FFCP PHASE1:Hg19::chr3:98700102..98700111,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=200bp_to_ENST00000473756_5end | |||
|cluster_id=chr3:98700102..98700111,+ | |||
|coexpression_cluster_id=C1081 | |||
|description=CAGE_peak_8_at_ENST00000473756_5end | |||
|id=chr3:98700102..98700111,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.12e-08!679;CL:0000004!1.12e-08!679;CL:0000255!1.12e-08!679;CL:0000012!1.61e-08!682;CL:1000507!1.27e-07!12;CL:1000494!1.27e-07!12;CL:0000066!1.48e-07!254;CL:1000449!5.57e-07!16;CL:0002166!8.23e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.91e-24;10!CL:1000494;1.91e-24;10!CL:1000449;3.79e-16;15!CL:0000650;1.46e-14;2!CL:1000500;1.46e-14;2!CL:1000618;1.46e-14;2!CL:1001318;1.46e-14;2!CL:0002173;1.46e-14;2!CL:1000497;3.43e-14;17!CL:0002518;3.43e-14;17!CL:0002681;2.15e-09;12!CL:0002584;2.15e-09;12!CL:0002379;1.81e-08;1!CL:0002601;3.96e-08;1!CL:0000669;1.01e-07;4!CL:0000097;9.46e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.45e-24,10;CL:1000494,2.45e-24,10;CL:1000449,4.46e-16,15;CL:0000650,3.84e-14,2;CL:1000500,3.84e-14,2;CL:1000618,3.84e-14,2;CL:1001318,3.84e-14,2;CL:0002173,3.84e-14,2;CL:1000497,3.96e-14,17;CL:0002518,3.96e-14,17;CL:0000066,3.87e-10,253;CL:0002681,2.51e-09,12;CL:0002584,2.51e-09,12;CL:0002379,1.63e-08,1;CL:0002601,4.41e-08,1;CL:0000669,1.63e-07,4;CL:0000097,9.60e-07,5;CL:0002028,9.60e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!1.09e-09!27;DOID:193!8.77e-09!29;DOID:2394!7.48e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3620;1.81e-08;1!DOID:3565;1.81e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.63e-08,1;DOID:3565,1.63e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!4.29e-10!11;UBERON:0005256!1.20e-08!143;UBERON:0000058!2.23e-08!26;UBERON:0000488!4.32e-08!4;UBERON:0009773!1.27e-07!12;UBERON:0001231!1.27e-07!12;UBERON:0004810!1.27e-07!12;UBERON:0004211!5.57e-07!16;UBERON:0001285!5.57e-07!16;UBERON:0007684!5.57e-07!16;UBERON:0003220!5.57e-07!16;UBERON:0004208!5.57e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.91e-24;10!UBERON:0009773;1.91e-24;10!UBERON:0001231;1.91e-24;10!UBERON:0004810;1.91e-24;10!UBERON:0006555;3.79e-16;15!UBERON:0004819;3.79e-16;15!UBERON:0001285;3.79e-16;15!UBERON:0007684;3.79e-16;15!UBERON:0003567;1.46e-14;2!UBERON:0003838;1.46e-14;2!UBERON:0003586;1.46e-14;2!UBERON:0005169;1.46e-14;2!UBERON:0002321;1.46e-14;2!UBERON:0005215;1.46e-14;2!UBERON:0002303;1.46e-14;2!UBERON:0002319;1.46e-14;2!UBERON:0002113;6.64e-10;24!UBERON:0011143;6.64e-10;24!UBERON:0002294;1.14e-09;7!UBERON:0001173;1.14e-09;7!UBERON:0001225;2.15e-09;12!UBERON:0008987;2.15e-09;12!UBERON:0004913;1.05e-08;1!UBERON:0003703;1.05e-08;1!UBERON:0001174;1.05e-08;1!UBERON:0004914;1.05e-08;1!UBERON:0000489;4.18e-08;29!UBERON:0002394;5.34e-08;4!UBERON:0003928;5.34e-08;4!UBERON:0006554;8.11e-08;30!UBERON:0001008;8.11e-08;30!UBERON:0003891;1.01e-07;4!UBERON:0001851;1.54e-07;15!UBERON:0000353;1.54e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.45e-24,10;UBERON:0004211,4.46e-16,15;UBERON:0009773,4.46e-16,15;UBERON:0001231,4.46e-16,15;UBERON:0001285,4.46e-16,15;UBERON:0007684,4.46e-16,15;UBERON:0004208,4.46e-16,15;UBERON:0006555,4.83e-15,16;UBERON:0004819,4.83e-15,16;UBERON:0003567,3.84e-14,2;UBERON:0003838,3.84e-14,2;UBERON:0003586,3.84e-14,2;UBERON:0005169,3.84e-14,2;UBERON:0002321,3.84e-14,2;UBERON:0005215,3.84e-14,2;UBERON:0002303,3.84e-14,2;UBERON:0002319,3.84e-14,2;UBERON:0001225,2.51e-09,12;UBERON:0008987,2.51e-09,12;UBERON:0002113,4.61e-09,26;UBERON:0003918,4.61e-09,26;UBERON:0011143,4.61e-09,26;UBERON:0005095,4.61e-09,26;UBERON:0007687,4.61e-09,26;UBERON:0004913,1.05e-08,1;UBERON:0003703,1.05e-08,1;UBERON:0001174,1.05e-08,1;UBERON:0004914,1.05e-08,1;UBERON:0002294,1.14e-07,9;UBERON:0001173,1.14e-07,9;UBERON:0004912,1.14e-07,9;UBERON:0000489,1.62e-07,31;UBERON:0003891,1.63e-07,4;UBERON:0001851,1.75e-07,15;UBERON:0000353,1.75e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,1.33037638477538,0.790513071238134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72131935057184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.439001141634502,0,0,0,0,0,4.3299402607582,0.34779121492523,0.469634776943287,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,3.02367830757947,0.567100388969546,0.0895585227028483,0,0.383382679