FFCP PHASE1:Hg19::chr2:45166354..45166379,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000437916_5end | |association_with_transcript=-16bp_to_ENST00000437916_5end | ||
|cluster_id=chr2:45166354..45166379,- | |||
|coexpression_cluster_id=C573 | |coexpression_cluster_id=C573 | ||
|description=CAGE_peak_1_at_ENST00000437916_5end | |description=CAGE_peak_1_at_ENST00000437916_5end | ||
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|ontology_enrichment_celltype=CL:0002322!3.57e-09!5;CL:0000066!1.51e-08!254;CL:0002586!1.95e-07!3;CL:0000064!2.07e-07!3;CL:0005012!2.07e-07!3;CL:0000067!2.07e-07!3;CL:0002304!2.07e-07!3 | |ontology_enrichment_celltype=CL:0002322!3.57e-09!5;CL:0000066!1.51e-08!254;CL:0002586!1.95e-07!3;CL:0000064!2.07e-07!3;CL:0005012!2.07e-07!3;CL:0000067!2.07e-07!3;CL:0002304!2.07e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.35e-15;3!CL:0000064;1.59e-15;3!CL:0000067;1.59e-15;3!CL:0005012;1.59e-15;3!CL:0002304;1.59e-15;3!CL:0000149;8.19e-12;4!CL:0000147;1.53e-11;14!CL:0000306;4.26e-11;4!CL:0002222;4.26e-11;4!CL:0002224;4.26e-11;4!CL:1000415;6.11e-10;2!CL:0000075;7.37e-10;27 | |ontology_enrichment_celltype_v019=CL:0002586;1.35e-15;3!CL:0000064;1.59e-15;3!CL:0000067;1.59e-15;3!CL:0005012;1.59e-15;3!CL:0002304;1.59e-15;3!CL:0000149;8.19e-12;4!CL:0000147;1.53e-11;14!CL:0000306;4.26e-11;4!CL:0002222;4.26e-11;4!CL:0002224;4.26e-11;4!CL:1000415;6.11e-10;2!CL:0000075;7.37e-10;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.38e-15,3;CL:0000064,1.59e-15,3;CL:0000067,1.59e-15,3;CL:0005012,1.59e-15,3;CL:0002304,1.59e-15,3;CL:0000149,8.35e-12,4;CL:0000147,1.64e-11,14;CL:0000306,3.78e-11,4;CL:0002222,3.78e-11,4;CL:0002224,3.78e-11,4;CL:1000415,5.84e-10,2;CL:0000075,7.14e-10,27 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.85e-10;2!UBERON:0003056;3.54e-07;3 | |ontology_enrichment_development_v019=UBERON:0010122;3.85e-10;2!UBERON:0003056;3.54e-07;3 | ||
|ontology_enrichment_disease=DOID:305!2.66e-14!106;DOID:0050687!3.62e-13!143;DOID:1324!5.21e-07!15;DOID:162!6.59e-07!235 | |ontology_enrichment_disease=DOID:305!2.66e-14!106;DOID:0050687!3.62e-13!143;DOID:1324!5.21e-07!15;DOID:162!6.59e-07!235 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!5.19e-24!61;UBERON:0007625!3.27e-18!11;UBERON:0003075!7.67e-18!86;UBERON:0007284!7.67e-18!86;UBERON:0002346!1.15e-17!90;UBERON:0000970!2.43e-15!20;UBERON:0002104!2.00e-14!21;UBERON:0000019!9.35e-14!19;UBERON:0000047!9.35e-14!19;UBERON:0004088!9.35e-14!19;UBERON:0003072!9.35e-14!19;UBERON:0003071!9.35e-14!19;UBERON:0004128!9.35e-14!19;UBERON:0002780!6.42e-13!41;UBERON:0001890!6.42e-13!41;UBERON:0006240!6.42e-13!41;UBERON:0000020!7.76e-13!23;UBERON:0003080!1.74e-12!42;UBERON:0001032!3.82e-12!24;UBERON:0004456!3.82e-12!24;UBERON:0001456!4.06e-12!21;UBERON:0005743!6.88e-12!86;UBERON:0000966!5.38e-11!5;UBERON:0005388!5.38e-11!5;UBERON:0001802!5.38e-11!5;UBERON:0000073!8.70e-11!94;UBERON:0001016!8.70e-11!94;UBERON:0002791!1.44e-10!33;UBERON:0002114!2.24e-10!12;UBERON:0001893!3.85e-10!34;UBERON:0000033!4.66e-10!123;UBERON:0002420!1.25e-09!9;UBERON:0007245!1.25e-09!9;UBERON:0010009!1.25e-09!9;UBERON:0010011!1.25e-09!9;UBERON:0000454!1.25e-09!9;UBERON:0009663!2.13e-09!7;UBERON:0000153!3.66e-09!129;UBERON:0007811!3.66e-09!129;UBERON:0000488!3.66e-09!4;UBERON:0002020!6.62e-09!34;UBERON:0003528!6.62e-09!34;UBERON:0002075!6.89e-09!18;UBERON:0001264!9.84e-09!10;UBERON:0003922!9.84e-09!10;UBERON:0003923!9.84e-09!10;UBERON:0003924!9.84e-09!10;UBERON:0003921!9.84e-09!10;UBERON:0002108!1.01e-08!14;UBERON:0000955!1.16e-08!69;UBERON:0006238!1.16e-08!69;UBERON:0001017!1.36e-08!82;UBERON:0000369!1.76e-08!4;UBERON:0002435!1.76e-08!4;UBERON:0000204!1.76e-08!4;UBERON:0010082!1.76e-08!4;UBERON:0001869!1.81e-08!32;UBERON:0002616!2.39e-08!59;UBERON:0001737!5.87e-08!9;UBERON:0005085!7.14e-08!29;UBERON:0001049!7.29e-08!57;UBERON:0005068!7.29e-08!57;UBERON:0006241!7.29e-08!57;UBERON:0007135!7.29e-08!57;UBERON:0001045!8.05e-08!11;UBERON:0001048!1.39e-07!168;UBERON:0000924!1.77e-07!173;UBERON:0006601!1.77e-07!173;UBERON:0001781!1.95e-07!3;UBERON:0001782!1.95e-07!3;UBERON:0005424!1.95e-07!3;UBERON:0001778!2.07e-07!3;UBERON:0001775!2.07e-07!3;UBERON:0004121!2.28e-07!169;UBERON:0000481!3.08e-07!347;UBERON:0002308!4.16e-07!9;UBERON:0000125!4.16e-07!9;UBERON:0000063!5.03e-07!97;UBERON:0008947!6.63e-07!38;UBERON:0003258!6.63e-07!38;UBERON:0000064!6.70e-07!219;UBERON:0005383!6.92e-07!3;UBERON:0005382!6.92e-07!3 | |ontology_enrichment_uberon=UBERON:0003056!5.19e-24!61;UBERON:0007625!3.27e-18!11;UBERON:0003075!7.67e-18!86;UBERON:0007284!7.67e-18!86;UBERON:0002346!1.15e-17!90;UBERON:0000970!2.43e-15!20;UBERON:0002104!2.00e-14!21;UBERON:0000019!9.35e-14!19;UBERON:0000047!9.35e-14!19;UBERON:0004088!9.35e-14!19;UBERON:0003072!9.35e-14!19;UBERON:0003071!9.35e-14!19;UBERON:0004128!9.35e-14!19;UBERON:0002780!6.42e-13!41;UBERON:0001890!6.42e-13!41;UBERON:0006240!6.42e-13!41;UBERON:0000020!7.76e-13!23;UBERON:0003080!1.74e-12!42;UBERON:0001032!3.82e-12!24;UBERON:0004456!3.82e-12!24;UBERON:0001456!4.06e-12!21;UBERON:0005743!6.88e-12!86;UBERON:0000966!5.38e-11!5;UBERON:0005388!5.38e-11!5;