FFCP PHASE1:Hg19::chr9:93759317..93759323,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:93759317..93759323,+ | |||
|coexpression_cluster_id=C3747 | |coexpression_cluster_id=C3747 | ||
|description=CAGE_peak_at_chr9:93759317..93759323,+ | |description=CAGE_peak_at_chr9:93759317..93759323,+ | ||
|id=chr9:93759317..93759323,+ | |id=chr9:93759317..93759323,+ | ||
|ontology_enrichment_celltype=CL:0000499!3.37e-09!27;CL:0000153!1.34e-08!9;CL:0000447!1.34e-08!9;CL:0000144!1.67e-07!625;CL:0002371!2.05e-07!591;CL:0000569!4.26e-07!4;CL:0000011!4.26e-07!4;CL:0000667!6.98e-07!6;CL:0000058!6.98e-07!6;CL:0000138!6.98e-07!6;CL:0002320!9.59e-07!365 | |ontology_enrichment_celltype=CL:0000499!3.37e-09!27;CL:0000153!1.34e-08!9;CL:0000447!1.34e-08!9;CL:0000144!1.67e-07!625;CL:0002371!2.05e-07!591;CL:0000569!4.26e-07!4;CL:0000011!4.26e-07!4;CL:0000667!6.98e-07!6;CL:0000058!6.98e-07!6;CL:0000138!6.98e-07!6;CL:0002320!9.59e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0002570;3.04e-15;8!CL:0000153;6.71e-14;9!CL:0000447;6.71e-14;9!CL:0002602;5.82e-11;2!CL:0002540;8.78e-09;6!CL:0000327;3.08e-08;15!CL:0000134;3.16e-08;55!CL:0000214;3.85e-08;3!CL:0000499;4.76e-08;28!CL:0000138;7.97e-08;6!CL:0000048;9.85e-08;58!CL:0002564;1.13e-07;3!CL:0002166;1.38e-07;3!CL:0000723;1.43e-07;61!CL:0000034;4.28e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,1.95e-15,8;CL:0000153,5.70e-14,9;CL:0000447,5.70e-14,9;CL:0002602,4.08e-11,2;CL:0002540,8.79e-09,6;CL:0000327,2.80e-08,15;CL:0000214,3.92e-08,3;CL:0000499,4.39e-08,28;CL:0000058,6.82e-08,6;CL:0000138,6.82e-08,6;CL:0002166,1.43e-07,3;CL:0002564,1.48e-07,3;CL:0002320,6.24e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.02e-07!375;UBERON:0002090!7.24e-07!6 | |ontology_enrichment_uberon=UBERON:0002384!1.02e-07!375;UBERON:0002090!7.24e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;1.29e-22;8!UBERON:0000982;1.29e-22;8!UBERON:0004770;1.29e-22;8!UBERON:0011135;2.76e-16;5!UBERON:0002216;2.76e-16;5!UBERON:0011134;2.76e-16;5!UBERON:0002209;2.76e-16;5!UBERON:0002213;2.76e-16;5!UBERON:0007844;2.76e-16;5!UBERON:0011138;2.76e-16;5!UBERON:0001130;2.76e-16;5!UBERON:0001066;2.76e-16;5!UBERON:0001468;2.76e-16;5!UBERON:0004765;1.66e-14;26!UBERON:0001434;1.50e-12;36!UBERON:0006444;5.82e-11;2!UBERON:0001995;5.82e-11;2!UBERON:0004715;5.82e-11;2!UBERON:0000075;9.99e-11;16!UBERON:0001013;1.29e-08;14!UBERON:0006915;3.85e-08;3!UBERON:0007616;3.85e-08;3!UBERON:0002217;3.85e-08;3!UBERON:0002018;3.85e-08;3!UBERON:0002242;1.13e-07;3!UBERON:0002418;1.38e-07;3!UBERON:0004755;1.