FFCP PHASE1:Hg19::chr2:224463169..224463200,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:224463169..224463200,+ | |||
|coexpression_cluster_id=C708 | |||
|description=CAGE_peak_at_chr2:224463169..224463200,+ | |description=CAGE_peak_at_chr2:224463169..224463200,+ | ||
|id=chr2:224463169..224463200,+ | |id=chr2:224463169..224463200,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002564;1.01e-16;3!CL:0000167;4.18e-07;1!CL:0000164;4.18e-07;1!CL:0000502;4.18e-07;1!CL:0000172;4.18e-07;1!CL:0000173;4.18e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,1.16e-16,3;CL:0000167,4.18e-07,1;CL:0000164,4.18e-07,1;CL:0000502,4.18e-07,1;CL:0000172,4.18e-07,1;CL:0000173,4.18e-07,1;CL:0002351,4.18e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.33e-11;2!UBERON:0006601;3.72e-07;82!CL:0002351;4.18e-07;1 | |||
|ontology_enrichment_disease=DOID:171!5.43e-10!10;DOID:169!8.71e-07!6 | |ontology_enrichment_disease=DOID:171!5.43e-10!10;DOID:169!8.71e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:171;9.73e-20;10!DOID:169;6.83e-09;6!DOID:3095;1.19e-08;22!DOID:2994;1.19e-08;22!DOID:4430;4.18e-07;1!DOID:5662;9.78e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.13e-19,10;DOID:169,7.92e-09,6;DOID:3095,1.27e-08,22;DOID:2994,1.27e-08,22;DOID:4430,4.18e-07,1;DOID:5662,8.75e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.32e-36!94;UBERON:0001016!5.32e-36!94;UBERON:0001017!3.91e-34!82;UBERON:0005743!8.15e-32!86;UBERON:0000955!4.88e-30!69;UBERON:0006238!4.88e-30!69;UBERON:0002616!1.97e-29!59;UBERON:0001049!5.65e-29!57;UBERON:0005068!5.65e-29!57;UBERON:0006241!5.65e-29!57;UBERON:0007135!5.65e-29!57;UBERON:0002346!6.48e-27!90;UBERON:0002780!1.31e-24!41;UBERON:0001890!1.31e-24!41;UBERON:0006240!1.31e-24!41;UBERON:0003075!4.75e-24!86;UBERON:0007284!4.75e-24!86;UBERON:0003080!8.31e-24!42;UBERON:0002020!1.98e-20!34;UBERON:0003528!1.98e-20!34;UBERON:0000924!4.71e-20!173;UBERON:0006601!4.71e-20!173;UBERON:0003056!1.21e-19!61;UBERON:0001893!1.80e-18!34;UBERON:0001869!2.27e-18!32;UBERON:0004121!6.80e-18!169;UBERON:0002791!1.94e-17!33;UBERON:0000033!7.64e-17!123;UBERON:0000153!2.14e-15!129;UBERON:0007811!2.14e-15!129;UBERON:0002619!1.41e-14!22;UBERON:0001950!2.03e-12!20;UBERON:0000956!2.50e-12!25;UBERON:0000203!2.50e-12!25;UBERON:0002308!2.37e-10!9;UBERON:0000125!2.37e-10!9;UBERON:0002420!3.11e-10!9;UBERON:0007245!3.11e-10!9;UBERON:0010009!3.11e-10!9;UBERON:0010011!3.11e-10!9;UBERON:0000454!3.11e-10!9;UBERON:0007023!7.37e-10!115;UBERON:0002298!1.79e-08!8;UBERON:0001894!5.94e-08!7;UBERON:0006222!5.94e-08!7;UBERON:0009663!7.09e-08!7;UBERON:0000349!1.19e-07!5;UBERON:0000369!2.73e-07!4;UBERON:0002435!2.73e-07!4;UBERON:0000204!2.73e-07!4;UBERON:0010082!2.73e-07!4;UBERON:0001872!6.15e-07!5;UBERON:0000025!9.17e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.85e-17;5!UBERON:0002216;2.85e-17;5!UBERON:0011134;2.85e-17;5!UBERON:0002209;2.85e-17;5!UBERON:0002213;2.85e-17;5!UBERON:0007844;2.85e-17;5!UBERON:0011138;2.85e-17;5!UBERON:0001130;2.85e-17;5!UBERON:0001066;2.85e-17;5!UBERON:0001468;2.85e-17;5!UBERON:0005383;7.70e-17;3!UBERON:0005382;7.70e-17;3!UBERON:0002242;1.01e-16;3!UBERON:0002346;1.95e-13;4!UBERON:0000923;1.95e-13;4!UBERON:0010316;1.95e-13;4!UBERON:0005291;1.95e-13;4!UBERON:0000369;9.12e-13;4!UBERON:0002435;9.12e-13;4!UBERON:0000204;9.12e-13;4!UBERON:0001873;1.33e-11;2!UBERON:0004905;7.39e-11;8!UBERON:0000982;7.39e-11;8!UBERON:0004770;7.39e-11;8!UBERON:0002050;7.63e-11;5!UBERON:0005423;7.63e-11;5!UBERON:0003528;1