FFCP PHASE1:Hg19::chr3:34517538..34517551,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:34517538..34517551,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr3:34517538..34517551,+ | |||
|id=chr3:34517538..34517551,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.40e-66!4;UBERON:0005058!2.40e-66!4;UBERON:0009113!2.40e-66!4;UBERON:0003295!2.40e-66!4;UBERON:0005562!2.40e-66!4;UBERON:0003351!9.76e-45!6;UBERON:0004177!1.49e-38!7;UBERON:0000974!2.08e-27!10;UBERON:0003408!2.08e-27!10;UBERON:0001042!2.08e-27!10;UBERON:0009145!2.08e-27!10;UBERON:0006562!4.86e-25!11;UBERON:0009722!4.86e-25!11;UBERON:0007690!4.86e-25!11;UBERON:0008814!1.04e-18!15;UBERON:0001557!4.91e-15!19;UBERON:0005057!2.63e-11!26;UBERON:0004807!1.40e-10!28;UBERON:0002368!1.09e-08!35;UBERON:0000949!5.42e-07!45;UBERON:0000072!7.30e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.29e-195;2!UBERON:0005058;3.29e-195;2!UBERON:0009113;3.29e-195;2!UBERON:0004177;3.49e-79;5!UBERON:0005057;3.49e-79;5!UBERON:0000077;6.71e-16;27!UBERON:0002405;6.71e-16;27!UBERON:0002390;1.64e-10;32!UBERON:0002368;1.64e-10;33!UBERON:0000949;1.53e-08;43!UBERON:0002530;3.40e-07;57!UBERON:0002193;3.43e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.55e-98,4;UBERON:0005058,1.55e-98,4;UBERON:0009113,1.55e-98,4;UBERON:0003295,1.55e-98,4;UBERON:0005562,1.55e-98,4;UBERON:0003351,2.83e-66,6;UBERON:0004177,4.76e-57,7;UBERON:0005057,4.76e-57,7;UBERON:0000974,2.00e-40,10;UBERON:0003408,2.00e-40,10;UBERON:0001042,2.00e-40,10;UBERON:0009145,2.00e-40,10;UBERON:0006562,6.80e-37,11;UBERON:0009722,6.80e-37,11;UBERON:0007690,6.80e-37,11;UBERON:0008814,3.88e-23,18;UBERON:0001557,5.37e-22,19;UBERON:0004807,2.22e-15,28;UBERON:0000077,6.74e-15,29;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0000072,1.08e-09,47;UBERON:0003929,1.34e-08,54;UBERON:0000065,1.34e-08,54;UBERON:0002530,5.66e-08,59;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62 | |||
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|short_description=p@chr3:34517538..34517551,+ | |||
}} | }} | ||
Latest revision as of 20:34, 29 July 2015
| Short description: | p@chr3:34517538..34517551, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr3:34517538..34517551, + |
| Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| thymus | 1.55e-98 | 4 |
| hemolymphoid system gland | 1.55e-98 | 4 |
| thymic region | 1.55e-98 | 4 |
| pharyngeal gland | 1.55e-98 | 4 |
| thymus primordium | 1.55e-98 | 4 |
| pharyngeal epithelium | 2.83e-66 | 6 |
| hemopoietic organ | 4.76e-57 | 7 |
| immune organ | 4.76e-57 | 7 |
| neck | 2.00e-40 | 10 |
| gland of gut | 2.00e-40 | 10 |
| chordate pharynx | 2.00e-40 | 10 |
| pharyngeal region of foregut | 2.00e-40 | 10 |
| pharynx | 6.80e-37 | 11 |
| entire pharyngeal arch endoderm | 6.80e-37 | 11 |
| early pharyngeal endoderm | 6.80e-37 | 11 |
| pharyngeal arch system | 3.88e-23 | 18 |
| upper respiratory tract | 5.37e-22 | 19 |
| respiratory system epithelium | 2.22e-15 | 28 |
| mixed endoderm/mesoderm-derived structure | 6.74e-15 | 29 |
| endocrine gland | 1.42e-12 | 35 |
| endocrine system | 4.55e-10 | 45 |
| segment of respiratory tract | 1.08e-09 | 47 |
| gut epithelium | 1.34e-08 | 54 |
| respiratory tract | 1.34e-08 | 54 |
| gland | 5.66e-08 | 59 |
| anterior region of body | 1.20e-07 | 62 |
| craniocervical region | 1.20e-07 | 62 |