FFCP PHASE1:Hg19::chr20:36768004..36768016,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:36768004..36768016,- | |||
|coexpression_cluster_id=C454 | |||
|description=CAGE_peak_at_chr20:36768004..36768016,- | |||
|id=chr20:36768004..36768016,- | |||
|ontology_enrichment_celltype=CL:0000192!6.95e-13!42;CL:0000514!6.95e-13!42;CL:0000222!2.23e-11!119;CL:0000115!6.23e-11!35;CL:0000359!1.84e-09!32;CL:0002139!2.76e-09!24;CL:0000187!1.38e-08!54;CL:0000183!2.02e-08!59;CL:0002078!3.25e-08!44;CL:0000680!3.76e-08!57;CL:0000056!3.76e-08!57;CL:0000355!3.76e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0000349;8.53e-15;19!CL:0000359;9.45e-12;32!CL:0002595;5.60e-08;5!CL:0002577;7.32e-08;3!CL:0002541;1.42e-07;3!CL:0000192;1.48e-07;43!CL:1000746;2.40e-07;7!CL:1000612;2.40e-07;7!CL:0002188;5.10e-07;5!CL:0000115;6.89e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.68e-15,19;CL:0000359,3.27e-12,32;CL:0000192,1.12e-10,43;CL:0000514,1.12e-10,43;CL:0000222,5.52e-10,121;CL:0002577,5.31e-08,3;CL:0002595,6.36e-08,5;CL:1000746,1.46e-07,7;CL:1000612,1.46e-07,7;CL:0002541,1.71e-07,3;CL:0000115,1.72e-07,36;CL:0002188,1.90e-07,5;CL:0000187,1.99e-07,55;CL:0000680,7.77e-07,58;CL:0000056,7.77e-07,58;CL:0000355,7.77e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.48e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.55e-24!118;UBERON:0002049!5.46e-21!79;UBERON:0007798!5.46e-21!79;UBERON:0000055!2.26e-20!69;UBERON:0004872!4.52e-19!84;UBERON:0001981!4.08e-18!60;UBERON:0007500!4.08e-18!60;UBERON:0004537!4.08e-18!60;UBERON:0006965!4.08e-18!60;UBERON:0001009!3.67e-16!113;UBERON:0004111!4.31e-16!241;UBERON:0000477!1.40e-15!286;UBERON:0000490!2.27e-15!138;UBERON:0004535!1.05e-14!110;UBERON:0005256!3.79e-14!143;UBERON:0000119!9.49e-13!312;UBERON:0000483!1.69e-12!309;UBERON:0000025!2.39e-12!194;UBERON:0002100!2.49e-12!216;UBERON:0001637!8.77e-12!42;UBERON:0003509!8.77e-12!42;UBERON:0004572!8.77e-12!42;UBERON:0000468!2.43e-11!659;UBERON:0000481!2.15e-10!347;UBERON:0000926!1.14e-09!448;UBERON:0004120!1.14e-09!448;UBERON:0006603!1.14e-09!448;UBERON:0003104!2.01e-09!238;UBERON:0009142!2.01e-09!238;UBERON:0005631!2.10e-09!14;UBERON:0000158!2.10e-09!14;UBERON:0000467!5.49e-09!625;UBERON:0000480!7.26e-09!626;UBERON:0004573!9.14e-09!33;UBERON:0004571!9.14e-09!33;UBERON:0003103!1.29e-08!69;UBERON:0000478!3.09e-08!24;UBERON:0003064!9.62e-08!37;UBERON:0006554!1.16e-07!44;UBERON:0002385!2.39e-07!63;UBERON:0001015!2.39e-07!63;UBERON:0000383!2.39e-07!63;UBERON:0001008!2.79e-07!45;UBERON:0001134!2.85e-07!61;UBERON:0002036!2.85e-07!61;UBERON:0003082!2.85e-07!61;UBERON:0002050!3.11e-07!605;UBERON:0005423!3.11e-07!605;UBERON:0003081!3.60e-07!216;UBERON:0003124!3.84e-07!7;UBERON:0000923!4.94e-07!604;UBERON:0005291!4.94e-07!604;UBERON:0006598!4.94e-07!604;UBERON:0002532!4.94e-07!604;UBERON:0000486!7.17e-07!82;UBERON:0000922!7.22e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.99e-15;24!UBERON:0003513;8.09e-12;7!UBERON:0005631;3.69e-10;10!UBERON:0000158;3.69e-10;10!UBERON:0004573;1.36e-09;33!UBERON:0004571;1.36e-09;33!UBERON:0001987;1.65e-09;4!UBERON:0001637;3.26e-09;42!UBERON:0003509;3.26e-09;42!UBERON:0004572;3.26e-09;42!UBERON:0003914;4.01e-09;74!UBERON:0002049;2.51e-08;75!UBERON:0007798;2.51e-08;75!UBERON:0000353;4.68e-08;15!UBERON:0003834;5.60e-08;5!UBERON:0001533;5.60e-08;5!UBERON:0003124;1.42e-07;3!UBERON:0000920;1.42e-07;3!UBERON:0000074;2