FFCP PHASE1:Hg19::chr1:22211127..22211133,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:22211127..22211133,+ | |||
|coexpression_cluster_id=C547 | |||
|description=CAGE_peak_at_chr1:22211127..22211133,+ | |description=CAGE_peak_at_chr1:22211127..22211133,+ | ||
|id=chr1:22211127..22211133,+ | |id=chr1:22211127..22211133,+ | ||
|ontology_enrichment_celltype=CL:0000222!2.60e-16!119;CL:0002078!1.70e-14!44;CL:0000115!5.19e-13!35;CL:0002139!2.08e-12!24;CL:0000213!6.52e-12!57;CL:0000215!6.52e-12!57;CL:0000055!1.49e-11!180;CL:0000057!5.07e-11!75;CL:0002321!1.89e-10!248;CL:0000220!3.09e-10!246;CL:0000071!1.87e-08!18;CL:0002546!1.87e-08!18;CL:0000183!4.67e-07!59 | |ontology_enrichment_celltype=CL:0000222!2.60e-16!119;CL:0002078!1.70e-14!44;CL:0000115!5.19e-13!35;CL:0002139!2.08e-12!24;CL:0000213!6.52e-12!57;CL:0000215!6.52e-12!57;CL:0000055!1.49e-11!180;CL:0000057!5.07e-11!75;CL:0002321!1.89e-10!248;CL:0000220!3.09e-10!246;CL:0000071!1.87e-08!18;CL:0002546!1.87e-08!18;CL:0000183!4.67e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.90e-27;24!CL:0000115;1.19e-25;36!CL:0002078;1.18e-18;45!CL:0000071;1.92e-16;18!CL:0002138;9.04e-13;6!CL:0000213;1.40e-12;58!CL:0000215;1.40e-12;58!CL:0002543;2.34e-09;6!CL:1000746;1.21e-07;7!CL:1000612;1.21e-07;7!CL:0002188;1.97e-07;5!CL:0002618;3.83e-07;3!CL:0002334;5.10e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.96e-30,36;CL:0002078,3.81e-29,45;CL:0002139,2.37e-26,24;CL:0000213,3.46e-24,58;CL:0000215,3.46e-24,58;CL:0000071,3.02e-16,18;CL:0002546,3.02e-16,18;CL:0000222,3.42e-16,121;CL:0005020,1.47e-12,6;CL:0002138,1.47e-12,6;CL:0005022,1.47e-12,6;CL:0002543,3.61e-09,6;CL:0000057,3.19e-08,76;CL:1000746,1.84e-07,7;CL:1000612,1.84e-07,7;CL:0002188,1.99e-07,5;CL:0002334,2.41e-07,12;CL:0002618,5.77e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.92e-16;18!CL:0005022;9.04e-13;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.36e-22!118;UBERON:0004872!2.75e-19!84;UBERON:0000055!8.77e-17!69;UBERON:0002049!6.01e-16!79;UBERON:0007798!6.01e-16!79;UBERON:0001009!1.13e-14!113;UBERON:0004535!2.67e-14!110;UBERON:0001981!5.38e-14!60;UBERON:0007500!5.38e-14!60;UBERON:0004537!5.38e-14!60;UBERON:0006965!5.38e-14!60;UBERON:0000490!6.92e-12!138;UBERON:0005256!9.92e-12!143;UBERON:0006914!2.91e-10!25;UBERON:0000487!9.24e-10!22;UBERON:0002100!3.91e-09!216;UBERON:0001986!1.87e-08!18;UBERON:0004638!1.87e-08!18;UBERON:0004852!1.87e-08!18;UBERON:0000926!2.18e-08!448;UBERON:0004120!2.18e-08!448;UBERON:0006603!2.18e-08!448;UBERON:0000468!8.56e-08!659;UBERON:0001637!1.10e-07!42;UBERON:0003509!1.10e-07!42;UBERON:0004572!1.10e-07!42;UBERON:0000477!1.17e-07!286;UBERON:0004111!3.28e-07!241;UBERON:0007100!4.67e-07!27;UBERON:0000353!5.81e-07!17;UBERON:0000483!7.10e-07!309;UBERON:0003104!8.20e-07!238;UBERON:0009142!8.20e-07!238;UBERON:0002385!8.44e-07!63;UBERON:0001015!8.44e-07!63;UBERON:0000383!8.44e-07!63;UBERON:0000948!8.45e-07!24;UBERON:0005498!8.45e-07!24;UBERON:0004140!8.45e-07!24;UBERON:0009881!8.45e-07!24;UBERON:0004141!8.45e-07!24;UBERON:0003084!8.45e-07!24;UBERON:0007005!8.45e-07!24;UBERON:0004139!8.45e-07!24;UBERON:0004291!8.45e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;4.20e-17;25!UBERON:0004638;1.92e-16;18!UBERON:0001986;1.92e-16;18!UBERON:0004852;1.92e-16;18!UBERON:0000487;5.53e-15;22!UBERON:0000055;7.86e-14;65!UBERON:0002049;1.36e-11;75!UBERON:0007798;1.36e-11;75!UBERON:0003914;1.36e-10;74!UBERON:0007500;2.93e-10;56!UBERON:0001981;2.93e-10;56!UBERON:0004537;2.93e-10;56!UBERON:0001637;1.02e-09;42!UBERON:0003509;1.02e-09;42!UBERON