FFCP PHASE1:Hg19::chr19:7420475..7420497,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:7420475..7420497,+ | |||
|description=CAGE_peak_at_chr19:7420475..7420497,+ | |description=CAGE_peak_at_chr19:7420475..7420497,+ | ||
|id=chr19:7420475..7420497,+ | |id=chr19:7420475..7420497,+ | ||
|ontology_enrichment_celltype=CL:0000680!1.64e-10!57;CL:0000056!1.64e-10!57;CL:0000355!1.64e-10!57;CL:0000187!2.59e-10!54;CL:0000183!5.98e-10!59;CL:0000393!9.97e-09!60;CL:0000211!9.97e-09!60;CL:0000055!1.83e-07!180;CL:0000153!3.78e-07!9;CL:0000447!3.78e-07!9;CL:0000135!5.92e-07!3;CL:0000386!5.92e-07!3;CL:0000388!5.92e-07!3 | |ontology_enrichment_celltype=CL:0000680!1.64e-10!57;CL:0000056!1.64e-10!57;CL:0000355!1.64e-10!57;CL:0000187!2.59e-10!54;CL:0000183!5.98e-10!59;CL:0000393!9.97e-09!60;CL:0000211!9.97e-09!60;CL:0000055!1.83e-07!180;CL:0000153!3.78e-07!9;CL:0000447!3.78e-07!9;CL:0000135!5.92e-07!3;CL:0000386!5.92e-07!3;CL:0000388!5.92e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.19e-13;3!CL:0000388;1.19e-13;3!CL:0002195;8.03e-10;2!CL:0002571;8.03e-10;2!CL:0002600;2.25e-09;2!CL:0000214;7.16e-07;3 | |ontology_enrichment_celltype_v019=CL:0000135;1.19e-13;3!CL:0000388;1.19e-13;3!CL:0002195;8.03e-10;2!CL:0002571;8.03e-10;2!CL:0002600;2.25e-09;2!CL:0000214;7.16e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.48e-13,3;CL:0000388,1.48e-13,3;CL:0002195,8.22e-10,2;CL:0002571,8.22e-10,2;CL:0002600,2.68e-09,2;CL:0000214,7.60e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.57e-07;10 | |ontology_enrichment_development_v019=UBERON:0005795;1.57e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;6.56e-07;3!DOID:127;6.56e-07;3 | |ontology_enrichment_disease_v019=DOID:0060084;6.56e-07;3!DOID:127;6.56e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.38e-07,3;DOID:127,7.38e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002385!2.48e-11!63;UBERON:0001015!2.48e-11!63;UBERON:0000383!2.48e-11!63;UBERON:0000059!4.66e-11!11;UBERON:0001155!1.36e-10!9;UBERON:0001134!1.93e-09!61;UBERON:0002036!1.93e-09!61;UBERON:0003082!1.93e-09!61;UBERON:0004290!1.66e-07!70;UBERON:0001135!3.28e-07!15;UBERON:0000486!3.31e-07!82;UBERON:0000043!5.92e-07!3;UBERON:0000914!6.35e-07!83;UBERON:0002329!6.35e-07!83;UBERON:0003077!6.35e-07!83;UBERON:0003059!6.35e-07!83;UBERON:0007282!6.35e-07!83;UBERON:0009618!6.35e-07!83;UBERON:0007285!6.35e-07!83;UBERON:0000160!8.83e-07!27 | |ontology_enrichment_uberon=UBERON:0002385!2.48e-11!63;UBERON:0001015!2.48e-11!63;UBERON:0000383!2.48e-11!63;UBERON:0000059!4.66e-11!11;UBERON:0001155!1.36e-10!9;UBERON:0001134!1.93e-09!61;UBERON:0002036!1.93e-09!61;UBERON:0003082!1.93e-09!61;UBERON:0004290!1.66e-07!70;UBERON:0001135!3.28e-07!15;UBERON:0000486!3.31e-07!82;UBERON:0000043!5.92e-07!3;UBERON:0000914!6.35e-07!83;UBERON:0002329!6.35e-07!83;UBERON:0003077!6.35e-07!83;UBERON:0003059!6.35e-07!83;UBERON:0007282!6.35e-07!83;UBERON:0009618!6.35e-07!83;UBERON:0007285!6.35e-07!83;UBERON:0000160!8.83e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.98e-19;17!UBERON:0005409;7.16e-18;22!UBERON:0000059;3.54e-14;11!UBERON:0007846;1.19e-13;3!UBERON:0000043;1.19e-13;3!UBERON:0007845;1.19e-13;3!UBERON:0004921;6.35e-13;33!UBERON:0001155;2.53e-12;9!UBERON:0002108;4.66e-09;4!UBERON:0002110;6.27e-07;3!UBERON:0006915;7.16e-07;3!UBERON:0007616;7.16e-07;3!UBERON:0002217;7.16e-07;3!UBERON:0002018;7.16e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000160;5.98e-19;17!UBERON:0005409;7.16e-18;22!UBERON:0000059;3.54e-14;11!UBERON:0007846;1.19e-13;3!UBERON:0000043;1.19e-13;3!UBERON:0007845;1.19e-13;3!UBERON:0004921;6.35e-13;33!UBERON:0001155;2.53e-12;9!UBERON:0002108;4.66e-09;4!UBERON:0002110;6.27e-07;3!UBERON:0006915;7.16e-07;3!UBERON:0007616;7.16e-07;3!UBERON:0002217;7.16e-07;3!UBERON:0002018;7.16e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.53e-19,17;UBERON:0005409,1.17e-15,25;UBERON:0000059,2.52e-14,11;UBERON:0007846,1.48e-13,3;UBERON:0000043,1.48e-13,3;UBERON:0007845,1.48e-13,3;UBERON:0001155,1.92e-12,9;UBERON:0002108,4.86e-09,4;UBERON:0004921,5.71e-07,118;UBERON:0002110,7.38e-07,3;UBERON:0006242,7.38e-07,3;UBERON:0006915,7.60e-07,3;UBERON:0007616,7.60e-07,3;UBERON:0002217,7.60e-07,3;UBERON:0002018,7.60e-07,3 