FFCP PHASE1:Mm9::chr14:102240091..102240101,+: Difference between revisions
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{{FFCP|EntrezGene=380928|HGNC=|MCL_coexpression_id=24|UniProt=|association_with_transcript=55bp_to_ENSMUST00000159948_5end|description=CAGE_peak_19_at_Lmo7_5end|id=chr14:102240091..102240101,+|ontology_enrichment_celltype=CL:0002563!6.56e-13!9;CL:0002251!6.56e-13!9;CL:0000239!1.99e-09!6;CL:0000677!1.99e-09!6;CL:0000212!1.99e-09!6;CL:0000584!1.99e-09!6;CL:0000066!1.22e-08!25;CL:0002076!3.31e-08!15;CL:0000075!6.72e-08!7|ontology_enrichment_celltype_v019_2=CL:0002563,8.34e-22,9;CL:0002251,8.34e-22,9;CL:0000239,4.44e-14,6;CL:0000677,4.44e-14,6;CL:0000584,4.44e-14,6;CL:0000066,1.02e-13,25;CL:0002076,1.39e-12,15;CL:0000075,5.07e-12,7;CL:0000682,1.04e-10,3;CL:0002250,2.35e-09,3;CL:0000223,4.01e-09,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.74e-25!43;UBERON:0000344!6.60e-21!15;UBERON:0005409!1.22e-19!59;UBERON:0001242!2.63e-18!13;UBERON:0000060!2.63e-18!13;UBERON:0001262!2.63e-18!13;UBERON:0004786!2.63e-18!13;UBERON:0003350!6.56e-13!9;UBERON:0004808!6.56e-13!9;UBERON:0001277!6.56e-13!9;UBERON:0004923!1.02e-12!24;UBERON:0000485!4.15e-10!11;UBERON:0001007!2.96e-08!128;UBERON:0001555!2.96e-08!128;UBERON:0007026!2.96e-08!128;UBERON:0004119!5.90e-08!130;UBERON:0000925!5.90e-08!130;UBERON:0006595!5.90e-08!130;UBERON:0004921!4.00e-07!126;UBERON:0004185!4.00e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.64e-40,31;UBERON:0000344,1.58e-39,15;UBERON:0001242,9.84e-34,13;UBERON:0001262,9.84e-34,13;UBERON:0004786,9.84e-34,13;UBERON:0005409,4.38e-28,47;UBERON:0004923,1.27e-23,24;UBERON:0003350,8.34e-22,9;UBERON:0004808,8.34e-22,9;UBERON:0001277,8.34e-22,9;UBERON:0000485,1.29e-17,11;UBERON:0002108,8.20e-13,4;UBERON:0001007,5.17e-11,116;UBERON:0001555,5.17e-11,116;UBERON:0007026,5.17e-11,116;UBERON:0004119,9.57e-11,118;UBERON:0000925,9.57e-11,118;UBERON:0006595,9.57e-11,118;UBERON:0000331,2.32e-10,3;UBERON:0002116,2.32e-10,3;UBERON:0001204,2.32e-10,3;UBERON:0001168,2.32e-10,3;UBERON:0004921,5.67e-09,114;UBERON:0001962,3.00e-07,2;UBERON:0001961,3.00e-07,2;UBERON:0001744,3.00e-07,2;UBERON:0001155,7.50e-07,2;UBERON:0000059,7.50e-07,2|phase1_expression=0,10.1202868215415,8.64498554840118,11.4936400296595,11.0197060588196,2.18243053485457,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83981814704176,3.44113921600755,6.89078356938024,5.59990595006797,6.03319451520489,6.46079626151671,5.54466285471848,3.32595765982957,0,0,0,3.46621943701529,1.82858109894342,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,2.05530983494308,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,1.86391761218122,0,0,3.32094171771169,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0,0,0.205809224758569,8.26046957459495,0.793351699990633,0,0,0.128867461322093,0.403367049246685,0.889512175379481,0.570676878337677,2.84717436926707,0.988193728344065,1.25667604400135,2.38747766449381,0.779856348476481,3.59527763461689,3.24207074812041,4.77939055810481,0,0,0,0,0,0.0701358198903186,0,0.295220295959204,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41326727862668,0.26175594198403,4.14767914533737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.280924522409647,0.0640251524048693,0.229741875822453,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p19@Lmo7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:380928 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=55bp_to_ENSMUST00000159948_5end | |||
|cluster_id=chr14:102240091..102240101,+ | |||
|description=CAGE_peak_19_at_Lmo7_5end | |||
|id=chr14:102240091..102240101,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.56e-13!9;CL:0002251!6.56e-13!9;CL:0000239!1.99e-09!6;CL:0000677!1.99e-09!6;CL:0000212!1.99e-09!6;CL:0000584!1.99e-09!6;CL:0000066!1.22e-08!25;CL:0002076!3.31e-08!15;CL:0000075!6.72e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.34e-22,9;CL:0002251,8.34e-22,9;CL:0000239,4.44e-14,6;CL:0000677,4.44e-14,6;CL:0000584,4.44e-14,6;CL:0000066,1.02e-13,25;CL:0002076,1.39e-12,15;CL:0000075,5.07e-12,7;CL:0000682,1.04e-10,3;CL:0002250,2.35e-09,3;CL:0000223,4.01e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.74e-25!43;UBERON:0000344!6.60e-21!15;