UBERON:0001802!5.38e-11!5;UBERON:0000073!8.70e-11!94;UBERON:0001016!8.70e-11!94;UBERON:0002791!1.44e-10!33;UBERON:0002114!2.24e-10!12;UBERON:0001893!3.85e-10!34;UBERON:0000033!4.66e-10!123;UBERON:0002420!1.25e-09!9;UBERON:0007245!1.25e-09!9;UBERON:0010009!1.25e-09!9;UBERON:0010011!1.25e-09!9;UBERON:0000454!1.25e-09!9;UBERON:0009663!2.13e-09!7;UBERON:0000153!3.66e-09!129;UBERON:0007811!3.66e-09!129;UBERON:0000488!3.66e-09!4;UBERON:0002020!6.62e-09!34;UBERON:0003528!6.62e-09!34;UBERON:0002075!6.89e-09!18;UBERON:0001264!9.84e-09!10;UBERON:0003922!9.84e-09!10;UBERON:0003923!9.84e-09!10;UBERON:0003924!9.84e-09!10;UBERON:0003921!9.84e-09!10;UBERON:0002108!1.01e-08!14;UBERON:0000955!1.16e-08!69;UBERON:0006238!1.16e-08!69;UBERON:0001017!1.36e-08!82;UBERON:0000369!1.76e-08!4;UBERON:0002435!1.76e-08!4;UBERON:0000204!1.76e-08!4;UBERON:0010082!1.76e-08!4;UBERON:0001869!1.81e-08!32;UBERON:0002616!2.39e-08!59;UBERON:0001737!5.87e-08!9;UBERON:0005085!7.14e-08!29;UBERON:0001049!7.29e-08!57;UBERON:0005068!7.29e-08!57;UBERON:0006241!7.29e-08!57;UBERON:0007135!7.29e-08!57;UBERON:0001045!8.05e-08!11;UBERON:0001048!1.39e-07!168;UBERON:0000924!1.77e-07!173;UBERON:0006601!1.77e-07!173;UBERON:0001781!1.95e-07!3;UBERON:0001782!1.95e-07!3;UBERON:0005424!1.95e-07!3;UBERON:0001778!2.07e-07!3;UBERON:0001775!2.07e-07!3;UBERON:0004121!2.28e-07!169;UBERON:0000481!3.08e-07!347;UBERON:0002308!4.16e-07!9;UBERON:0000125!4.16e-07!9;UBERON:0000063!5.03e-07!97;UBERON:0008947!6.63e-07!38;UBERON:0003258!6.63e-07!38;UBERON:0000064!6.70e-07!219;UBERON:0005383!6.92e-07!3;UBERON:0005382!6.92e-07!3 | ||
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|short_description=p1@ENST00000437916 | |short_description=p1@ENST00000437916 | ||
}} | }} |
Latest revision as of 10:23, 29 July 2015
Short description: | p1@ENST00000437916 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000437916_5end |
Coexpression cluster: | C573_Lens_small_retina_Ciliary_Retinal_eye_putamen |
Association with transcript: | -16bp_to_ENST00000437916_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.38e-15 | 3 |
ciliated cell | 1.59e-15 | 3 |
ciliated epithelial cell | 1.59e-15 | 3 |
multi-ciliated epithelial cell | 1.59e-15 | 3 |
non-pigmented ciliary epithelial cell | 1.59e-15 | 3 |
visual pigment cell | 8.35e-12 | 4 |
pigment cell | 1.64e-11 | 14 |
crystallin accumulating cell | 3.78e-11 | 4 |
vertebrate lens cell | 3.78e-11 | 4 |
lens epithelial cell | 3.78e-11 | 4 |
epithelial cell of gall bladder | 5.84e-10 | 2 |
columnar/cuboidal epithelial cell | 7.14e-10 | 27 |