165211,13.7945706610864,3.52193736052904,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0.65147236858747,0,0,0,1.74306691720059,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492762936082855,0.519254429183621,0.232420756919918,0,0,0,0,0.182091168006717,0.131124414959424,0,3.85076685522074,1.56869953835371,0,3.79985864014353,0,0,0.863663664408557,0,1.08378575017541,1.00337954770971,1.78413391131527,0,0.447749509444357,0,0,0.769350375349168,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0.94443704049192,0,0,0,0.869932992075073,0.37064843820784,0,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0.608731130888112,0.30982349809975,0,0,0,0.35667105148125,1.41904425628239,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0.284136146806413,0,0,0,0,0,1.66963057534359,0,0,0,0,0,0,0,0,1.88723537409386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.47698645169619,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.685209623233754,0.19871461170299,0,0,2.00397050628834,0,0,0,0,0,1.29649318189335,1.98804056904692,0,0.407712618220842,0.836822770498666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05600336519407,0,0,0,0,0,0,1.72844298240254,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,2.58792401667989,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0.228840068396924,0,0.310874401165561,0.147855149989634,0,0.449803112163605,0,0,0.53168342911599,2.08698024724694,0.150257608997218,0,0.406870733204662,0.363697318405119,0.107410557042488,0,0.398095888698616,0,0,0,0,0.385239660814607,0,0,0,0.694567422971502,0,0,0,0,0,0,0.506827321959218,1.02496607435179,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,6.80137996598408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0.62041277132864,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47026410200984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@ENST00000473756 | |||
}} |
Latest revision as of 00:10, 30 July 2015
Short description: | p8@ENST00000473756 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ENST00000473756_5end |
Coexpression cluster: | C1081_papillotubular_Renal_Mast_giant_meningioma_mucinous_gall |
Association with transcript: | 200bp_to_ENST00000473756_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.45e-24 | 10 |
nephron tubule epithelial cell | 2.45e-24 | 10 |
epithelial cell of nephron | 4.46e-16 | 15 |
mesangial cell | 3.84e-14 | 2 |
kidney interstitial cell | 3.84e-14 | 2 |
juxtaglomerular complex cell | 3.84e-14 | 2 |
renal interstitial pericyte | 3.84e-14 | 2 |
extraglomerular mesangial cell | 3.84e-14 | 2 |
kidney cell | 3.96e-14 | 17 |
kidney epithelial cell | 3.96e-14 | 17 |
epithelial cell | 3.87e-10 | 253 |
kidney cortical cell | 2.51e-09 | 12 |
renal cortical epithelial cell | 2.51e-09 | 12 |
meningothelial cell | 1.63e-08 | 1 |
uterine smooth muscle cell | 4.41e-08 | 1 |
pericyte cell | 1.63e-07 | 4 |
mast cell | 9.60e-07 | 5 |
basophil mast progenitor cell | 9.60e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.45e-24 | 10 |
nephron epithelium | 4.46e-16 | 15 |
renal tubule | 4.46e-16 | 15 |
nephron tubule | 4.46e-16 | 15 |
nephron | 4.46e-16 | 15 |
uriniferous tubule | 4.46e-16 | 15 |
nephrogenic mesenchyme | 4.46e-16 | 15 |
excretory tube | 4.83e-15 | 16 |
kidney epithelium | 4.83e-15 | 16 |
abdomen connective tissue | 3.84e-14 | 2 |
abdominal segment connective tissue | 3.84e-14 | 2 |
trunk connective tissue | 3.84e-14 | 2 |
interstitial tissue | 3.84e-14 | 2 |
extraglomerular mesangium | 3.84e-14 | 2 |
kidney interstitium | 3.84e-14 | 2 |
juxtaglomerular apparatus | 3.84e-14 | 2 |
mesangium | 3.84e-14 | 2 |
cortex of kidney | 2.51e-09 | 12 |
renal parenchyma | 2.51e-09 | 12 |
kidney | 4.61e-09 | 26 |
kidney mesenchyme | 4.61e-09 | 26 |
upper urinary tract | 4.61e-09 | 26 |
kidney rudiment | 4.61e-09 | 26 |
kidney field | 4.61e-09 | 26 |
hepatopancreatic ampulla | 1.05e-08 | 1 |
extrahepatic bile duct | 1.05e-08 | 1 |
common bile duct | 1.05e-08 | 1 |
duodenal papilla | 1.05e-08 | 1 |
biliary system | 1.14e-07 | 9 |
biliary tree | 1.14e-07 | 9 |
biliary bud | 1.14e-07 | 9 |
cavitated compound organ | 1.62e-07 | 31 |
stroma | 1.63e-07 | 4 |
cortex | 1.75e-07 | 15 |
parenchyma | 1.75e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.63e-08 | 1 |
meningioma | 1.63e-08 | 1 |