FFCP PHASE1:Hg19::chr22:47045775..47045789,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:47045775..47045789,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr22:47045775..47045789,+ | |description=CAGE_peak_at_chr22:47045775..47045789,+ | ||
|id=chr22:47045775..47045789,+ | |id=chr22:47045775..47045789,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002195;7.67e-19;2!CL:0002571;7.67e-19;2!CL:0000167;4.06e-10;1!CL:0000164;4.06e-10;1!CL:0000502;4.06e-10;1!CL:0000172;4.06e-10;1!CL:0002553;4.06e-10;1!CL:0000173;4.06e-10;1!CL:0000182;2.56e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,7.68e-19,2;CL:0002571,7.68e-19,2;CL:0002553,3.71e-10,1;CL:0000167,4.44e-10,1;CL:0000164,4.44e-10,1;CL:0000502,4.44e-10,1;CL:0000172,4.44e-10,1;CL:0000173,4.44e-10,1;CL:0002351,4.44e-10,1;CL:0000182,2.56e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002351;4.06e-10;1 | |||
|ontology_enrichment_disease=DOID:1036!9.31e-11!8 | |ontology_enrichment_disease=DOID:1036!9.31e-11!8 | ||
|ontology_enrichment_disease_v019=DOID:114;5.82e-18;2!DOID:4430;4.06e-10;1!DOID:178;7.54e-10;1!DOID:326;7.54e-10;1!DOID:3978;7.54e-10;1!DOID:3394;7.54e-10;1!DOID:5844;7.54e-10;1!DOID:1287;1.89e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.35e-18,2;DOID:4430,4.44e-10,1;DOID:178,7.55e-10,1;DOID:326,7.55e-10,1;DOID:3978,7.55e-10,1;DOID:3394,7.55e-10,1;DOID:5844,7.55e-10,1;DOID:1287,1.97e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-23!115;UBERON:0004921!5.39e-11!129;UBERON:0004185!5.39e-11!129;UBERON:0002368!7.74e-10!35;UBERON:0002530!1.28e-09!59;UBERON:0003929!1.85e-09!54;UBERON:0001007!2.67e-09!155;UBERON:0001555!2.67e-09!155;UBERON:0007026!2.67e-09!155;UBERON:0004119!1.65e-08!169;UBERON:0000925!1.65e-08!169;UBERON:0006595!1.65e-08!169;UBERON:0005057!3.02e-08!26;UBERON:0005911!3.81e-08!82;UBERON:0002107!5.00e-08!19;UBERON:0006925!5.00e-08!19;UBERON:0008836!5.00e-08!19;UBERON:0009854!6.49e-08!23;UBERON:0000949!5.83e-07!45;UBERON:0000077!7.42e-07!130;UBERON:0009856!8.76e-07!26 | |ontology_enrichment_uberon=UBERON:0007023!1.38e-23!115;UBERON:0004921!5.39e-11!129;UBERON:0004185!5.39e-11!129;UBERON:0002368!7.74e-10!35;UBERON:0002530!1.28e-09!59;UBERON:0003929!1.85e-09!54;UBERON:0001007!2.67e-09!155;UBERON:0001555!2.67e-09!155;UBERON:0007026!2.67e-09!155;UBERON:0004119!1.65e-08!169;UBERON:0000925!1.65e-08!169;UBERON:0006595!1.65e-08!169;UBERON:0005057!3.02e-08!26;UBERON:0005911!3.81e-08!82;UBERON:0002107!5.00e-08!19;UBERON:0006925!5.00e-08!19;UBERON:0008836!5.00e-08!19;UBERON:0009854!6.49e-08!23;UBERON:0000949!5.83e-07!45;UBERON:0000077!7.42e-07!130;UBERON:0009856!8.76e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.08e-22;19!UBERON:0006925;2.08e-22;19!UBERON:0002368;2.05e-19;33!UBERON:0000007;5.82e-18;2!UBERON:0002423;7.37e-17;25!UBERON:0002365;3.28e-13;31!UBERON:0002330;3.28e-13;31!UBERON:0000949;3.40e-12;43!UBERON:0002134;1.98e-10;1!UBERON:0005208;1.98e-10;1!UBERON:0004145;1.98e-10;1!UBERON:0005946;1.98e-10;1!UBERON:0005965;1.98e-10;1!UBERON:0002078;1.98e-10;1!UBERON:0003296;1.89e-09;4!UBERON:0010133;1.89e-09;4!UBERON:0002530;4.36e-07;57!