FFCP PHASE1:Hg19::chr1:1098315..1098328,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:1098315..1098328,+ | |||
|coexpression_cluster_id=C3845 | |coexpression_cluster_id=C3845 | ||
|description=CAGE_peak_at_chr1:1098315..1098328,+ | |description=CAGE_peak_at_chr1:1098315..1098328,+ | ||
|id=chr1:1098315..1098328,+ | |id=chr1:1098315..1098328,+ | ||
|ontology_enrichment_celltype=CL:0002076!9.80e-21!43;CL:0000066!2.19e-18!254;CL:0000223!8.35e-15!59;CL:0002251!8.28e-10!21;CL:0002368!1.38e-08!13 | |ontology_enrichment_celltype=CL:0002076!9.80e-21!43;CL:0000066!2.19e-18!254;CL:0000223!8.35e-15!59;CL:0002251!8.28e-10!21;CL:0002368!1.38e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.35e-07;42!CL:0002535;6.88e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.63e-09,42;CL:0000066,4.50e-08,253;CL:0002535,7.44e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.64e-07;2!UBERON:0006595;3.21e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.20e-18!106;DOID:1749!1.13e-13!14;DOID:0050687!5.63e-12!143;DOID:299!2.09e-10!25 | |ontology_enrichment_disease=DOID:305!2.20e-18!106;DOID:1749!1.13e-13!14;DOID:0050687!5.63e-12!143;DOID:299!2.09e-10!25 | ||
|ontology_enrichment_disease_v019=DOID:299;5.73e-15;25!DOID:3493;4.79e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,6.96e-15,25;DOID:305,2.21e-12,106;DOID:0050687,2.25e-08,143;DOID:3493,7.01e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.47e-27!169;UBERON:0000925!9.47e-27!169;UBERON:0006595!9.47e-27!169;UBERON:0001007!6.47e-24!155;UBERON:0001555!6.47e-24!155;UBERON:0007026!6.47e-24!155;UBERON:0004921!3.21e-19!129;UBERON:0004185!3.21e-19!129;UBERON:0000464!1.52e-15!104;UBERON:0000077!4.74e-15!130;UBERON:0001004!1.00e-13!72;UBERON:0000466!1.52e-13!126;UBERON:0005911!2.48e-12!82;UBERON:0000161!4.13e-12!35;UBERON:0001008!2.56e-10!45;UBERON:0000344!2.65e-10!12;UBERON:0003064!5.61e-10!37;UBERON:0005153!5.84e-10!37;UBERON:0005178!6.74e-10!34;UBERON:0002224!6.74e-10!34;UBERON:0005156!7.05e-10!59;UBERON:0000990!7.05e-10!59;UBERON:0005177!1.33e-09!107;UBERON:0006554!1.60e-09!44;UBERON:0001046!1.76e-09!19;UBERON:0005181!1.82e-09!35;UBERON:0005409!3.29e-09!35;UBERON:0000065!3.86e-09!53;UBERON:0000058!4.07e-09!26;UBERON:0000160!1.26e-08!27;UBERON:0004175!1.66e-08!25;UBERON:0001041!2.14e-08!98;UBERON:0000062!2.22e-08!511;UBERON:0000481!3.76e-08!347;UBERON:0002048!5.06e-08!22;UBERON:0000117!5.06e-08!22;UBERON:0000171!5.06e-08!22;UBERON:0000170!5.06e-08!22;UBERON:0005597!5.06e-08!22;UBERON:0000118!5.06e-08!22;UBERON:0003104!1.25e-07!238;UBERON:0009142!1.25e-07!238;UBERON:0003133!1.61e-07!48;UBERON:0002553!1.71e-07!70;UBERON:0009569!1.72e-07!113;UBERON:0005157!2.01e-07!51;UBERON:0000915!2.66e-07!52;UBERON:0000166!2.80e-07!21;UBERON:0002294!3.87e-07!7;UBERON:0001173!3.87e-07!7;UBERON:0004912!3.87e-07!7;UBERON:0003729!4.90e-07!5 | |ontology_enrichment_uberon=UBERON:0004119!9.47e-27!169;UBERON:0000925!9.47e-27!169;UBERON:0006595!9.47e-27!169;UBERON:0001007!6.47e-24!155;UBERON:0001555!6.47e-24!155;UBERON:0007026!6.47e-24!155;UBERON:0004921!3.21e-19!129;UBERON:0004185!3.21e-19!129;UBERON:0000464!1.52e-15!104;UBERON:0000077!4.74e-15!130;UBERON:0001004!1.00e-13!72;UBERON:0000466!1.52e-13!126;UBERON:0005911!2.48e-12!82;UBERON:0000161!4.13e-12!35;UBERON:0001008!2.56e-10!45;UBERON:0000344!2.65e-10!12;UBERON:0003064!5.61e-10!37;UBERON:0005153!5.84e-10!37;UBERON:0005178!6.74e-10!34;UBERON:0002224!6.74e-10!34;UBERON:0005156!7.05e-10!59;UBERON:0000990!7.05e-10!59;UBERON:0005177!1.33e-09!107;UBERON:0006554!1.60e-09!44;UBERON:0001046!1.76e-09!19;UBERON:0005181!1.82e-09!35;UBERON:0005409!3.29e-09!35;UBERON:0000065!3.86e-09!53;UBERON:0000058!4.07e-09!26;UBERON:0000160!1.26e-08!27;UBERON:0004175!1.66e-08!25;UBERON:0001041!2.14e-08!98;UBERON:0000062!2.22e-08!511;UBERON:0000481!3.76e-08!347;UBERON:0002048!5.06e-08!22;UBERON:0000117!5.06e-08!22;UBERON:0000171!5.06e-08!22;UBERON:0000170!5.06e-08!22;UBERON:0005597!5.06e-08!22;UBERON:0000118!5.06e-08!22;UBERON:0003104!1.25e-07!238;UBERON:0009142!1.25e-07!238;UBERON:0003133!1.61e-07!48;UBERON:0002553!1.71e-07!70;UBERON:0009569!1.72e-07!113;UBERON:0005157!2.01e-07!51;UBERON:0000915!2.66e-07!52;UBERON:0000166!2.80e-07!21;UBERON:0002294!3.87e-07!7;UBERON:0001173!3.87e-07!7;UBERON:0004912!3.87e-07!7;UBERON:0003729!4.90e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.04e-17;33!UBERON:0005409;1.19e-16;22!UBERON:0000160;2.93e-12;17!UBERON:0006947;1.19e-10;3!UBERON:0004054;1.19e-10;3!UBERON:0004175;1.60e-10;21!UBERON:0005904;4.52e-08;4!UBERON:0001555;6.92e-08;54!UBERON:0000058;1.44e-07;10!UBERON:0001041;1.82e-07;14!UBERON:0000007;4.79e-07;2!UBERON:0000059;5.04e-07;11!UBERON:0006955;6.88e-07;2!UBERON:0004801;6.88e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.01e-14,25;UBERON:0001007,6.25e-14,145;UBERON:0001555,6.25e-14,145;UBERON:0007026,6.25e-14,145;UBERON:0004119,7.94e-13,160;UBERON:0000925,7.94e-13,160;UBERON:0006595,7.94e-13,160;UBERON:0004921,1.48e-12,118;UBERON:0000160,2.57e-12,17;UBERON:0006947,1.51e-10,3;UBERON:0004054,1.51e-10,3;UBERON:0004175,1.57e-08,25;UBERON:0005904,5.40e-08,4;UBERON:0000059,4.65e-07,11;UBERON:0000007,5.67e-07,2;UBERON:0006955,7.44e-07,2;UBERON:0004801,7.44e-07,2;UBERON:0005177,7.92e-07,101 | |||
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|short_description=p@chr1:1098315..1098328,+ | |short_description=p@chr1:1098315..1098328,+ | ||
}} | }} |
Latest revision as of 19:20, 27 July 2015
Short description: | p@chr1:1098315..1098328, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:1098315..1098328, + |
Coexpression cluster: | C3845_ductus_seminal_smallcell_colon_epididymis_salivary_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.63e-09 | 42 |
epithelial cell | 4.50e-08 | 253 |
epithelial cell of cervix | 7.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.01e-14 | 25 |
digestive system | 6.25e-14 | 145 |
digestive tract | 6.25e-14 | 145 |
primitive gut | 6.25e-14 | 145 |
endoderm-derived structure | 7.94e-13 | 160 |
endoderm | 7.94e-13 | 160 |
presumptive endoderm | 7.94e-13 | 160 |
subdivision of digestive tract | 1.48e-12 | 118 |
intestine | 2.57e-12 | 17 |
male genital duct | 1.51e-10 | 3 |
internal male genitalia | 1.51e-10 | 3 |
internal genitalia | 1.57e-08 | 25 |
duct of male reproductive system | 5.40e-08 | 4 |
large intestine | 4.65e-07 | 11 |
pituitary gland | 5.67e-07 | 2 |
uterine epithelium | 7.44e-07 | 2 |
cervix epithelium | 7.44e-07 | 2 |
trunk region element | 7.92e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 6.96e-15 | 25 |
carcinoma | 2.21e-12 | 106 |
cell type cancer | 2.25e-08 | 143 |
signet ring cell adenocarcinoma | 7.01e-07 | 2 |