FFCP PHASE1:Hg19::chr22:48134043..48134048,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr22:48134043..48134048,+ | |||
|coexpression_cluster_id=C212 | |||
|description=CAGE_peak_at_chr22:48134043..48134048,+ | |||
|id=chr22:48134043..48134048,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.10e-09;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.81e-40;1!DOID:3112;1.81e-40;1!DOID:3149;1.81e-40;1!DOID:3451;5.15e-21;2!DOID:4159;5.15e-21;2!DOID:0060122;5.15e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,9.91e-41,1;DOID:3151,2.21e-40,1;DOID:3149,2.21e-40,1;DOID:3451,5.70e-21,2;DOID:4159,5.70e-21,2;DOID:0060122,5.70e-21,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.81e-40;1!UBERON:0000026;1.81e-40;1!UBERON:0008784;1.81e-40;1!UBERON:0006058;1.81e-40;1!UBERON:0003663;1.81e-40;1!UBERON:0004256;1.81e-40;1!UBERON:0004708;1.81e-40;1!UBERON:0002101;1.81e-40;1!UBERON:0004709;1.81e-40;1!UBERON:0002529;1.81e-40;1!UBERON:0010538;1.81e-40;1!UBERON:0003661;1.81e-40;1!UBERON:0010890;1.81e-40;1!UBERON:0002471;1.81e-40;1!UBERON:0001383;1.81e-40;1!UBERON:0010758;1.81e-40;1!UBERON:0010707;1.81e-40;1!UBERON:0000978;1.81e-40;1!UBERON:0002103;1.81e-40;1!UBERON:0001665;1.81e-40;1!UBERON:0003823;1.81e-40;1!UBERON:0000154;1.81e-40;1!UBERON:0010709;1.81e-40;1!UBERON:0005090;5.15e-21;2!UBERON:0001630;5.15e-21;2!UBERON:0000014;3.26e-11;4!UBERON:0002046;3.10e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.30e-40,1;UBERON:0001389,3.30e-40,1;UBERON:0000026,3.30e-40,1;UBERON:0008784,3.30e-40,1;UBERON:0006058,3.30e-40,1;UBERON:0003663,3.30e-40,1;UBERON:0004256,3.30e-40,1;UBERON:0004708,3.30e-40,1;UBERON:0002101,3.30e-40,1;UBERON:0004709,3.30e-40,1;UBERON:0002529,3.30e-40,1;UBERON:0010538,3.30e-40,1;UBERON:0003661,3.30e-40,1;UBERON:0010890,3.30e-40,1;UBERON:0002471,3.30e-40,1;UBERON:0001383,3.30e-40,1;UBERON:0004357,3.30e-40,1;UBERON:0004347,3.30e-40,1;UBERON:0005420,3.30e-40,1;UBERON:0005732,3.30e-40,1;UBERON:0010758,3.30e-40,1;UBERON:0010707,3.30e-40,1;UBERON:0000978,3.30e-40,1;UBERON:0002103,3.30e-40,1;UBERON:0001665,3.30e-40,1;UBERON:0003823,3.30e-40,1;UBERON:0000154,3.30e-40,1;UBERON:0010709,3.30e-40,1;UBERON:0005733,3.30e-40,1;UBERON:0005730,3.30e-40,1;UBERON:0005090,6.96e-21,2;UBERON:0001630,6.96e-21,2;UBERON:0000014,3.42e-11,4;UBERON:0002046,2.74e-09,5;UBERON:0004117,2.74e-09,5;UBERON:0007689,2.74e-09,5;UBERON:0007123,2.74e-09,5;UBERON:0003091,2.74e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,1.46062018077475,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.290796477559129,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0.32592226663359,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.28853842595289,0,0,0,0,0,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0.333698283423817,0.19538809540204,0.278406173895242,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,9.53619473882272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0.264768380074501,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,1.34173875039706,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.244052529803926,0.1251909307065,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0.657852148736121,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,1.96526301012116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0.829169439458779,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr22:48134043..48134048,+ | |||
}} |
Latest revision as of 22:13, 28 July 2015
Short description: | p@chr22:48134043..48134048, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:48134043..48134048, + |
Coexpression cluster: | C212_chronic_acute_Whole_Reticulocytes_leukemia_blood_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 3.30e-40 | 1 |
soleus muscle | 3.30e-40 | 1 |
appendage | 3.30e-40 | 1 |
lower limb segment | 3.30e-40 | 1 |
multi-limb segment region | 3.30e-40 | 1 |
hindlimb muscle | 3.30e-40 | 1 |
hindlimb zeugopod muscle | 3.30e-40 | 1 |
paired limb/fin | 3.30e-40 | 1 |
limb | 3.30e-40 | 1 |
pelvic appendage | 3.30e-40 | 1 |
limb segment | 3.30e-40 | 1 |
paired limb/fin segment | 3.30e-40 | 1 |
limb muscle | 3.30e-40 | 1 |
pelvic complex muscle | 3.30e-40 | 1 |
zeugopod | 3.30e-40 | 1 |
muscle of leg | 3.30e-40 | 1 |
paired limb/fin bud | 3.30e-40 | 1 |
limb bud | 3.30e-40 | 1 |
pelvic appendage bud | 3.30e-40 | 1 |
limb/fin field | 3.30e-40 | 1 |
subdivision of organism along appendicular axis | 3.30e-40 | 1 |
appendage girdle complex | 3.30e-40 | 1 |
leg | 3.30e-40 | 1 |
hindlimb | 3.30e-40 | 1 |
triceps surae | 3.30e-40 | 1 |
hindlimb zeugopod | 3.30e-40 | 1 |
posterior region of body | 3.30e-40 | 1 |
pelvic complex | 3.30e-40 | 1 |
limb field | 3.30e-40 | 1 |
hindlimb/pelvic fin field | 3.30e-40 | 1 |
muscle structure | 6.96e-21 | 2 |
muscle organ | 6.96e-21 | 2 |
zone of skin | 3.42e-11 | 4 |
thyroid gland | 2.74e-09 | 5 |
pharyngeal pouch | 2.74e-09 | 5 |
thyroid diverticulum | 2.74e-09 | 5 |
pharyngeal pouch 2 | 2.74e-09 | 5 |
thyroid primordium | 2.74e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 9.91e-41 | 1 |
skin squamous cell carcinoma | 2.21e-40 | 1 |
keratoacanthoma | 2.21e-40 | 1 |
skin carcinoma | 5.70e-21 | 2 |
skin cancer | 5.70e-21 | 2 |
integumentary system cancer | 5.70e-21 | 2 |