymocyte3.30e-126
CD4-positive, CD8-intermediate double-positive thymocyte3.30e-126
CD24-positive, CD4 single-positive thymocyte3.30e-126
hematopoietic lineage restricted progenitor cell3.67e-1225
leukocyte4.44e-1217
nongranular leukocyte4.44e-1217
hematopoietic cell1.15e-0832
hematopoietic oligopotent progenitor cell1.15e-0832
hematopoietic stem cell1.15e-0832
hematopoietic multipotent progenitor cell1.15e-0832

Uber anatomy
Ontology termp-valuen
respiratory system2.72e-1142
respiratory tract1.89e-1041
hemopoietic organ5.86e-1029
immune organ5.86e-1029
gland of gut2.42e-0924
hematopoietic system3.05e-0945
blood island3.05e-0945
thymus1.96e-0823
neck1.96e-0823
respiratory system epithelium1.96e-0823
hemolymphoid system gland1.96e-0823
pharyngeal epithelium1.96e-0823
thymic region1.96e-0823
pharyngeal gland1.96e-0823
entire pharyngeal arch endoderm1.96e-0823
thymus primordium1.96e-0823
early pharyngeal endoderm1.96e-0823
hemolymphoid system2.31e-0848
immune system2.31e-0848
pharynx5.78e-0824
upper respiratory tract5.78e-0824
chordate pharynx5.78e-0824
pharyngeal arch system5.78e-0824
pharyngeal region of foregut5.78e-0824
foregut7.62e-0880
mixed endoderm/mesoderm-derived structure1.29e-0735
segment of respiratory tract9.04e-0727
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