FFCP PHASE1:Hg19::chr2:174982800..174982819,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:174982800..174982819,- | |||
|description=CAGE_peak_at_chr2:174982800..174982819,- | |description=CAGE_peak_at_chr2:174982800..174982819,- | ||
|id=chr2:174982800..174982819,- | |id=chr2:174982800..174982819,- | ||
|ontology_enrichment_celltype=CL:0000066!6.61e-14!254;CL:0000077!1.38e-13!19;CL:0000076!2.40e-13!62;CL:0000548!1.27e-09!679;CL:0000004!1.27e-09!679;CL:0000255!1.27e-09!679;CL:0000012!3.14e-09!682;CL:0002321!5.16e-09!248;CL:0000220!1.65e-08!246 | |ontology_enrichment_celltype=CL:0000066!6.61e-14!254;CL:0000077!1.38e-13!19;CL:0000076!2.40e-13!62;CL:0000548!1.27e-09!679;CL:0000004!1.27e-09!679;CL:0000255!1.27e-09!679;CL:0000012!3.14e-09!682;CL:0002321!5.16e-09!248;CL:0000220!1.65e-08!246 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.68e-22;19!CL:0000349;1.79e-15;19!CL:0000076;2.21e-09;63!CL:0002537;2.27e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.10e-22,19;CL:0000076,6.92e-19,63;CL:0000349,2.07e-15,19;CL:0000066,3.81e-14,253;CL:0002537,2.45e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.81e-10!239;DOID:162!3.23e-09!235;DOID:0050687!1.76e-08!143;DOID:305!1.77e-07!106;DOID:1749!2.52e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.90e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.79e-12,14;DOID:14566,5.80e-11,239;DOID:162,7.97e-10,235;DOID:305,2.95e-08,106;DOID:0050687,1.02e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0005631!6.24e-11!14;UBERON:0000158!6.24e-11!14;UBERON:0005156!9.45e-11!59;UBERON:0000990!9.45e-11!59;UBERON:0003133!8.40e-09!48;UBERON:0003134!9.00e-09!37;UBERON:0000474!9.00e-09!37;UBERON:0000478!1.53e-08!24;UBERON:0004871!5.06e-07!8;UBERON:0003100!5.34e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.90e-14;10!UBERON:0000158;5.90e-14;10!UBERON:0000478;7.80e-13;24!UBERON:0000305;3.65e-10;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.13e-17,14;UBERON:0000158,2.13e-17,14;UBERON:0000478,8.44e-13,24;UBERON:0004871,8.40e-11,8;UBERON:0000305,5.54e-10,7;UBERON:0004923,1.14e-09,66;UBERON:0003124,4.58e-09,7;UBERON:0000995,2.97e-08,21;UBERON:0005795,1.00e-07,22;UBERON:0003975,1.00e-07,22;UBERON:0005156,2.06e-07,59;UBERON:0000990,2.06e-07,59 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,2.53299878168311,0,0,0,0,3.05817920982241,1.05506791291381,0.37129905888014,0,0.672325146451775,0.602694528023977,0.730310090387373,1.95173119516203,0.246242116153576,0,0,0,0,0,0,0,0,0,0,1.70297735647684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0.488124115096339,1.10298924103761,0,0.535798369704479,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0,0,0,0,0,0.933633106199299,0.67355336034844,0.490385709340376,0,0,2.34321431833797,0.312160076830321,0,0.298897361103602,0,0,0.280901613404497,0,0.737005903870608,0.103325781175765,0,0.247266929278557,1.82032272387605,0.718618141816238,1.0100166837244,0.125118519871964,0,0,0.30648779579902,0,0,0,0.427114777637135,0.423863802319124,0.900273288253207,1.23663035086127,0.257640540045629,0.744467425326359,0.168776332241266,0,0.252433774244115,1.10459878370759,3.55621325001386,0,0,0.847802961552438,7.92369497969517,3.00020732649918,4.30206893083506,1.70763188581434,1.19276791489337,0.813357600086629,0.725627385107593,1.51392510525377,0.72995471815166,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.330881918197182,0,1.42362371466658,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0.8231480226628,0,0,0,0,0,0.491953754172454,1.3725424823882,0.219500570817251,1.1240175325762,2.71428225511403,2.77765335475589,0.977424915930974,1.03993478527958,1.44331342025273,0,1.40890433082986,0,0,0.190254152234598,0,0,0,0,0,4.68669169933885,2.18376766658517,3.54437743105966,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,1.71072446022705,0.102827492703324,0,0,0.336393253036082,0.43596006883328,1.0267360014933,3.10252117818667,0,0,5.05282421511254,3.12022310734098,0.771622122786426,0,0.266422179016099,1.14382394926518,2.17048642156577