FFCP PHASE1:Hg19::chr3:98275000..98275016,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:98275000..98275016,- | |||
|coexpression_cluster_id=C414 | |||
|description=CAGE_peak_at_chr3:98275000..98275016,- | |||
|id=chr3:98275000..98275016,- | |||
|ontology_enrichment_celltype=CL:0000945!3.57e-09!24;CL:0000826!3.57e-09!24;CL:0000080!6.59e-08!6;CL:0000838!1.01e-07!52;CL:0000542!1.53e-07!53;CL:0000051!1.53e-07!53;CL:0000988!3.58e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.81e-40;1!CL:0000911;1.81e-40;1!CL:0000814;1.81e-40;1!CL:1000415;5.15e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.30e-40,1;CL:0000914,3.30e-40,1;CL:0000911,3.30e-40,1;CL:0000814,3.30e-40,1;CL:0002042,3.30e-40,1;CL:0002039,3.30e-40,1;CL:0002040,3.30e-40,1;CL:0002041,3.30e-40,1;CL:1000415,5.70e-21,2;CL:0000893,6.96e-21,2;CL:0002489,6.96e-21,2;CL:0000809,6.96e-21,2;CL:0000808,6.96e-21,2;CL:0000894,6.96e-21,2;CL:0000806,6.96e-21,2;CL:0000807,6.96e-21,2;CL:0000805,6.96e-21,2;CL:0002425,6.96e-21,2 | |||
|ontology_enrichment_development_v019=CL:0002425;5.15e-21;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.15e-08!10;DOID:2531!5.90e-08!51;DOID:0060083!5.90e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001282!9.91e-07!1;UBERON:0009842!9.91e-07!1;UBERON:0003704!9.91e-07!1;UBERON:0001171!9.91e-07!1;UBERON:0001172!9.91e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;6.62e-41;1!UBERON:0009842;6.62e-41;1!UBERON:0003704;6.62e-41;1!UBERON:0001171;6.62e-41;1!UBERON:0001172;6.62e-41;1!UBERON:0002294;1.21e-23;7!UBERON:0001173;1.21e-23;7!UBERON:0001280;1.22e-14;3!UBERON:0004647;1.22e-14;3!UBERON:0002110;1.71e-14;3!UBERON:0002394;2.53e-11;4!UBERON:0003928;2.53e-11;4!UBERON:0002423;2.24e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,6.62e-41,1;UBERON:0009842,6.62e-41,1;UBERON:0003704,6.62e-41,1;UBERON:0001171,6.62e-41,1;UBERON:0001172,6.62e-41,1;UBERON:0002294,1.24e-18,9;UBERON:0001173,1.24e-18,9;UBERON:0004912,1.24e-18,9;UBERON:0001280,1.22e-14,3;UBERON:0004647,1.22e-14,3;UBERON:0005171,1.22e-14,3;UBERON:0002110,1.83e-14,3;UBERON:0006242,1.83e-14,3;UBERON:0002370,3.79e-11,4;UBERON:0005058,3.79e-11,4;UBERON:0009113,3.79e-11,4;UBERON:0003295,3.79e-11,4;UBERON:0005562,3.79e-11,4;UBERON:0002394,5.54e-08,6;UBERON:0003928,5.54e-08,6;UBERON:0003351,7.25e-08,6;UBERON:0003929,2.17e-07,54;UBERON:0009497,2.28e-07,25;UBERON:0000015,2.28e-07,25;UBERON:0002423,2.28e-07,25;UBERON:0006235,2.28e-07,25;UBERON:0004161,2.28e-07,25;UBERON:0004177,6.39e-07,7;UBERON:0005057,6.39e-07,7 | |||
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|short_description=p@chr3:98275000..98275016,- | |||
}} | }} |
Latest revision as of 00:02, 30 July 2015
Short description: | p@chr3:98275000..98275016, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:98275000..98275016, - |
Coexpression cluster: | C414_cholangiocellular_testis_gall_pagetoid_mesothelioma_thyroid_osteoclastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.30e-40 | 1 |
immature NK T cell | 3.30e-40 | 1 |
effector T cell | 3.30e-40 | 1 |
mature NK T cell | 3.30e-40 | 1 |
immature NK T cell stage IV | 3.30e-40 | 1 |
immature NK T cell stage I | 3.30e-40 | 1 |
immature NK T cell stage II | 3.30e-40 | 1 |
immature NK T cell stage III | 3.30e-40 | 1 |
epithelial cell of gall bladder | 5.70e-21 | 2 |
thymocyte | 6.96e-21 | 2 |
double negative thymocyte | 6.96e-21 | 2 |
double-positive, alpha-beta thymocyte | 6.96e-21 | 2 |
DN4 thymocyte | 6.96e-21 | 2 |
DN1 thymic pro-T cell | 6.96e-21 | 2 |
DN2 thymocyte | 6.96e-21 | 2 |
DN3 thymocyte | 6.96e-21 | 2 |
immature single positive thymocyte | 6.96e-21 | 2 |
early T lineage precursor | 6.96e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 6.62e-41 | 1 |
acinus | 6.62e-41 | 1 |
intrahepatic bile duct | 6.62e-41 | 1 |
portal lobule | 6.62e-41 | 1 |
hepatic acinus | 6.62e-41 | 1 |
biliary system | 1.24e-18 | 9 |
biliary tree | 1.24e-18 | 9 |
biliary bud | 1.24e-18 | 9 |
liver parenchyma | 1.22e-14 | 3 |
liver lobule | 1.22e-14 | 3 |
hepatic duct | 1.22e-14 | 3 |
gallbladder | 1.83e-14 | 3 |
gall bladder primordium | 1.83e-14 | 3 |
thymus | 3.79e-11 | 4 |
hemolymphoid system gland | 3.79e-11 | 4 |
thymic region | 3.79e-11 | 4 |
pharyngeal gland | 3.79e-11 | 4 |
thymus primordium | 3.79e-11 | 4 |
bile duct | 5.54e-08 | 6 |
digestive system duct | 5.54e-08 | 6 |
pharyngeal epithelium | 7.25e-08 | 6 |
gut epithelium | 2.17e-07 | 54 |
epithelium of foregut-midgut junction | 2.28e-07 | 25 |
anatomical boundary | 2.28e-07 | 25 |
hepatobiliary system | 2.28e-07 | 25 |
foregut-midgut junction | 2.28e-07 | 25 |
septum transversum | 2.28e-07 | 25 |
hemopoietic organ | 6.39e-07 | 7 |
immune organ | 6.39e-07 | 7 |