FFCP PHASE1:Hg19::chr20:36784334..36784364,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:36784334..36784364,-
|short_description=p@chr20:36784334..36784364,-
|description=CAGE_peak_at_chr20:36784334..36784364,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:36784334..36784364,- | |||
|coexpression_cluster_id=C454 | |||
|description=CAGE_peak_at_chr20:36784334..36784364,- | |||
|id=chr20:36784334..36784364,- | |||
|ontology_enrichment_celltype=CL:0000222!5.40e-12!119;CL:0000192!1.64e-10!42;CL:0000514!1.64e-10!42;CL:0000115!2.91e-09!35;CL:0000359!7.50e-09!32;CL:0002139!1.14e-08!24;CL:0000187!2.92e-08!54;CL:0002078!3.86e-08!44;CL:0000183!5.22e-08!59;CL:0000680!3.80e-07!57;CL:0000056!3.80e-07!57;CL:0000355!3.80e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.48e-11;32!CL:0000349;4.81e-10;19!CL:0000115;7.02e-09;36!CL:0000192;8.24e-09;43!CL:0002139;5.11e-08;24!CL:0000071;4.29e-07;18!CL:0002594;4.44e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.72e-12,32;CL:0000192,2.41e-12,43;CL:0000514,2.41e-12,43;CL:0000222,8.14e-12,121;CL:0000349,3.83e-10,19;CL:0000115,8.27e-10,36;CL:0000187,3.20e-09,55;CL:0000680,2.08e-08,58;CL:0000056,2.08e-08,58;CL:0000355,2.08e-08,58;CL:0002078,9.38e-08,45;CL:0000393,1.10e-07,61;CL:0000211,1.10e-07,61;CL:0002139,1.42e-07,24;CL:0002594,3.88e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;8.24e-09;43!CL:0002546;4.29e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!8.21e-23!79;UBERON:0007798!8.21e-23!79;UBERON:0000055!4.66e-20!69;UBERON:0003914!1.00e-19!118;UBERON:0001981!1.23e-18!60;UBERON:0007500!1.23e-18!60;UBERON:0004537!1.23e-18!60;UBERON:0006965!1.23e-18!60;UBERON:0004872!1.53e-18!84;UBERON:0000477!4.12e-18!286;UBERON:0000490!1.48e-16!138;UBERON:0000468!1.70e-15!659;UBERON:0001009!3.92e-15!113;UBERON:0004111!8.01e-15!241;UBERON:0000467!1.05e-14!625;UBERON:0000480!1.59e-14!626;UBERON:0004535!6.59e-14!110;UBERON:0000119!7.59e-14!312;UBERON:0000483!2.04e-13!309;UBERON:0005256!1.52e-12!143;UBERON:0002100!3.69e-12!216;UBERON:0001637!1.08e-11!42;UBERON:0003509!1.08e-11!42;UBERON:0004572!1.08e-11!42;UBERON:0000025!1.18e-10!194;UBERON:0002050!1.61e-10!605;UBERON:0005423!1.61e-10!605;UBERON:0000923!3.36e-10!604;UBERON:0005291!3.36e-10!604;UBERON:0006598!3.36e-10!604;UBERON:0002532!3.36e-10!604;UBERON:0000481!3.72e-10!347;UBERON:0005631!3.86e-10!14;UBERON:0000158!3.86e-10!14;UBERON:0000922!5.49e-10!612;UBERON:0000926!9.35e-10!448;UBERON:0004120!9.35e-10!448;UBERON:0006603!9.35e-10!448;UBERON:0003104!1.33e-09!238;UBERON:0009142!1.33e-09!238;UBERON:0004573!1.20e-08!33;UBERON:0004571!1.20e-08!33;UBERON:0004119!1.69e-08!169;UBERON:0000925!1.69e-08!169;UBERON:0006595!1.69e-08!169;UBERON:0000475!2.69e-08!365;UBERON:0004923!5.60e-08!57;UBERON:0002385!4.86e-07!63;UBERON:0001015!4.86e-07!63;UBERON:0000383!4.86e-07!63;UBERON:0003124!4.99e-07!7;UBERON:0003929!8.28e-07!54;UBERON:0003064!8.76e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.19e-12;42!UBERON:0003509;5.19e-12;42!UBERON:0004572;5.19e-12;42!UBERON:0000077;2.15e-11;27!UBERON:0007500;6.81e-11;56!UBERON:0001981;6.81e-11;56!UBERON:0004537;6.81e-11;56!UBERON:0000055;1.06e-09;65!UBERON:0002049;1.66e-09;75!UBERON:0007798;1.66e-09;75!UBERON:0004573;2.29e-09;33!UBERON:0004571;2.29e-09;33!UBERON:0003914;3.61e-09;74!UBERON:0000478;9.09e-09;24!UBERON:0001987;1.19e-07;4!UBERON:0005631;1.63e-07;10!UBERON:0000158;1.63e-07;10!UBERON:0003937;1.83e-07;12!UBERON:0005399;1.83e-07;12!UBERON:0001135;4.05e-07;15!UBERON:0004638;4.29e-07;18!UBERON:0001986;4.29e-07;18!UBERON:0004852;4.29e-07;18!UBERON:0001310;4.44e-07;4 | |||
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| ||
|short_description=p@chr20:36784334..36784364,- | |||
}} | }} |
Latest revision as of 13:51, 28 July 2015
Short description: | p@chr20:36784334..36784364, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36784334..36784364, - |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.72e-12 | 32 |
smooth muscle cell | 2.41e-12 | 43 |
smooth muscle myoblast | 2.41e-12 | 43 |
mesodermal cell | 8.14e-12 | 121 |
extraembryonic cell | 3.83e-10 | 19 |
endothelial cell | 8.27e-10 | 36 |
muscle cell | 3.20e-09 | 55 |
muscle precursor cell | 2.08e-08 | 58 |
myoblast | 2.08e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.08e-08 | 58 |
meso-epithelial cell | 9.38e-08 | 45 |
electrically responsive cell | 1.10e-07 | 61 |
electrically active cell | 1.10e-07 | 61 |
endothelial cell of vascular tree | 1.42e-07 | 24 |
smooth muscle cell of the umbilical artery | 3.88e-07 | 4 |