FFCP PHASE1:Hg19::chr19:44303927..44303960,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:44303927..44303960,- | |||
|description=CAGE_peak_at_chr19:44303927..44303960,- | |description=CAGE_peak_at_chr19:44303927..44303960,- | ||
|id=chr19:44303927..44303960,- | |id=chr19:44303927..44303960,- | ||
|ontology_enrichment_celltype=CL:0000066!1.17e-19!254;CL:0002076!7.27e-14!43;CL:0000076!6.08e-11!62;CL:0000223!4.48e-10!59;CL:0002159!5.80e-09!13;CL:0002251!6.66e-09!21;CL:0000039!1.36e-07!7;CL:0000586!1.36e-07!7;CL:0002322!4.30e-07!5 | |ontology_enrichment_celltype=CL:0000066!1.17e-19!254;CL:0002076!7.27e-14!43;CL:0000076!6.08e-11!62;CL:0000223!4.48e-10!59;CL:0002159!5.80e-09!13;CL:0002251!6.66e-09!21;CL:0000039!1.36e-07!7;CL:0000586!1.36e-07!7;CL:0002322!4.30e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.86e-13;19!CL:0002322;1.67e-12;5!CL:0000039;3.59e-10;7!CL:0000586;3.59e-10;7!CL:0000244;3.84e-10;4!CL:0000731;3.84e-10;4!CL:0002577;4.09e-09;3!CL:0002621;6.58e-09;3!CL:0002159;8.64e-09;14!CL:0000622;1.22e-08;5!CL:0000362;2.19e-07;9!CL:0000154;3.38e-07;6!CL:0002077;7.68e-07;34!CL:0000575;8.34e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.05e-15,253;CL:0000349,3.06e-13,19;CL:0002322,2.79e-12,5;CL:0000244,2.20e-10,4;CL:0000731,2.20e-10,4;CL:0000039,4.00e-10,7;CL:0000586,4.00e-10,7;CL:0002577,3.58e-09,3;CL:0002159,6.92e-09,14;CL:0002621,8.30e-09,3;CL:0000622,1.29e-08,5;CL:0000076,2.12e-08,63;CL:0000362,1.68e-07,9;CL:0002077,2.56e-07,34;CL:0000154,3.54e-07,6;CL:0000575,8.60e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.38e-13!14;DOID:305!1.69e-10!106;DOID:0050687!2.50e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.20e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.85e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.47e-15!169;UBERON:0000925!5.47e-15!169;UBERON:0006595!5.47e-15!169;UBERON:0005631!4.15e-14!14;UBERON:0000158!4.15e-14!14;UBERON:0003124!1.15e-10!7;UBERON:0001007!2.77e-10!155;UBERON:0001555!2.77e-10!155;UBERON:0007026!2.77e-10!155;UBERON:0001004!9.39e-10!72;UBERON:0000077!5.85e-09!130;UBERON:0005157!1.41e-08!51;UBERON:0004807!2.43e-08!28;UBERON:0000161!3.60e-08!35;UBERON:0005153!4.33e-08!37;UBERON:0005911!6.77e-08!82;UBERON:0000065!1.14e-07!53;UBERON:0000072!3.07e-07!46;UBERON:0004921!3.54e-07!129;UBERON:0004185!3.54e-07!129;UBERON:0000166!4.24e-07!21;UBERON:0000974!4.36e-07!10;UBERON:0005178!4.91e-07!34;UBERON:0002224!4.91e-07!34;UBERON:0001987!7.02e-07!4;UBERON:0004340!7.02e-07!4;UBERON:0000365!7.90e-07!5 | |ontology_enrichment_uberon=UBERON:0004119!5.47e-15!169;UBERON:0000925!5.47e-15!169;UBERON:0006595!5.47e-15!169;UBERON:0005631!4.15e-14!14;UBERON:0000158!4.15e-14!14;UBERON:0003124!1.15e-10!7;UBERON:0001007!2.77e-10!155;UBERON:0001555!2.77e-10!155;UBERON:0007026!2.77e-10!155;UBERON:0001004!9.39e-10!72;UBERON:0000077!5.85e-09!130;UBERON:0005157!1.41e-08!51;UBERON:0004807!2.43e-08!28;UBERON:0000161!3.60e-08!35;UBERON:0005153!4.33e-08!37;UBERON:0005911!6.77e-08!82;UBERON:0000065!1.14e-07!53;UBERON:0000072!3.07e-07!46;UBERON:0004921!3.54e-07!129;UBERON:0004185!3.54e-07!129;UBERON:0000166!4.24e-07!21;UBERON:0000974!4.36e-07!10;UBERON:0005178!4.91e-07!34;UBERON:0002224!4.91e-07!34;UBERON:0001987!7.02e-07!4;UBERON:0004340!7.02e-07!4;UBERON:0000365!7.90e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.45e-13;10!UBERON:0000158;1.45e-13;10!UBERON:0000478;2.72e-12;24!UBERON:0001987;8.38e-12;4!UBERON:0000305;3.91e-10;7!UBERON:0000486;1.12e-09;12!UBERON:0001949;6.58e-09;3!UBERON:0004807;3.58e-08;22!UBERON:0005911;3.87e-08;36!UBERON:0000365;3.99e-08;5!UBERON:0000161;1.02e-07;19!UBERON:0000166;1.02e-07;19!UBERON:0000165;1.35e-07;28!UBERON:0005910;8.91e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.99e-23,14;UBERON:0000158,5.99e-23,14;UBERON:0003124,8.39e-15,7;UBERON:0000478,2.85e-12,24;UBERON:0001987,7.15e-12,4;UBERON:0004340,7.15e-12,4;UBERON:0000166,3.83e-10,22;UBERON:0000305,4.66e-10,7;UBERON:0004923,4.27e-09,66;UBERON:0001949,8.30e-09,3;UBERON:0004871,9.58e-09,8;UBERON:0000365,2.58e-08,5;UBERON:0001004,5.41e-08,74;UBERON:0003133,6.73e-08,48;UBERON:0000165,3.28e-07,29;UBERON:0000930,3.28e-07,29;UBERON:0000995,5.85e-07,21;UBERON:0005910,6.24e-07,6 | |||
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|short_description=p@chr19:44303927..44303960,- | |short_description=p@chr19:44303927..44303960,- | ||
}} | }} |
Latest revision as of 14:34, 27 July 2015
Short description: | p@chr19:44303927..44303960, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:44303927..44303960, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.05e-15 | 253 |
extraembryonic cell | 3.06e-13 | 19 |
embryonic stem cell | 2.79e-12 | 5 |
transitional epithelial cell | 2.20e-10 | 4 |
urothelial cell | 2.20e-10 | 4 |
germ line cell | 4.00e-10 | 7 |
germ cell | 4.00e-10 | 7 |
placental epithelial cell | 3.58e-09 | 3 |
general ecto-epithelial cell | 6.92e-09 | 14 |
gingival epithelial cell | 8.30e-09 | 3 |
acinar cell | 1.29e-08 | 5 |
squamous epithelial cell | 2.12e-08 | 63 |
epidermal cell | 1.68e-07 | 9 |
ecto-epithelial cell | 2.56e-07 | 34 |
protein secreting cell | 3.54e-07 | 6 |
corneal epithelial cell | 8.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.99e-23 | 14 |
membranous layer | 5.99e-23 | 14 |
chorion | 8.39e-15 | 7 |
extraembryonic structure | 2.85e-12 | 24 |
placenta | 7.15e-12 | 4 |
allantois | 7.15e-12 | 4 |
oral opening | 3.83e-10 | 22 |
amnion | 4.66e-10 | 7 |
organ component layer | 4.27e-09 | 66 |
gingival epithelium | 8.30e-09 | 3 |
somatic layer of lateral plate mesoderm | 9.58e-09 | 8 |
urothelium | 2.58e-08 | 5 |
respiratory system | 5.41e-08 | 74 |
reproductive organ | 6.73e-08 | 48 |
mouth | 3.28e-07 | 29 |
stomodeum | 3.28e-07 | 29 |
uterus | 5.85e-07 | 21 |
transitional epithelium | 6.24e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.85e-09 | 14 |