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,1.36e-22,8;UBERON:0000982,1.36e-22,8;UBERON:0004770,1.36e-22,8;UBERON:0011135,2.88e-16,5;UBERON:0002216,2.88e-16,5;UBERON:0011134,2.88e-16,5;UBERON:0002209,2.88e-16,5;UBERON:0002213,2.88e-16,5;UBERON:0005856,2.88e-16,5;UBERON:0005866,2.88e-16,5;UBERON:0005863,2.88e-16,5;UBERON:0007844,2.88e-16,5;UBERON:0011138,2.88e-16,5;UBERON:0001130,2.88e-16,5;UBERON:0001066,2.88e-16,5;UBERON:0001468,2.88e-16,5;UBERON:0006444,4.08e-11,2;UBERON:0001995,4.08e-11,2;UBERON:0004715,4.08e-11,2;UBERON:0000075,1.04e-10,16;UBERON:0001013,1.01e-08,14;UBERON:0006915,3.92e-08,3;UBERON:0007616,3.92e-08,3;UBERON:0002217,3.92e-08,3;UBERON:0002018,3.92e-08,3;UBERON:0002418,1.09e-07,3;UBERON:0004755,1.09e-07,3;UBERON:0002242,1.48e-07,3;UBERON:0003068,1.48e-07,3;UBERON:0002328,1.48e-07,3;UBERON:0004880,1.48e-07,3;UBERON:0002384,2.63e-07,371 | |||
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| ||
|short_description=p@chr9:93759317..93759323,+ | |short_description=p@chr9:93759317..93759323,+ | ||
}} | }} |
Latest revision as of 03:27, 1 August 2015
Short description: | p@chr9:93759317..93759323, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:93759317..93759323, + |
Coexpression cluster: | C3747_mesenchymal_tenocyte_Synoviocyte_myxofibrosarcoma_Hep2_cervix_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 1.95e-15 | 8 |
GAG secreting cell | 5.70e-14 | 9 |
carbohydrate secreting cell | 5.70e-14 | 9 |
annulus pulposus cell | 4.08e-11 | 2 |
mesenchymal stem cell of the bone marrow | 8.79e-09 | 6 |
extracellular matrix secreting cell | 2.80e-08 | 15 |
synovial cell | 3.92e-08 | 3 |
stromal cell | 4.39e-08 | 28 |
chondroblast | 6.82e-08 | 6 |
chondrocyte | 6.82e-08 | 6 |
epithelial cell of Malassez | 1.43e-07 | 3 |
nucleus pulposus cell of intervertebral disc | 1.48e-07 | 3 |
connective tissue cell | 6.24e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
articulation | 1.36e-22 | 8 |
skeletal joint | 1.36e-22 | 8 |
articular system | 1.36e-22 | 8 |
intervertebral cartilage | 2.88e-16 | 5 |
symphysis | 2.88e-16 | 5 |
nonsynovial joint | 2.88e-16 | 5 |
fibrous joint | 2.88e-16 | 5 |
cartilaginous joint | 2.88e-16 | 5 |
developing mesenchymal condensation | 2.88e-16 | 5 |
pre-cartilage condensation | 2.88e-16 | 5 |
cartilaginous condensation | 2.88e-16 | 5 |
cartilage element | 2.88e-16 | 5 |
post-cranial axial skeletal system | 2.88e-16 | 5 |
vertebral column | 2.88e-16 | 5 |
intervertebral disk | 2.88e-16 | 5 |
intervertebral joint | 2.88e-16 | 5 |
annulus fibrosus | 4.08e-11 | 2 |
fibrocartilage | 4.08e-11 | 2 |
annulus fibrosus disci intervertebralis | 4.08e-11 | 2 |
subdivision of skeletal system | 1.04e-10 | 16 |
adipose tissue | 1.01e-08 | 14 |
stratified squamous epithelium | 3.92e-08 | 3 |
layer of synovial tissue | 3.92e-08 | 3 |
synovial joint | 3.92e-08 | 3 |
synovial membrane of synovial joint | 3.92e-08 | 3 |
cartilage tissue | 1.09e-07 | 3 |
skeletal tissue | 1.09e-07 | 3 |
nucleus pulposus | 1.48e-07 | 3 |
axial mesoderm | 1.48e-07 | 3 |
notochord | 1.48e-07 | 3 |
chordamesoderm | 1.48e-07 | 3 |
connective tissue | 2.63e-07 | 371 |