FFCP PHASE1:Hg19::chr9:38068437..38068455,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:38068437..38068455,- to FFCP PHASE1:Hg19::chr9:38068437..38068455,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=228bp_to_ENST00000540557_5end | |||
|cluster_id=chr9:38068437..38068455,- | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_3_at_ENST00000540557_5end | |||
|id=chr9:38068437..38068455,- | |||
|ontology_enrichment_celltype=CL:0000183!2.84e-09!59;CL:0000055!3.71e-09!180;CL:0002321!3.18e-08!248;CL:0000220!3.62e-08!246;CL:0000187!1.05e-07!54;CL:0000680!1.45e-07!57;CL:0000056!1.45e-07!57;CL:0000355!1.45e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000669;4.27e-17;4!CL:0002603;2.36e-13;3!CL:0002575;6.80e-10;2!CL:1000507;9.29e-10;10!CL:1000494;9.29e-10;10!CL:0000306;1.56e-09;4!CL:0002222;1.56e-09;4!CL:0002224;1.56e-09;4!CL:0002554;2.46e-09;2!CL:0000650;6.20e-09;2!CL:1000500;6.20e-09;2!CL:1000618;6.20e-09;2!CL:1001318;6.20e-09;2!CL:0002173;6.20e-09;2!CL:0002367;6.20e-09;2!CL:0002564;7.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,5.55e-17,4;CL:0002603,2.15e-13,3;CL:0002575,6.29e-10,2;CL:1000507,1.17e-09,10;CL:1000494,1.17e-09,10;CL:0000306,1.37e-09,4;CL:0002222,1.37e-09,4;CL:0002224,1.37e-09,4;CL:0002554,2.24e-09,2;CL:0000650,8.61e-09,2;CL:1000500,8.61e-09,2;CL:1000618,8.61e-09,2;CL:1001318,8.61e-09,2;CL:0002173,8.61e-09,2;CL:0002367,1.76e-08,2;CL:0002564,8.03e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.66e-14!312;UBERON:0000475!2.07e-13!365;UBERON:0000483!2.16e-13!309;UBERON:0000481!3.04e-12!347;UBERON:0000468!7.46e-11!659;UBERON:0000477!4.42e-10!286;UBERON:0000467!7.84e-08!625;UBERON:0000480!1.08e-07!626;UBERON:0000923!1.22e-07!604;UBERON:0005291!1.22e-07!604;UBERON:0006598!1.22e-07!604;UBERON:0002532!1.22e-07!604;UBERON:0000922!1.58e-07!612;UBERON:0002050!1.67e-07!605;UBERON:0005423!1.67e-07!605;UBERON:0000914!3.73e-07!83;UBERON:0002329!3.73e-07!83;UBERON:0003077!3.73e-07!83;UBERON:0003059!3.73e-07!83;UBERON:0007282!3.73e-07!83;UBERON:0009618!3.73e-07!83;UBERON:0007285!3.73e-07!83;UBERON:0000033!5.04e-07!123;UBERON:0000486!6.02e-07!82;UBERON:0005256!7.50e-07!143;UBERON:0002385!7.56e-07!63;UBERON:0001015!7.56e-07!63;UBERON:0000383!7.56e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001801;5.11e-13;14!UBERON:0004211;9.29e-10;10!UBERON:0009773;9.29e-10;10!UBERON:0001231;9.29e-10;10!UBERON:0004810;9.29e-10;10!UBERON:0010077;1.56e-09;4!UBERON:0005389;1.56e-09;4!UBERON:0000484;1.56e-09;4!UBERON:0000965;1.56e-09;4!UBERON:0001803;1.56e-09;4!UBERON:0000019;2.41e-09;19!UBERON:0000047;2.41e-09;19!UBERON:0004088;2.41e-09;19!UBERON:0010230;2.41e-09;19!UBERON:0003567;6.20e-09;2!UBERON:0003838;6.20e-09;2!UBERON:0003586;6.20e-09;2!UBERON:0005169;6.20e-09;2!UBERON:0002321;6.20e-09;2!UBERON:0005969;6.20e-09;2!UBERON:0005215;6.20e-09;2!UBERON:0002303;6.20e-09;2!UBERON:0002319;6.20e-09;2!UBERON:0003956;6.20e-09;2!UBERON:0000970;7.89e-09;20!UBERON:0011135;1.70e-08;5!UBERON:0002216;1.70e-08;5!UBERON:0011134;1.70e-08;5!UBERON:0002209;1.70e-08;5!UBERON:0002213;1.70e-08;5!UBERON:0007844;1.70e-08;5!UBERON:0011138;1.70e-08;5!UBERON:0001130;1.70e-08;5!UBERON:0001066;1.70e-08;5!UBERON:0001468;1.70e-08;5!UBERON:0002104;2.30e-08;21!UBERON:0001456;2.30e-08;21!UBERON:0000020;1.48e-07;23!UBERON:0001032;3.34e-07;24!UBERON:0004456;3.34e-07;24!UBERON:0002037;7.05e-07;6!UBERON:0002242;7.77e