:0004572;1.02e-09;42!UBERON:0004573;1.96e-09;33!UBERON:0004571;1.96e-09;33!UBERON:0001473;2.33e-09;8!UBERON:0004536;2.33e-09;8!UBERON:0006558;2.33e-09;8!UBERON:0000947;8.62e-09;21!UBERON:0010191;8.62e-09;21!UBERON:0000353;4.35e-08;15!UBERON:0000490;5.96e-08;33!UBERON:0003513;8.59e-08;7!UBERON:0000074;1.21e-07;7!UBERON:0001229;1.21e-07;7!UBERON:0004457;1.89e-07;9!UBERON:0000042;1.89e-07;9!UBERON:0002465;2.58e-07;10!UBERON:0000025;3.33e-07;93!UBERON:0004535;4.78e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.32e-24,68;UBERON:0002049,3.26e-20,78;UBERON:0007798,3.26e-20,78;UBERON:0003914,1.05e-19,117;UBERON:0004872,1.92e-19,83;UBERON:0001009,1.16e-18,112;UBERON:0007500,1.55e-18,59;UBERON:0001981,1.55e-18,59;UBERON:0004537,1.55e-18,59;UBERON:0006965,1.55e-18,59;UBERON:0004535,3.09e-18,109;UBERON:0006914,3.91e-17,25;UBERON:0004638,3.02e-16,18;UBERON:0001986,3.02e-16,18;UBERON:0004852,3.02e-16,18;UBERON:0000487,6.76e-15,22;UBERON:0001637,6.66e-11,42;UBERON:0003509,6.66e-11,42;UBERON:0004572,6.66e-11,42;UBERON:0004573,1.29e-09,33;UBERON:0004571,1.29e-09,33;UBERON:0001473,3.31e-09,8;UBERON:0004536,3.31e-09,8;UBERON:0006558,3.31e-09,8;UBERON:0000947,7.14e-09,21;UBERON:0010191,7.14e-09,21;UBERON:0004111,2.64e-08,240;UBERON:0000353,5.41e-08,15;UBERON:0000926,8.03e-08,315;UBERON:0004120,8.03e-08,315;UBERON:0006603,8.03e-08,315;UBERON:0000025,1.04e-07,192;UBERON:0003513,1.33e-07,7;UBERON:0010532,1.84e-07,7;UBERON:0000074,1.84e-07,7;UBERON:0001229,1.84e-07,7;UBERON:0001230,1.84e-07,7;UBERON:0003220,1.84e-07,7;UBERON:0005749,1.84e-07,7;UBERON:0004199,1.84e-07,7;UBERON:0004209,1.84e-07,7;UBERON:0004198,1.84e-07,7;UBERON:0002465,3.38e-07,10 | |||
|phase1_expression=0.726713517082227,2.35510576280081,1.26858963686374,0,0.893922188854576,0,0,2.52687949370732,2.08948502559871,0.737201809504527,2.79120467188971,0.655324116390517,1.31883489114227,0.247532705920093,0,1.34465029290355,0.602694528023977,0,0.975865597581014,0.369363174230364,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,1.0843174571537,0,2.02785126545153,0,0,0.0945348171640679,0,0.263504357079378,0.392937226493138,0,0.741568885568859,0,0,0,0,0,0,0,0,4.51282652089873,0,15.1019797035566,7.15306909044175,0.208994966536811,3.6178346283706,2.49036383880697,1.00416183829401,6.44526907374635,0.760272105718513,9.51842024437861,2.20597848207521,13.7724131139899,2.76829157680647,2.2452937262617,1.12611480483322,3.06633274931766,0.949265659568129,3.11442964681692,0,0,0,3.97577561356255,0.12663051166458,1.72131935057184,3.72887606973458,3.19201543978521,1.12135520028461,1.06748995729705,0.49333509683432,0,2.82892411346345,1.9615428373615,0,0.576175924479999,0,0.936480230490962,0,0.298897361103602,0,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0.741800787835671,0,0.718618141816238,0.168336113954066,0,0,0.438977620880838,0.612975591598039,0.901428353439581,0.907457465280168,1.25572744982203,0.640672166455702,0.423863802319124,2.10063767259082,0.412210116953756,1.28820270022815,0.558350568994769,1.85653965465393,0.194874010322397,1.51460264546469,0.368199594569197,0.161646056818812,2.4850671476163,0.403008392910561,0.67824236924195,0,0.818238361772504,0,0.243947412259191,0.132529768321485,0,0.414644220061482,0.252320850875628,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0,0.435758888184812,0.237270619111097,0,0.392442930250692,0,2.95262181849859,7.01208869017229,0.8231480226628,0,0,0,0,0,0,0,0.878002283269004,0,0,0.555530670951178,0,0,0,0,0.234817388471643,1.58803092537181,2.31492756288305,2.09279567458058,0,0,0,0