FFCP PHASE1:Hg19::chr19:36611230..36611239,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:36611230..36611239,+ | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_at_chr19:36611230..36611239,+ | |description=CAGE_peak_at_chr19:36611230..36611239,+ | ||
|id=chr19:36611230..36611239,+ | |id=chr19:36611230..36611239,+ | ||
|ontology_enrichment_celltype=CL:0000313!2.07e-13!1;CL:0000181!3.28e-10!12;CL:0000417!3.28e-10!12;CL:0000668!3.28e-10!12;CL:0000414!3.28e-10!12;CL:0000412!3.28e-10!12;CL:0000182!3.28e-10!12;CL:0002535!1.12e-07!2;CL:0000242!1.36e-07!2;CL:0000159!2.40e-07!2 | |ontology_enrichment_celltype=CL:0000313!2.07e-13!1;CL:0000181!3.28e-10!12;CL:0000417!3.28e-10!12;CL:0000668!3.28e-10!12;CL:0000414!3.28e-10!12;CL:0000412!3.28e-10!12;CL:0000182!3.28e-10!12;CL:0002535!1.12e-07!2;CL:0000242!1.36e-07!2;CL:0000159!2.40e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.41e-25;12!CL:0002535;1.07e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.41e-25,12;CL:0002535,9.07e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.12e-28;11!UBERON:0009497;1.10e-23;13!UBERON:0001041;9.89e-11;30!UBERON:0003104;3.38e-10;31 | |||
|ontology_enrichment_disease=DOID:0050619!1.25e-13!1;DOID:1357!1.25e-13!1;DOID:2152!2.07e-13!1;DOID:4362!4.12e-11!5;DOID:305!9.52e-07!106 | |ontology_enrichment_disease=DOID:0050619!1.25e-13!1;DOID:1357!1.25e-13!1;DOID:2152!2.07e-13!1;DOID:4362!4.12e-11!5;DOID:305!9.52e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:4362;4.06e-27;5!DOID:7;8.29e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.55e-27,5;DOID:7,2.02e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.25e-13!1;UBERON:0001825!1.25e-13!1;UBERON:0004911!2.07e-13!1;UBERON:0000002!2.07e-09!6;UBERON:0001560!2.07e-09!6;UBERON:0006955!1.12e-07!2;UBERON:0004801!1.12e-07!2;UBERON:0000007!1.28e-07!2;UBERON:0004909!2.40e-07!2 | |ontology_enrichment_uberon=UBERON:0001764!1.25e-13!1;UBERON:0001825!1.25e-13!1;UBERON:0004911!2.07e-13!1;UBERON:0000002!2.07e-09!6;UBERON:0001560!2.07e-09!6;UBERON:0006955!1.12e-07!2;UBERON:0004801!1.12e-07!2;UBERON:0000007!1.28e-07!2;UBERON:0004909!2.40e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;8.47e-23;6!UBERON:0001560;8.47e-23;6!UBERON:0000007;1.07e-17;2!UBERON:0006955;1.07e-17;2!UBERON:0004801;1.07e-17;2!UBERON:0002107;1.75e-16;19!UBERON:0006925;1.75e-16;19!UBERON:0002368;5.92e-16;33!UBERON:0002423;1.01e-12;25!UBERON:0000949;1.31e-10;43!UBERON:0002365;1.16e-09;31!UBERON:0002330;1.16e-09;31!UBERON:0003296;1.57e-09;4!UBERON:0010133;1.57e-09;4!UBERON:0000995;1.00e-08;17!UBERON:0003975;2.70e-08;18!UBERON:0004175;3.05e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,7.58e-23,6;UBERON:0001560,7.58e-23,6;UBERON:0006955,9.07e-18,2;UBERON:0004801,9.07e-18,2;UBERON:0000007,1.27e-17,2;UBERON:0002107,1.75e-16,19;UBERON:0006925,1.75e-16,19;UBERON:0008836,1.75e-16,19;UBERON:0002368,1.09e-15,35;UBERON:0008835,2.38e-14,22;UBERON:0003894,2.38e-14,22;UBERON:0009854,9.23e-14,23;UBERON:0007499,1.01e-12,25;UBERON:0009497,1.01e-12,25;UBERON:0000015,1.01e-12,25;UBERON:0002423,1.01e-12,25;UBERON:0006235,1.01e-12,25;UBERON:0004161,1.01e-12,25;UBERON:0000949,2.44e-12,45;UBERON:0009856,2.90e-12,26;UBERON:0002365,2.08e-10,31;UBERON:0002330,2.08e-10,31;UBERON:0002530,1.52e-09,59;UBERON:0003296,1.70e-09,4;UBERON:0010133,1.70e-09,4;UBERON:0000995,2.95e-07,21;UBERON:0005795,5.74e-07,22;UBERON:0003975,5.74e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36349546921671,2.63730746819733,2.2243169471881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13831095675649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,1.63757624423474,0.397901550322736,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36349546921671,2.63730746819733,2.2243169471881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13831095675649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,1.63757624423474,0.397901550322736,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:36611230..36611239,+ | |short_description=p@chr19:36611230..36611239,+ | ||
}} | }} |
Latest revision as of 07:01, 26 July 2015
Short description: | p@chr19:36611230..36611239, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36611230..36611239, + |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.41e-25 | 12 |
epithelial cell of cervix | 9.07e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 7.58e-23 | 6 |
neck of organ | 7.58e-23 | 6 |
uterine epithelium | 9.07e-18 | 2 |
cervix epithelium | 9.07e-18 | 2 |
pituitary gland | 1.27e-17 | 2 |
liver | 1.75e-16 | 19 |
digestive gland | 1.75e-16 | 19 |
liver bud | 1.75e-16 | 19 |
endocrine gland | 1.09e-15 | 35 |
hepatic diverticulum | 2.38e-14 | 22 |
liver primordium | 2.38e-14 | 22 |
digestive tract diverticulum | 9.23e-14 | 23 |
epithelial sac | 1.01e-12 | 25 |
epithelium of foregut-midgut junction | 1.01e-12 | 25 |
anatomical boundary | 1.01e-12 | 25 |
hepatobiliary system | 1.01e-12 | 25 |
foregut-midgut junction | 1.01e-12 | 25 |
septum transversum | 1.01e-12 | 25 |
endocrine system | 2.44e-12 | 45 |
sac | 2.90e-12 | 26 |
exocrine gland | 2.08e-10 | 31 |
exocrine system | 2.08e-10 | 31 |
gland | 1.52e-09 | 59 |
gland of diencephalon | 1.70e-09 | 4 |
neuroendocrine gland | 1.70e-09 | 4 |
uterus | 2.95e-07 | 21 |
embryonic uterus | 5.74e-07 | 22 |
internal female genitalia | 5.74e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.55e-27 | 5 |
disease of anatomical entity | 2.02e-08 | 39 |