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001801,5.31e-13,14;UBERON:0004810,1.17e-09,10;UBERON:0010077,1.37e-09,4;UBERON:0005389,1.37e-09,4;UBERON:0000484,1.37e-09,4;UBERON:0002546,1.37e-09,4;UBERON:0000965,1.37e-09,4;UBERON:0001803,1.37e-09,4;UBERON:0003073,1.37e-09,4;UBERON:0005426,1.37e-09,4;UBERON:0005085,7.77e-09,31;UBERON:0000019,8.10e-09,20;UBERON:0000047,8.10e-09,20;UBERON:0010312,8.10e-09,20;UBERON:0004088,8.10e-09,20;UBERON:0010230,8.10e-09,20;UBERON:0003072,8.10e-09,20;UBERON:0004128,8.10e-09,20;UBERON:0003071,8.10e-09,20;UBERON:0003567,8.61e-09,2;UBERON:0003838,8.61e-09,2;UBERON:0003586,8.61e-09,2;UBERON:0005169,8.61e-09,2;UBERON:0002321,8.61e-09,2;UBERON:0005215,8.61e-09,2;UBERON:0002303,8.61e-09,2;UBERON:0002319,8.61e-09,2;UBERON:0011135,1.71e-08,5;UBERON:0002216,1.71e-08,5;UBERON:0011134,1.71e-08,5;UBERON:0002209,1.71e-08,5;UBERON:0002213,1.71e-08,5;UBERON:0005856,1.71e-08,5;UBERON:0005866,1.71e-08,5;UBERON:0005863,1.71e-08,5;UBERON:0007844,1.71e-08,5;UBERON:0011138,1.71e-08,5;UBERON:0001130,1.71e-08,5;UBERON:0001066,1.71e-08,5;UBERON:0001468,1.71e-08,5;UBERON:0005969,1.76e-08,2;UBERON:0003956,1.76e-08,2;UBERON:0000970,2.36e-08,21;UBERON:0002104,2.36e-08,21;UBERON:0001456,6.23e-08,22;UBERON:0000020,3.41e-07,24;UBERON:0001032,3.41e-07,24;UBERON:0004456,3.41e-07,24;UBERON:0002037,6.74e-07,6;UBERON:0006215,6.74e-07,6;UBERON:0002242,8.03e-07,3;UBERON:0003068,8.03e-07,3;UBERON:0002328,8.03e-07,3;UBERON:0004880,8.03e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0.655324116390517,0.263766978228454,2.35156070624089,0.662794751455832,0.672325146451775,0.602694528023977,0,0,1.60057375499824,2.04000691244253,2.19418305034661,0.85870796139317,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0.361439152384566,0,0.579386075843295,0,0,0.756278537312543,1.55210578223795,0.790513071238134,0.327447688744282,1.82147644146271,0,0,0.174129737299267,0.132957960518865,0,0,0.371457501329565,0.198762407366705,0,0.694281003215189,1.69592382577203,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0.22452937262617,0.337834441449967,0,0,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0.605429710579726,0.576175924479999,2.10889288650417,0,0.570471821544449,0.448346041655403,0.939475989150119,0,0,0,0.491337269247072,0.309977343527296,0,0,2.73048408581408,1.43723628363248,0.168336113954066,0.875829639103749,0,0,0.612975591598039,0.45071417671979,0.113432183160021,0.358779271377724,0.213557388818567,0.847727604638247,0,0.309157587715317,0.515281080091258,1.30281799432113,0.168776332241266,0.389748020644795,0.757301322732344,0.460249493211497,0.323292113637624,0.710019185033229,0.403008392910561,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,1.85747171212792,0.721879481669586,0,0,0.241011029883482,0.330881918197182,0,0.237270619111097,0,0.196221465125346,0.38474715694639,0,1.40241773803446,0,2.94017422771084,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0.100528972411631,0.925884451585296,0.651616610620649,0,1.44331342025273,1.97081688457631,1.05667824812239,0,0,0.570762456703795,0.790204397959275,0,0,0,0,0.93733833986777,0,0.141775097242386,0.447792613514241,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0,0,0,0.448524337381443,0.43596006883328,0.36669142910475,0.129271715757778,21.4593867511129,0,0,0,0.771622122786426,0,0.266422179016099,0.285955987316295,1.62786481617433,0.823240