,0.823240336780769,0.65147236858747,1.42156779497018,1.58390374586686,1.20575750823834,6.10073421020206,1.09970290300263,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,2.00068208423871,0.271265023699736,0.207970861530807,0,0.315404830067869,0.234282829985426,0,0,1.03473071292505,0,0.184369168541703,0.60818530127658,0.195801157462741,0.343143423810856,0,0,0,1.21251028578504,1.66435439510497,3.62868351995616,0,0,0.280660094433074,0.128139149255701,0,0,0,0.308419387605311,0.532685175939381,0.164254312027618,1.03850885836724,0.232420756919918,0.120859449591622,0,0.0920809889358963,1.37777337797528,2.00300284807389,3.14698595902618,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.215915916102139,0,0.812839312631559,0.501689773854853,0,0,0.447749509444357,0,0,0,4.26419039409617,2.27764876265012,0.103041011647722,0,0,1.14853107599234,1.30012049207304,1.6068392984416,0.193341436584244,0.308097234229289,0.767518373630648,0.413509717453592,2.47066563197029,2.0302337147992,0.340906509664404,0.356128142586949,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0.372158369359667,0.316379424718726,2.85945290885737,0.255897791311334,0.42793898803392,0,0,6.65528093058265,5.76527762445715,2.82749765629647,0.202182481573316,0,0.421258456238981,0.48763373908959,0,0,0.9554993798559,2.54529777516683,0,0,0,0,0,0.655894752046633,0,0,0,1.57752487424457,2.06322986127554,0.35667105148125,2.83808851256478,0,0,1.13841952129715,2.0996083214699,0.288666338176536,0,0,0.188287601553558,0.86101074534246,0,0.886860307073351,1.83778720165568,0,0,0,0,0,0,0,0,0.106824071127473,0,21.8085792223118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,66.3709667570778,32.6661148915902,159.723565091601,0,0,13.4683533077716,0,0,0.19924798825107,0,0,28.8397684656077,0,0,0.988551862620595,0.358042349351218,0,0.394573622547734,0,0,0,0,0,0,0,0,1.593108275997,18.5605164713719,0,0,1.16641845353302,0,0,0,0,0,0,0,0,9.75966209950223,0.230850775511391,2.39278317278703,0.23056390438806,0.807818799687949,0,32.5381182926558,2.10674464824283,18.1231823846336,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0,0,0,0.182454789215666,0.978323094660449,0,0,0,0,0,1.20258735531594,0.622129148383483,0,0,0.313932918407225,0,0,0,0,3.23374911467446,15.14830194499,0,0,1.16107597546902,0.803982487948041,0.246346371159628,0.0969890164884194,0,0,6.71505430769079,0.993573058514948,0,1.17330829640882,2.56508224804908,0,18.7821033007202,0,0.114536596165916,0,0,1.61528296235062,0,6.11568927331263,5.64855370086599,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.91238538399582,6.46435352006999,5.81616473240859,0,0,0,0.335434687599266,0,0,52.2721665771062,0,28.4034492032779,0,0,0,5.42999601753713,8.64221491201268,3.26587360109409,19.156830649998,2.05231301873347,1.19271615249795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| ||
|short_description=p@chr2:174982800..174982819,- | |short_description=p@chr2:174982800..174982819,- | ||
}} | }} |
Latest revision as of 02:37, 29 July 2015
Short description: | p@chr2:174982800..174982819, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:174982800..174982819, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.10e-22 | 19 |
squamous epithelial cell | 6.92e-19 | 63 |
extraembryonic cell | 2.07e-15 | 19 |
epithelial cell | 3.81e-14 | 253 |
amnion mesenchymal stem cell | 2.45e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.13e-17 | 14 |
membranous layer | 2.13e-17 | 14 |
extraembryonic structure | 8.44e-13 | 24 |
somatic layer of lateral plate mesoderm | 8.40e-11 | 8 |
amnion | 5.54e-10 | 7 |
organ component layer | 1.14e-09 | 66 |
chorion | 4.58e-09 | 7 |
uterus | 2.97e-08 | 21 |
embryonic uterus | 1.00e-07 | 22 |
internal female genitalia | 1.00e-07 | 22 |
reproductive structure | 2.06e-07 | 59 |
reproductive system | 2.06e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.79e-12 | 14 |
disease of cellular proliferation | 5.80e-11 | 239 |
cancer | 7.97e-10 | 235 |
carcinoma | 2.95e-08 | 106 |
cell type cancer | 1.02e-07 | 143 |