.234004265139238,0,0,0.16798212819886,0.283550194484773,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0.129271715757778,14.3062578340753,0,0.531876233169741,0,0.514414748524284,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,1.09970290300263,0,0,0,0.718874566474748,1.14861935834114,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,3.53550464602372,1.42743191037729,1.26161932027148,1.40569697991256,0,0,0,0,0.184369168541703,0.260650843404249,0.587403472388222,0.343143423810856,0,0,0,0.606255142892519,0,0.30239029332968,0.248107807818777,1.38115775959256,1.96462066103151,1.28139149255701,1.53512174720011,1.60853921143608,1.48418066444991,0,0.710246901252508,0.164254312027618,1.55776328755086,0.581051892299796,0.241718899183244,0.601519410909855,0.184161977871793,0.114814448164607,0.364182336013434,0.262248829918848,1.35359883872224,0.616122696835318,2.35304930753057,0,0.316654886678627,1.13733384070897,2.89159298970077,0.431831832204279,7.71136263451447,0.812839312631559,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0.15350367472613,0.413509717453592,0.214840489736547,0.580066775656914,0.170453254832202,1.06838442776085,0,0,0.127612712494584,0.30347334256665,0,2.20368642781448,0,2.7723022215848,0.532306030317022,0,0.37064843820784,0,0.372158369359667,0,0.38126038784765,1.02359116524534,0,0,0,0,0.274537029736055,0.235624804691373,0.606547444719948,0,1.26377536871694,0.48763373908959,1.21856744815642,1.05650146756755,0.272999822815972,0,2.26016233240486,0.551365343546124,7.29782872765342,0,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0.392996164052485,0.35667105148125,0.354761064070598,2.53329162357197,1.64647446479951,0,0.349934720244983,0,0,0,0,0,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0.284136146806413,0.47748896947538,0,0.307160702099232,0,0,0,0,0.63337622438398,2.78947183551498,0,0,0.306806047506464,0,0.311039587661807,0.179736702294654,0.179021174675609,0,0.394573622547734,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.230850775511391,0.113942055847001,0.23056390438806,0.179515288819544,0.217294743844016,1.27600463892768,0.457987967009312,0,0,0.156980256395025,0.498635045700469,0,0,0.167821586975843,0,0.158936578980379,0.421996129056054,0.652931232636591,0.141353071433941,0,4.97630965539252,0.0884575645033392,0,0,0,0,0,1.60515529459758,0,0,0.19566461893209,0,0.78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| ||
|short_description=p@chr1:22211127..22211133,+ | |short_description=p@chr1:22211127..22211133,+ | ||
}} | }} |
Latest revision as of 04:12, 28 July 2015
Short description: | p@chr1:22211127..22211133, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22211127..22211133, + |
Coexpression cluster: | C547_Renal_Endothelial_Mesenchymal_Hepatic_Smooth_Fibroblast_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.96e-30 | 36 |
meso-epithelial cell | 3.81e-29 | 45 |
endothelial cell of vascular tree | 2.37e-26 | 24 |
lining cell | 3.46e-24 | 58 |
barrier cell | 3.46e-24 | 58 |
blood vessel endothelial cell | 3.02e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.02e-16 | 18 |
mesodermal cell | 3.42e-16 | 121 |
lymphangioblast | 1.47e-12 | 6 |
endothelial cell of lymphatic vessel | 1.47e-12 | 6 |
vascular lymphangioblast | 1.47e-12 | 6 |
vein endothelial cell | 3.61e-09 | 6 |
fibroblast | 3.19e-08 | 76 |
glomerular cell | 1.84e-07 | 7 |
kidney corpuscule cell | 1.84e-07 | 7 |
glomerular endothelial cell | 1.99e-07 | 5 |
preadipocyte | 2.41e-07 | 12 |
endothelial cell of umbilical vein | 5.77e-07 | 3 |