FFCP PHASE1:Hg19::chr2:241897189..241897221,-: Difference between revisions
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|id=chr2:241897189..241897221,-
|short_description=p@chr2:241897189..241897221,-
|description=CAGE_peak_at_chr2:241897189..241897221,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:241897189..241897221,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr2:241897189..241897221,- | |||
|id=chr2:241897189..241897221,- | |||
|ontology_enrichment_celltype=CL:0000188!1.76e-13!9;CL:0002564!3.54e-12!3;CL:0000594!2.71e-11!3;CL:0002602!8.57e-09!2;CL:0002575!1.85e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002602;2.84e-66;2!CL:0002575;1.17e-17;2!CL:0002564;2.07e-12;3!CL:0000669;1.63e-09;4!CL:0002540;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,2.84e-66,2;CL:0002575,1.07e-17,2;CL:0002564,2.07e-12,3;CL:0000669,1.57e-09,4;CL:0002540,9.49e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002242!3.54e-12!3;UBERON:0003068!3.54e-12!3;UBERON:0002328!3.54e-12!3;UBERON:0004880!3.54e-12!3;UBERON:0009568!8.57e-09!2;UBERON:0002216!8.57e-09!2;UBERON:0002209!8.57e-09!2;UBERON:0002213!8.57e-09!2;UBERON:0004267!8.57e-09!2;UBERON:0006444!8.57e-09!2;UBERON:0001995!8.57e-09!2;UBERON:0004715!8.57e-09!2;UBERON:0001468!8.57e-09!2;UBERON:0001130!8.57e-09!2;UBERON:0001066!8.57e-09!2;UBERON:0000075!9.81e-07!13;UBERON:0005944!9.81e-07!13;UBERON:0004288!9.81e-07!13;UBERON:0003089!9.81e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006444;2.84e-66;2!UBERON:0001995;2.84e-66;2!UBERON:0004715;2.84e-66;2!UBERON:0011135;1.10e-59;5!UBERON:0002216;1.10e-59;5!UBERON:0011134;1.10e-59;5!UBERON:0002209;1.10e-59;5!UBERON:0002213;1.10e-59;5!UBERON:0007844;1.10e-59;5!UBERON:0011138;1.10e-59;5!UBERON:0001130;1.10e-59;5!UBERON:0001066;1.10e-59;5!UBERON:0001468;1.10e-59;5!UBERON:0002418;1.22e-44;3!UBERON:0004755;1.22e-44;3!UBERON:0004905;1.04e-37;8!UBERON:0000982;1.04e-37;8!UBERON:0004770;1.04e-37;8!UBERON:0004765;7.93e-21;26!UBERON:0000075;2.49e-19;16!UBERON:0002242;2.07e-12;3!UBERON:0001434;1.27e-11;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,2.84e-66,2;UBERON:0001995,2.84e-66,2;UBERON:0004715,2.84e-66,2;UBERON:0011135,1.10e-59,5;UBERON:0002216,1.10e-59,5;UBERON:0011134,1.10e-59,5;UBERON:0002209,1.10e-59,5;UBERON:0002213,1.10e-59,5;UBERON:0005856,1.10e-59,5;UBERON:0005866,1.10e-59,5;UBERON:0005863,1.10e-59,5;UBERON:0007844,1.10e-59,5;UBERON:0011138,1.10e-59,5;UBERON:0001130,1.10e-59,5;UBERON:0001066,1.10e-59,5;UBERON:0001468,1.10e-59,5;UBERON:0002418,1.22e-44,3;UBERON:0004755,1.22e-44,3;UBERON:0004905,1.04e-37,8;UBERON:0000982,1.04e-37,8;UBERON:0004770,1.04e-37,8;UBERON:0000075,2.49e-19,16;UBERON:0002242,2.07e-12,3;UBERON:0003068,2.07e-12,3;UBERON:0002328,2.07e-12,3;UBERON:0004880,2.07e-12,3 | |||
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| ||
|short_description=p@chr2:241897189..241897221,- | |||
}} | }} |
Latest revision as of 08:34, 29 July 2015
Short description: | p@chr2:241897189..241897221, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:241897189..241897221, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 2.84e-66 | 2 |
central nervous system pericyte | 1.07e-17 | 2 |
nucleus pulposus cell of intervertebral disc | 2.07e-12 | 3 |
pericyte cell | 1.57e-09 | 4 |
mesenchymal stem cell of the bone marrow | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 2.84e-66 | 2 |
fibrocartilage | 2.84e-66 | 2 |
annulus fibrosus disci intervertebralis | 2.84e-66 | 2 |
intervertebral cartilage | 1.10e-59 | 5 |
symphysis | 1.10e-59 | 5 |
nonsynovial joint | 1.10e-59 | 5 |
fibrous joint | 1.10e-59 | 5 |
cartilaginous joint | 1.10e-59 | 5 |
developing mesenchymal condensation | 1.10e-59 | 5 |
pre-cartilage condensation | 1.10e-59 | 5 |
cartilaginous condensation | 1.10e-59 | 5 |
cartilage element | 1.10e-59 | 5 |
post-cranial axial skeletal system | 1.10e-59 | 5 |
vertebral column | 1.10e-59 | 5 |
intervertebral disk | 1.10e-59 | 5 |
intervertebral joint | 1.10e-59 | 5 |
cartilage tissue | 1.22e-44 | 3 |
skeletal tissue | 1.22e-44 | 3 |
articulation | 1.04e-37 | 8 |
skeletal joint | 1.04e-37 | 8 |
articular system | 1.04e-37 | 8 |
subdivision of skeletal system | 2.49e-19 | 16 |
nucleus pulposus | 2.07e-12 | 3 |
axial mesoderm | 2.07e-12 | 3 |
notochord | 2.07e-12 | 3 |
chordamesoderm | 2.07e-12 | 3 |