.59e-10;34!UBERON:0002020;1.59e-10;34!UBERON:0002420;7.49e-10;9!UBERON:0007245;7.49e-10;9!UBERON:0010009;7.49e-10;9!UBERON:0010011;7.49e-10;9!UBERON:0000454;7.49e-10;9!UBERON:0002791;8.70e-10;32!UBERON:0000125;1.03e-09;9!UBERON:0002308;1.03e-09;9!UBERON:0001869;2.68e-09;32!UBERON:0002780;1.52e-08;41!UBERON:0001890;1.52e-08;41!UBERON:0001893;3.06e-08;34!UBERON:0009663;1.70e-07;7!UBERON:0000073;3.31e-07;53!UBERON:0002616;3.31e-07;53!UBERON:0001874;6.06e-07;1!UBERON:0001282;7.60e-07;1!UBERON:0009842;7.60e-07;1!UBERON:0003704;7.60e-07;1!UBERON:0001171;7.60e-07;1!UBERON:0001172;7.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,3.93e-17,5;UBERON:0002216,3.93e-17,5;UBERON:0011134,3.93e-17,5;UBERON:0002209,3.93e-17,5;UBERON:0002213,3.93e-17,5;UBERON:0005856,3.93e-17,5;UBERON:0005866,3.93e-17,5;UBERON:0005863,3.93e-17,5;UBERON:0007844,3.93e-17,5;UBERON:0011138,3.93e-17,5;UBERON:0001130,3.93e-17,5;UBERON:0001066,3.93e-17,5;UBERON:0001468,3.93e-17,5;UBERON:0005383,1.04e-16,3;UBERON:0005382,1.04e-16,3;UBERON:0002242,1.16e-16,3;UBERON:0003068,1.16e-16,3;UBERON:0002328,1.16e-16,3;UBERON:0004880,1.16e-16,3;UBERON:0001016,2.74e-15,89;UBERON:0001017,2.01e-13,81;UBERON:0000369,1.14e-12,4;UBERON:0002435,1.14e-12,4;UBERON:0000204,1.14e-12,4;UBERON:0010082,1.14e-12,4;UBERON:0000955,2.78e-12,68;UBERON:0006238,2.78e-12,68;UBERON:0000073,3.31e-12,53;UBERON:0002616,3.31e-12,53;UBERON:0001873,1.65e-11,2;UBERON:0010122,1.65e-11,2;UBERON:0001049,1.93e-11,56;UBERON:0005068,1.93e-11,56;UBERON:0006241,1.93e-11,56;UBERON:0007135,1.93e-11,56;UBERON:0002780,2.38e-11,41;UBERON:0001890,2.38e-11,41;UBERON:0003080,2.38e-11,41;UBERON:0006240,2.38e-11,41;UBERON:0003528,4.25e-11,34;UBERON:0002020,4.25e-11,34;UBERON:0002346,4.75e-11,86;UBERON:0004905,9.00e-11,8;UBERON:0000982,9.00e-11,8;UBERON:0004770,9.00e-11,8;UBERON:0011216,1.20e-10,223;UBERON:0002420,8.23e-10,9;UBERON:0007245,8.23e-10,9;UBERON:0010009,8.23e-10,9;UBERON:0010011,8.23e-10,9;UBERON:0000454,8.23e-10,9;UBERON:0000125,1.14e-09,9;UBERON:0002308,1.14e-09,9;UBERON:0002791,1.98e-09,32;UBERON:0001869,1.98e-09,32;UBERON:0004121,2.41e-09,171;UBERON:0000924,2.41e-09,171;UBERON:0006601,2.41e-09,171;UBERON:0001893,8.01e-09,34;UBERON:0009663,1.93e-07,7;UBERON:0003075,3.90e-07,82;UBERON:0007284,3.90e-07,82;UBERON:0003056,4.09e-07,61;UBERON:0001874,6.60e-07,1;UBERON:0001282,7.39e-07,1;UBERON:0009842,7.39e-07,1;UBERON:0003704,7.39e-07,1;UBERON:0001171,7.39e-07,1;UBERON:0001172,7.39e-07,1 | |||
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|short_description=p@chr2:224463169..224463200,+ | |short_description=p@chr2:224463169..224463200,+ | ||
}} | }} |
Latest revision as of 07:07, 29 July 2015
Short description: | p@chr2:224463169..224463200, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:224463169..224463200, + |
Coexpression cluster: | C708_smallcell_peripheral_gastrointestinal_neuroectodermal_Neurons_pituitary_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 1.16e-16 | 3 |
peptide hormone secreting cell | 4.18e-07 | 1 |
enteroendocrine cell | 4.18e-07 | 1 |
type D enteroendocrine cell | 4.18e-07 | 1 |
somatostatin secreting cell | 4.18e-07 | 1 |
pancreatic D cell | 4.18e-07 | 1 |
progenitor cell of endocrine pancreas | 4.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.13e-19 | 10 |
neuroendocrine tumor | 7.92e-09 | 6 |
germ cell and embryonal cancer | 1.27e-08 | 22 |
germ cell cancer | 1.27e-08 | 22 |
somatostatinoma | 4.18e-07 | 1 |
pleomorphic carcinoma | 8.75e-07 | 1 |