FFCP PHASE1:Hg19::chr5:20616500..20616516,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000512688_5end | |association_with_transcript=0bp_to_ENST00000512688_5end | ||
|cluster_id=chr5:20616500..20616516,+ | |||
|description=CAGE_peak_1_at_ENST00000512688_5end | |description=CAGE_peak_1_at_ENST00000512688_5end | ||
|id=chr5:20616500..20616516,+ | |id=chr5:20616500..20616516,+ | ||
|ontology_enrichment_celltype=CL:0000039!3.30e-12!7;CL:0000586!3.30e-12!7;CL:0002149!6.21e-10!6;CL:0002255!6.21e-10!6;CL:1000415!1.39e-08!2;CL:0000054!2.34e-08!2;CL:0000137!2.34e-08!2;CL:0000092!2.34e-08!2 | |ontology_enrichment_celltype=CL:0000039!3.30e-12!7;CL:0000586!3.30e-12!7;CL:0002149!6.21e-10!6;CL:0002255!6.21e-10!6;CL:1000415!1.39e-08!2;CL:0000054!2.34e-08!2;CL:0000137!2.34e-08!2;CL:0000092!2.34e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;5.52e-11;2!CL:0000054;1.05e-10;2!CL:0000137;1.05e-10;2!CL:0000092;1.05e-10;2!CL:0002178;1.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,6.11e-11,2;CL:0000054,1.22e-10,2;CL:0000137,1.22e-10,2;CL:0000092,1.22e-10,2;CL:0002178,1.30e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.08e-12;10!UBERON:0005564;7.08e-12;10 | |||
|ontology_enrichment_disease=DOID:162!4.65e-19!235;DOID:14566!1.86e-18!239;DOID:0050687!3.55e-13!143;DOID:299!1.00e-10!25;DOID:0050686!1.94e-10!137;DOID:305!2.43e-10!106;DOID:3001!6.21e-10!6;DOID:200!2.34e-08!2;DOID:4305!2.34e-08!2;DOID:1036!1.46e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:299;8.57e-12;25!DOID:200;1.05e-10;2!DOID:4305;1.05e-10;2!DOID:1036;6.85e-10;8!DOID:201;6.43e-08;6!DOID:0060100;6.43e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.46e-18,235;DOID:14566,5.00e-18,239;DOID:305,1.29e-12,106;DOID:299,8.57e-12,25;DOID:0050687,8.58e-12,143;DOID:0050686,6.24e-11,137;DOID:200,1.22e-10,2;DOID:4305,1.22e-10,2;DOID:1036,6.93e-10,8;DOID:201,6.91e-08,6;DOID:0060100,6.91e-08,6;DOID:7,5.84e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.88e-11!8;UBERON:0003133!2.75e-08!48;UBERON:0003135!5.15e-08!11;UBERON:0005156!1.97e-07!59;UBERON:0000990!1.97e-07!59 | |ontology_enrichment_uberon=UBERON:0000473!3.88e-11!8;UBERON:0003133!2.75e-08!48;UBERON:0003135!5.15e-08!11;UBERON:0005156!1.97e-07!59;UBERON:0000990!1.97e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.85e-10;8!UBERON:0002110;1.35e-07;3!UBERON:0003135;3.25e-07;11!UBERON:0002294;6.33e-07;7!UBERON:0001173;6.33e-07;7!UBERON:0002371;8.59e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.27e-10,8;UBERON:0002110,1.44e-07,3;UBERON:0006242,1.44e-07,3;UBERON:0003135,3.39e-07,11 | |||
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| ||
|short_description=p1@ENST00000512688 | |short_description=p1@ENST00000512688 | ||
}} | }} |
Latest revision as of 14:10, 30 July 2015
Short description: | p1@ENST00000512688 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000512688_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000512688_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 6.11e-11 | 2 |
bone matrix secreting cell | 1.22e-10 | 2 |
osteocyte | 1.22e-10 | 2 |
osteoclast | 1.22e-10 | 2 |
epithelial cell of stomach | 1.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 7.27e-10 | 8 |
gallbladder | 1.44e-07 | 3 |
gall bladder primordium | 1.44e-07 | 3 |
male reproductive organ | 3.39e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.46e-18 | 235 |
disease of cellular proliferation | 5.00e-18 | 239 |
carcinoma | 1.29e-12 | 106 |
adenocarcinoma | 8.57e-12 | 25 |
cell type cancer | 8.58e-12 | 143 |
organ system cancer | 6.24e-11 | 137 |
giant cell tumor | 1.22e-10 | 2 |
bone giant cell tumor | 1.22e-10 | 2 |
chronic leukemia | 6.93e-10 | 8 |
connective tissue cancer | 6.91e-08 | 6 |
musculoskeletal system cancer | 6.91e-08 | 6 |
disease of anatomical entity | 5.84e-07 | 39 |