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85372853138506,1.43418310374407,0,0,0,0,1.24484414159907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8810180793198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28680194292333,11.9376753186117,0,0,3.19852753868291,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492762936082855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.214840489736547,0.290033387828457,0,0.0890320356467374,0,0,0,0,0.464845549297286,0.62962469366128,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,1.27281299170375,0,0.539617372749944,1.64722217841633,0.471249609382746,0,0,0,0.48763373908959,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0,1.15755106853338,1.31178950409327,0,0,0,0,0,0,0.354761064070598,1.26664581178598,4.28083360847872,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,2.95930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23191085715948,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9384051040206,5.83819925722038,2.4441205797345,0,0,0,0.202203398942031,0,0,0,0,0,0,4.83962864194656,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,1.22308667769421,1.20390222730132,0,0,0,1.45483524732629,0,0,0,0,0,0,1.20238230377301,8.5381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,2.17199840701485,0,2.28611152076586,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0.568209015825267,2.0125432140206,2.66943366478961,0,1.05861646634267,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,1.71697852591396,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.920529751259204,0,0,0,0,0,0,0.33946505990805,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,2.0170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78493092850514,0,0,2.73947616152849,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,4.70762364458462,3.0598338470554,0,4.16752146981639,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,2.19100916473955,0,0,0,0,0,6.34832208618481,1.11598505450025,3.23522940041993,1.29787968637137,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.224263725161227,0,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,12.7131101950181,3.25516942652591,0,0,0 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|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85372853138506,1.43418310374407,0,0,0,0,1.24484414159907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8810180793198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28680194292333,11.9376753186117,0,0,3.19852753868291,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492762936082855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.214840489736547,0.290033387828457,0,0.0890320356467374,0,0,0,0,0.464845549297286,0.62962469366128,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,1.27281299170375,0,0.539617372749944,1.64722217841633,0.471249609382746,0,0,0,0.48763373908959,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0,1.15755106853338,1.31178950409327,0,0,0,0,0,0,0.354761064070598,1.26664581178598,4.28083360847872,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,2.95930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23191085715948,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9384051040206,5.83819925722038,2.4441205797345,0,0,0,0.202203398942031,0,0,0,0,0,0,4.83962864194656,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,1.22308667769421,1.20390222730132,0,0,0,1.45483524732629,0,0,0,0,0,0,1.20238230377301,8.5381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,2.17199840701485,0,2.28611152076586,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0.568209015825267,2.0125432140206,2.66943366478961,0,1.05861646634267,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,1.71697852591396,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.920529751259204,0,0,0,0,0,0,0.33946505990805,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,2.0170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78493092850514,0,0,2.73947616152849,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,4.70762364458462,3.0598338470554,0,4.16752146981639,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,2.19100916473955,0,0,0,0,0,6.34832208618481,1.11598505450025,3.23522940041993,1.29787968637137,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.224263725161227,0,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,12.7131101950181,3.25516942652591,0,0,0 | ||
|short_description=p@chr19:7420475..7420497,+ | |short_description=p@chr19:7420475..7420497,+ | ||
}} | }} |
Latest revision as of 18:25, 27 July 2015
Short description: | p@chr19:7420475..7420497, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:7420475..7420497, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.48e-13 | 3 |
tendon cell | 1.48e-13 | 3 |
hepatic stem cell | 8.22e-10 | 2 |
hepatic mesenchymal stem cell | 8.22e-10 | 2 |
smooth muscle cell of trachea | 2.68e-09 | 2 |
synovial cell | 7.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.53e-19 | 17 |
gastrointestinal system | 1.17e-15 | 25 |
large intestine | 2.52e-14 | 11 |
dense regular connective tissue | 1.48e-13 | 3 |
tendon | 1.48e-13 | 3 |
regular connective tissue | 1.48e-13 | 3 |
colon | 1.92e-12 | 9 |
small intestine | 4.86e-09 | 4 |
subdivision of digestive tract | 5.71e-07 | 118 |
gallbladder | 7.38e-07 | 3 |
gall bladder primordium | 7.38e-07 | 3 |
stratified squamous epithelium | 7.60e-07 | 3 |
layer of synovial tissue | 7.60e-07 | 3 |
synovial joint | 7.60e-07 | 3 |
synovial membrane of synovial joint | 7.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.38e-07 | 3 |
leiomyoma | 7.38e-07 | 3 |