UBERON:0005409!1.22e-19!59;UBERON:0001242!2.63e-18!13;UBERON:0000060!2.63e-18!13;UBERON:0001262!2.63e-18!13;UBERON:0004786!2.63e-18!13;UBERON:0003350!6.56e-13!9;UBERON:0004808!6.56e-13!9;UBERON:0001277!6.56e-13!9;UBERON:0004923!1.02e-12!24;UBERON:0000485!4.15e-10!11;UBERON:0001007!2.96e-08!128;UBERON:0001555!2.96e-08!128;UBERON:0007026!2.96e-08!128;UBERON:0004119!5.90e-08!130;UBERON:0000925!5.90e-08!130;UBERON:0006595!5.90e-08!130;UBERON:0004921!4.00e-07!126;UBERON:0004185!4.00e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.64e-40,31;UBERON:0000344,1.58e-39,15;UBERON:0001242,9.84e-34,13;UBERON:0001262,9.84e-34,13;UBERON:0004786,9.84e-34,13;UBERON:0005409,4.38e-28,47;UBERON:0004923,1.27e-23,24;UBERON:0003350,8.34e-22,9;UBERON:0004808,8.34e-22,9;UBERON:0001277,8.34e-22,9;UBERON:0000485,1.29e-17,11;UBERON:0002108,8.20e-13,4;UBERON:0001007,5.17e-11,116;UBERON:0001555,5.17e-11,116;UBERON:0007026,5.17e-11,116;UBERON:0004119,9.57e-11,118;UBERON:0000925,9.57e-11,118;UBERON:0006595,9.57e-11,118;UBERON:0000331,2.32e-10,3;UBERON:0002116,2.32e-10,3;UBERON:0001204,2.32e-10,3;UBERON:0001168,2.32e-10,3;UBERON:0004921,5.67e-09,114;UBERON:0001962,3.00e-07,2;UBERON:0001961,3.00e-07,2;UBERON:0001744,3.00e-07,2;UBERON:0001155,7.50e-07,2;UBERON:0000059,7.50e-07,2 | |||
|phase1_expression=0,10.1202868215415,8.64498554840118,11.4936400296595,11.0197060588196,2.18243053485457,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83981814704176,3.44113921600755,6.89078356938024,5.59990595006797,6.03319451520489,6.46079626151671,5.54466285471848,3.32595765982957,0,0,0,3.46621943701529,1.82858109894342,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,2.05530983494308,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,1.86391761218122,0,0,3.32094171771169,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0,0,0.205809224758569,8.26046957459495,0.793351699990633,0,0,0.128867461322093,0.403367049246685,0.889512175379481,0.570676878337677,2.84717436926707,0.988193728344065,1.25667604400135,2.38747766449381,0.779856348476481,3.59527763461689,3.24207074812041,4.77939055810481,0,0,0,0,0,0.0701358198903186,0,0.295220295959204,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41326727862668,0.26175594198403,4.14767914533737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.280924522409647,0.0640251524048693,0.229741875822453,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p19@Lmo7 | |||
}} |
Revision as of 21:42, 3 August 2015
Short description: | p19@Lmo7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_Lmo7_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 55bp_to_ENSMUST00000159948_5end |
EntrezGene: | 380928 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.34e-22 | 9 |
epithelial cell of alimentary canal | 8.34e-22 | 9 |
brush border epithelial cell | 4.44e-14 | 6 |
gut absorptive cell | 4.44e-14 | 6 |
enterocyte | 4.44e-14 | 6 |
epithelial cell | 1.02e-13 | 25 |
endo-epithelial cell | 1.39e-12 | 15 |
columnar/cuboidal epithelial cell | 5.07e-12 | 7 |
M cell of gut | 1.04e-10 | 3 |
intestinal crypt stem cell | 2.35e-09 | 3 |
endodermal cell | 4.01e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.64e-40 | 31 |
mucosa | 1.58e-39 | 15 |
intestinal mucosa | 9.84e-34 | 13 |
wall of intestine | 9.84e-34 | 13 |
gastrointestinal system mucosa | 9.84e-34 | 13 |
gastrointestinal system | 4.38e-28 | 47 |
organ component layer | 1.27e-23 | 24 |
epithelium of mucosa | 8.34e-22 | 9 |
gastrointestinal system epithelium | 8.34e-22 | 9 |
intestinal epithelium | 8.34e-22 | 9 |
simple columnar epithelium | 1.29e-17 | 11 |
small intestine | 8.20e-13 | 4 |
digestive system | 5.17e-11 | 116 |
digestive tract | 5.17e-11 | 116 |
primitive gut | 5.17e-11 | 116 |
endoderm-derived structure | 9.57e-11 | 118 |
endoderm | 9.57e-11 | 118 |
presumptive endoderm | 9.57e-11 | 118 |
ileal mucosa | 2.32e-10 | 3 |
ileum | 2.32e-10 | 3 |
mucosa of small intestine | 2.32e-10 | 3 |
wall of small intestine | 2.32e-10 | 3 |
subdivision of digestive tract | 5.67e-09 | 114 |
gut-associated lymphoid tissue | 3.00e-07 | 2 |
mucosa-associated lymphoid tissue | 3.00e-07 | 2 |
lymphoid tissue | 3.00e-07 | 2 |
colon | 7.50e-07 | 2 |
large intestine | 7.50e-07 | 2 |