.40e-07;7!UBERON:0001229;2.40e-07;7!UBERON:0007100;7.72e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.07e-21,117;UBERON:0004872,1.61e-18,83;UBERON:0005631,1.20e-17,14;UBERON:0000158,1.20e-17,14;UBERON:0002049,1.36e-17,78;UBERON:0007798,1.36e-17,78;UBERON:0000055,1.62e-16,68;UBERON:0001009,8.92e-16,112;UBERON:0003124,1.21e-15,7;UBERON:0000478,1.96e-15,24;UBERON:0007500,2.71e-15,59;UBERON:0001981,2.71e-15,59;UBERON:0004537,2.71e-15,59;UBERON:0006965,2.71e-15,59;UBERON:0004535,4.29e-14,109;UBERON:0001637,9.23e-13,42;UBERON:0003509,9.23e-13,42;UBERON:0004572,9.23e-13,42;UBERON:0003513,9.14e-12,7;UBERON:0003104,9.49e-11,160;UBERON:0009142,9.49e-11,160;UBERON:0003081,1.54e-10,203;UBERON:0005256,3.07e-10,122;UBERON:0004573,3.79e-10,33;UBERON:0004571,3.79e-10,33;UBERON:0000490,4.67e-10,148;UBERON:0000025,7.27e-10,192;UBERON:0001987,7.85e-10,4;UBERON:0004340,7.85e-10,4;UBERON:0004111,3.40e-09,240;UBERON:0007503,9.62e-09,78;UBERON:0000353,3.27e-08,15;UBERON:0003834,6.36e-08,5;UBERON:0001533,6.36e-08,5;UBERON:0000483,1.02e-07,306;UBERON:0010532,1.46e-07,7;UBERON:0000074,1.46e-07,7;UBERON:0001229,1.46e-07,7;UBERON:0001230,1.46e-07,7;UBERON:0003220,1.46e-07,7;UBERON:0005749,1.46e-07,7;UBERON:0004199,1.46e-07,7;UBERON:0004209,1.46e-07,7;UBERON:0004198,1.46e-07,7;UBERON:0000119,1.60e-07,309;UBERON:0000920,1.71e-07,3;UBERON:0000058,1.82e-07,19;UBERON:0000926,3.37e-07,315;UBERON:0004120,3.37e-07,315;UBERON:0006603,3.37e-07,315;UBERON:0006554,7.50e-07,47 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.281908808191942,1.0007329835313,0.893922188854576,4.36169262050184,0,0,0,0.737201809504527,0.697801167972428,1.96597234917155,3.69273769519835,0,0,2.01697543935533,1.80808358407193,0.730310090387373,2.43966399395253,0.246242116153576,1.42800483870977,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,0,1.45990461090791,0.0945348171640679,5.76496433402666,3.33772185633879,0.196468613246569,0,0,0,0.174129737299267,1.59549552622638,0,0,0,0,0,0.694281003215189,1.13061588384802,0.838998872419812,4.67700671298115,0.626984899610432,0.258416759169329,0.71153252537342,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,4.0507097394088,0.892997282840798,0.22452937262617,0.675668882899933,4.5994991239765,0.949265659568129,1.09921046358244,0,0,0,0,0.379891534993739,0,0.286836620748814,0,1.12135520028461,0,3.7000132262574,0,0.134710672069688,0,0,0,0,0,1.1409436430889,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0.494533858557114,0,2.87447256726495,0,0.125118519871964,0,0,0.30648779579902,0.600952235626387,0.113432183160021,0,0,0.423863802319124,0,0,0,0,0,0.292311015483596,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0.71181185733329,0.269662616320329,0,0.769494313892781,2.21446636387394,2.80483547606892,0,0,7.60530208930985,1.96565443335525,0.590789906681404,0,0,1.88724591328378,0,0,0,0,0,0,5.77325368101093,0.115930404975077,0.117408694235822,0.721832238805369,1.38895653772983,3.04406643575357,0,0,0,0,0.297262324577456,0.93733833986777,0.335964256397719,0.425325291727159,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.22001485746285,0.258543431515556,0,0.845302752556,3.72313363218819,1.04007436911366,0,0,0,1.00084595560703,2.71310802695722,0.823240336780769,0,1.42156779497018,3.16780749173372,0,0,0,0,0,2.10833939483032,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50051156317903,0,1.24782516918484,7.49401