UBERON:0005172;8.82e-07;52!UBERON:0005173;8.82e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.08e-22,19;UBERON:0006925,2.08e-22,19;UBERON:0008836,2.08e-22,19;UBERON:0008835,2.95e-19,22;UBERON:0003894,2.95e-19,22;UBERON:0002368,3.09e-19,35;UBERON:0009854,2.18e-18,23;UBERON:0000007,4.48e-18,2;UBERON:0007499,7.38e-17,25;UBERON:0009497,7.38e-17,25;UBERON:0000015,7.38e-17,25;UBERON:0002423,7.38e-17,25;UBERON:0006235,7.38e-17,25;UBERON:0004161,7.38e-17,25;UBERON:0009856,3.50e-16,26;UBERON:0000949,1.12e-14,45;UBERON:0002365,1.89e-13,31;UBERON:0002330,1.89e-13,31;UBERON:0002530,6.91e-11,59;UBERON:0002134,1.98e-10,1;UBERON:0005208,1.98e-10,1;UBERON:0005946,1.98e-10,1;UBERON:0005965,1.98e-10,1;UBERON:0002078,1.98e-10,1;UBERON:0003296,1.66e-09,4;UBERON:0010133,1.66e-09,4;UBERON:0003929,2.18e-07,54;UBERON:0005172,2.18e-07,54;UBERON:0005173,2.18e-07,54;UBERON:0001041,5.41e-07,87 | |||
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| ||
|short_description=p@chr22:47045775..47045789,+ | |short_description=p@chr22:47045775..47045789,+ | ||
}} | }} |
Latest revision as of 22:11, 28 July 2015
Short description: | p@chr22:47045775..47045789, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:47045775..47045789, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 7.68e-19 | 2 |
hepatic mesenchymal stem cell | 7.68e-19 | 2 |
lung fibroblast | 3.71e-10 | 1 |
peptide hormone secreting cell | 4.44e-10 | 1 |
enteroendocrine cell | 4.44e-10 | 1 |
type D enteroendocrine cell | 4.44e-10 | 1 |
somatostatin secreting cell | 4.44e-10 | 1 |
pancreatic D cell | 4.44e-10 | 1 |
progenitor cell of endocrine pancreas | 4.44e-10 | 1 |
hepatocyte | 2.56e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.08e-22 | 19 |
digestive gland | 2.08e-22 | 19 |
liver bud | 2.08e-22 | 19 |
hepatic diverticulum | 2.95e-19 | 22 |
liver primordium | 2.95e-19 | 22 |
endocrine gland | 3.09e-19 | 35 |
digestive tract diverticulum | 2.18e-18 | 23 |
pituitary gland | 4.48e-18 | 2 |
epithelial sac | 7.38e-17 | 25 |
epithelium of foregut-midgut junction | 7.38e-17 | 25 |
anatomical boundary | 7.38e-17 | 25 |
hepatobiliary system | 7.38e-17 | 25 |
foregut-midgut junction | 7.38e-17 | 25 |
septum transversum | 7.38e-17 | 25 |
sac | 3.50e-16 | 26 |
endocrine system | 1.12e-14 | 45 |
exocrine gland | 1.89e-13 | 31 |
exocrine system | 1.89e-13 | 31 |
gland | 6.91e-11 | 59 |
tricuspid valve | 1.98e-10 | 1 |
right atrium valve | 1.98e-10 | 1 |
outflow tract of atrium | 1.98e-10 | 1 |
outflow part of right atrium | 1.98e-10 | 1 |
right cardiac atrium | 1.98e-10 | 1 |
gland of diencephalon | 1.66e-09 | 4 |
neuroendocrine gland | 1.66e-09 | 4 |
gut epithelium | 2.18e-07 | 54 |
abdomen element | 2.18e-07 | 54 |
abdominal segment element | 2.18e-07 | 54 |
foregut | 5.41e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.35e-18 | 2 |
somatostatinoma | 4.44e-10 | 1 |
vascular disease | 7.55e-10 | 1 |
ischemia | 7.55e-10 | 1 |
extrinsic cardiomyopathy | 7.55e-10 | 1 |
myocardial ischemia | 7.55e-10 | 1 |
myocardial infarction | 7.55e-10 | 1 |
cardiovascular system disease | 1.97e-09 | 4 |