336780769,0,0,0.791951872933429,0.301439377059586,0,0.099972991182057,1.2162378064119,0.502257091432126,0,0,1.14861935834114,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,2.20844685094452,4.50153468953709,0.542530047399471,0.623912584592421,0.356857977594324,0.157702415033935,0.702848489956279,0.601892199455438,0,0,0,0.921845842708516,0.60818530127658,6.46143819627044,2.40200396667599,0,0,0,0,1.66435439510497,0.604780586659361,0.496215615637554,0.460385919864187,0.841980283299221,0.128139149255701,0,0.321707842287215,0,0.771048469013278,0.532685175939381,0.246381468041427,0.519254429183621,0.232420756919918,0,0.802025881213139,0.276242966807689,0.114814448164607,0.364182336013434,0.786746489756545,0.451199612907412,0.385076685522074,0,1.46139224653261,1.05551628892876,0,0,0.431831832204279,0,1.08378575017541,1.50506932156456,0.254876273045038,1.66215201785745,0.223874754722178,0,0,0,0,0.976135183992909,0.309123034943167,0,0,0,1.30012049207304,0,0.96670718292122,0.154048617114644,0.460511024178389,0.137836572484531,1.50388342815583,0.435050081742686,0.426133137080504,0.534192213880424,0.826424576804891,0.768760269460425,0.127612712494584,0.10115778085555,0.464845549297286,0,0.6970372701606,0,0.532306030317022,0,0.37064843820784,0,0.744316738719335,0,0,0.511795582622668,0,1.59101623962968,0,0.539617372749944,0.823611089208164,0.353437207037059,0.606547444719948,1.58510321173008,0.421258456238981,1.46290121726877,0.487426979262569,1.05650146756755,0,0.707027159768564,2.26016233240486,0.551365343546124,0.66343897524122,0,0.578775534266688,1.31178950409327,0.202910376962704,0.30982349809975,0.563391205064483,0.860468113224309,0.491245205065606,0.35667105148125,0,0.633322905892992,0.987884678879706,1.13841952129715,1.04980416073495,0.0962221127255121,0,0,0.188287601553558,0,3.36942951335251,0,0.689170200620878,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.568272293612826,0,0,0,0,0.140669416410513,0.556543525114529,0,0,0.398495976502139,0.276283915531148,0.251932747854276,0.409074730008619,0.123084805461069,0,0.0898683511473268,0,0,0.789147245095469,0,0,0,0.371072392647405,0,0.260427761085233,0.524759999977174,0.724999575434793,0.227586896570999,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0.32681539055697,0.278847488557207,0.1539005170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| ||
|short_description=p3@ENST00000540557 | |||
}} | }} |
Latest revision as of 02:02, 1 August 2015
Short description: | p3@ENST00000540557 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000540557_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | 228bp_to_ENST00000540557_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 5.55e-17 | 4 |
astrocyte of the cerebellum | 2.15e-13 | 3 |
central nervous system pericyte | 6.29e-10 | 2 |
kidney tubule cell | 1.17e-09 | 10 |
nephron tubule epithelial cell | 1.17e-09 | 10 |
crystallin accumulating cell | 1.37e-09 | 4 |
vertebrate lens cell | 1.37e-09 | 4 |
lens epithelial cell | 1.37e-09 | 4 |
fibroblast of lymphatic vessel | 2.24e-09 | 2 |
mesangial cell | 8.61e-09 | 2 |
kidney interstitial cell | 8.61e-09 | 2 |
juxtaglomerular complex cell | 8.61e-09 | 2 |
renal interstitial pericyte | 8.61e-09 | 2 |
extraglomerular mesangial cell | 8.61e-09 | 2 |
trabecular meshwork cell | 1.76e-08 | 2 |
nucleus pulposus cell of intervertebral disc | 8.03e-07 | 3 |