752948079,0.473107245101804,0.585707074963566,0,0,1.03473071292505,0.664225598535437,0.184369168541703,0.260650843404249,0,0,0,0,0,1.5156378572313,9.98612637062982,9.97887967987945,0.496215615637554,0.153461973288062,1.12264037773229,0.384417447767103,0,0.321707842287215,0,0.925258162815933,0.355123450626254,0.0821271560138091,1.03850885836724,0.232420756919918,0.120859449591622,1.20303882181971,0,0.574072240823034,0.728364672026868,1.44236856455367,0.451199612907412,0.308061348417659,0,1.46139224653261,0.211103257785751,4.54933536283586,1.70093705276516,1.94324324491925,1.54227252690289,0,1.00337954770971,0,3.3243040357149,0.223874754722178,0.219259876645935,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0,3.253918845081,1.25924938732256,0.6970372701606,0,0.532306030317022,0,1.48259375283136,0.429374660225974,0,0,0.38126038784765,0.511795582622668,0.42793898803392,0,0,0.539617372749944,1.37268514868027,0.706874414074119,0.404364963146632,12.6808256938407,2.10629228119491,0.48763373908959,1.21856744815642,5.28250733783777,0.9554993798559,1.55545975149084,0,0,9.28814565337708,5.69986150829892,0,0.655894752046633,0.202910376962704,1.8589409885985,3.09865162785466,0.430234056612155,0.687743287091848,1.07001315444375,0.354761064070598,0,0,0.75894634753143,0,0,0.670302275535787,0,0.847294206991012,0.86101074534246,1.68471475667626,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,1.13654458722565,0.23874448473769,0,0.614321404198464,0,0.140669416410513,0.890469640183247,0,0,0.597743964753209,0,0,0,0,0,1.07842021376792,0.179021174675609,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.615602068030377,0.227884111694002,0,0,0,2.87101043758728,1.09917112082235,10.6606955203727,0,0,0.498635045700469,0.225595660617181,0.19606253431774,0,0.189753732724185,0,0.632994193584081,0.163232808159148,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0.126373159256976,0,0,0,1.323967823502,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0,0,0.34945333648406,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0.290967049465258,0,1.12990370390266,0.411125773940253,0.19871461170299,0,0,0.320635281006135,0.85381197895741,0.19980960958213,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,0.458320848023367,1.43574604915363,2.59582700648688,5.15071257763885,0.446342914883745,0.268733889946905,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,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| |||
|short_description=p@chr20:36768004..36768016,- | |||
}} |
Latest revision as of 13:51, 28 July 2015
Short description: | p@chr20:36768004..36768016, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36768004..36768016, - |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.68e-15 | 19 |
vascular associated smooth muscle cell | 3.27e-12 | 32 |
smooth muscle cell | 1.12e-10 | 43 |
smooth muscle myoblast | 1.12e-10 | 43 |
mesodermal cell | 5.52e-10 | 121 |
placental epithelial cell | 5.31e-08 | 3 |
smooth muscle cell of the subclavian artery | 6.36e-08 | 5 |
glomerular cell | 1.46e-07 | 7 |
kidney corpuscule cell | 1.46e-07 | 7 |
chorionic membrane mesenchymal stem cell | 1.71e-07 | 3 |
endothelial cell | 1.72e-07 | 36 |
glomerular endothelial cell | 1.90e-07 | 5 |
muscle cell | 1.99e-07 | 55 |
muscle precursor cell | 7.77e-07 | 58 |
myoblast | 7.77e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.77e-07 | 58 |