FFCP PHASE1:Hg19::chr3:158384350..158384362,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:158384350..158384362,- | |||
|description=CAGE_peak_at_chr3:158384350..158384362,- | |description=CAGE_peak_at_chr3:158384350..158384362,- | ||
|id=chr3:158384350..158384362,- | |id=chr3:158384350..158384362,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002602;3.81e-21;2!CL:0002564;1.22e-14;3!CL:0002144;1.83e-14;3!CL:0002622;1.83e-14;3!CL:0002537;3.22e-09;5 | |ontology_enrichment_celltype_v019=CL:0002602;3.81e-21;2!CL:0002564;1.22e-14;3!CL:0002144;1.83e-14;3!CL:0002622;1.83e-14;3!CL:0002537;3.22e-09;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002602,3.81e-21,2;CL:0002564,1.22e-14,3;CL:0002622,1.60e-14,3;CL:0002144,1.83e-14,3;CL:0002537,3.49e-09,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.05e-32;5!UBERON:0002216;1.05e-32;5!UBERON:0011134;1.05e-32;5!UBERON:0002209;1.05e-32;5!UBERON:0002213;1.05e-32;5!UBERON:0007844;1.05e-32;5!UBERON:0011138;1.05e-32;5!UBERON:0001130;1.05e-32;5!UBERON:0001066;1.05e-32;5!UBERON:0001468;1.05e-32;5!UBERON:0006444;3.81e-21;2!UBERON:0001995;3.81e-21;2!UBERON:0004715;3.81e-21;2!UBERON:0004905;6.64e-21;8!UBERON:0000982;6.64e-21;8!UBERON:0004770;6.64e-21;8!UBERON:0002242;1.22e-14;3!UBERON:0002418;1.40e-14;3!UBERON:0004755;1.40e-14;3!UBERON:0010523;1.83e-14;3!UBERON:0001915;1.83e-14;3!UBERON:0001982;1.83e-14;3!UBERON:0000075;5.28e-11;16!UBERON:0004765;3.78e-07;26!UBERON:0000305;6.04e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0011135;1.05e-32;5!UBERON:0002216;1.05e-32;5!UBERON:0011134;1.05e-32;5!UBERON:0002209;1.05e-32;5!UBERON:0002213;1.05e-32;5!UBERON:0007844;1.05e-32;5!UBERON:0011138;1.05e-32;5!UBERON:0001130;1.05e-32;5!UBERON:0001066;1.05e-32;5!UBERON:0001468;1.05e-32;5!UBERON:0006444;3.81e-21;2!UBERON:0001995;3.81e-21;2!UBERON:0004715;3.81e-21;2!UBERON:0004905;6.64e-21;8!UBERON:0000982;6.64e-21;8!UBERON:0004770;6.64e-21;8!UBERON:0002242;1.22e-14;3!UBERON:0002418;1.40e-14;3!UBERON:0004755;1.40e-14;3!UBERON:0010523;1.83e-14;3!UBERON:0001915;1.83e-14;3!UBERON:0001982;1.83e-14;3!UBERON:0000075;5.28e-11;16!UBERON:0004765;3.78e-07;26!UBERON:0000305;6.04e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.05e-32,5;UBERON:0002216,1.05e-32,5;UBERON:0011134,1.05e-32,5;UBERON:0002209,1.05e-32,5;UBERON:0002213,1.05e-32,5;UBERON:0005856,1.05e-32,5;UBERON:0005866,1.05e-32,5;UBERON:0005863,1.05e-32,5;UBERON:0007844,1.05e-32,5;UBERON:0011138,1.05e-32,5;UBERON:0001130,1.05e-32,5;UBERON:0001066,1.05e-32,5;UBERON:0001468,1.05e-32,5;UBERON:0006444,3.81e-21,2;UBERON:0001995,3.81e-21,2;UBERON:0004715,3.81e-21,2;UBERON:0004905,6.64e-21,8;UBERON:0000982,6.64e-21,8;UBERON:0004770,6.64e-21,8;UBERON:0002242,1.22e-14,3;UBERON:0003068,1.22e-14,3;UBERON:0002328,1.22e-14,3;UBERON:0004880,1.22e-14,3;UBERON:0002418,1.40e-14,3;UBERON:0004755,1.40e-14,3;UBERON:0010523,1.83e-14,3;UBERON:0001915,1.83e-14,3;UBERON:0001982,1.83e-14,3;UBERON:0000075,5.28e-11,16;UBERON:0000305,6.39e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,2.10402800032079,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0.567208902984407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,1.20848795132744,0,0,0,0,0.625098097988558,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.473227200159376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0.433099343283221,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.531876233169741,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.23879801142925,0,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0,0.695068915744663,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0,0,1.7222167224691,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.859361958946189,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0.9554993798559,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667388411352415,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,2.10402800032079,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0.567208902984407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,1.20848795132744,0,0,0,0,0.625098097988558,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.473227200159376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0.433099343283221,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.531876233169741,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.23879801142925,0,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0,0.695068915744663,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0,0,1.7222167224691,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.859361958946189,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0.9554993798559,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667388411352415,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:158384350..158384362,- | |short_description=p@chr3:158384350..158384362,- | ||
}} | }} |
Latest revision as of 17:38, 29 July 2015
Short description: | p@chr3:158384350..158384362, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:158384350..158384362, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 3.81e-21 | 2 |
nucleus pulposus cell of intervertebral disc | 1.22e-14 | 3 |
prostate stromal cell | 1.60e-14 | 3 |
capillary endothelial cell | 1.83e-14 | 3 |
amnion mesenchymal stem cell | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 1.05e-32 | 5 |
symphysis | 1.05e-32 | 5 |
nonsynovial joint | 1.05e-32 | 5 |
fibrous joint | 1.05e-32 | 5 |
cartilaginous joint | 1.05e-32 | 5 |
developing mesenchymal condensation | 1.05e-32 | 5 |
pre-cartilage condensation | 1.05e-32 | 5 |
cartilaginous condensation | 1.05e-32 | 5 |
cartilage element | 1.05e-32 | 5 |
post-cranial axial skeletal system | 1.05e-32 | 5 |
vertebral column | 1.05e-32 | 5 |
intervertebral disk | 1.05e-32 | 5 |
intervertebral joint | 1.05e-32 | 5 |
annulus fibrosus | 3.81e-21 | 2 |
fibrocartilage | 3.81e-21 | 2 |
annulus fibrosus disci intervertebralis | 3.81e-21 | 2 |
articulation | 6.64e-21 | 8 |
skeletal joint | 6.64e-21 | 8 |
articular system | 6.64e-21 | 8 |
nucleus pulposus | 1.22e-14 | 3 |
axial mesoderm | 1.22e-14 | 3 |
notochord | 1.22e-14 | 3 |
chordamesoderm | 1.22e-14 | 3 |
cartilage tissue | 1.40e-14 | 3 |
skeletal tissue | 1.40e-14 | 3 |
microcirculatory vessel | 1.83e-14 | 3 |
endothelium of capillary | 1.83e-14 | 3 |
capillary | 1.83e-14 | 3 |
subdivision of skeletal system | 5.28e-11 | 16 |
amnion | 6.39e-07 | 7 |