FFCP PHASE1:Hg19::chr18:21529811..21529823,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:21529811..21529823,+ | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21529811..21529823,+ | |description=CAGE_peak_at_chr18:21529811..21529823,+ | ||
|id=chr18:21529811..21529823,+ | |id=chr18:21529811..21529823,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.22e-19!43;CL:0000066!2.92e-19!254;CL:0000223!7.07e-14!59;CL:0002251!2.61e-10!21;CL:0002166!3.12e-08!3;CL:0002159!3.49e-08!13;CL:0002368!5.45e-08!13;CL:0002621!5.96e-08!3;CL:0002541!6.24e-08!3;CL:0000349!7.83e-08!3;CL:0002577!7.83e-08!3 | |ontology_enrichment_celltype=CL:0002076!1.22e-19!43;CL:0000066!2.92e-19!254;CL:0000223!7.07e-14!59;CL:0002251!2.61e-10!21;CL:0002166!3.12e-08!3;CL:0002159!3.49e-08!13;CL:0002368!5.45e-08!13;CL:0002621!5.96e-08!3;CL:0002541!6.24e-08!3;CL:0000349!7.83e-08!3;CL:0002577!7.83e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002327;6.36e-19;4!CL:0000349;7.80e-15;19!CL:0000240;1.99e-12;6!CL:0000311;1.99e-12;6!CL:0000079;1.99e-12;6!CL:0000237;1.99e-12;6!CL:0002541;3.21e-12;3!CL:0002166;4.99e-12;3!CL:0002076;7.92e-12;42!CL:0002231;1.01e-11;3!CL:0002577;1.25e-11;3!CL:0002621;1.25e-11;3!CL:0002159;1.80e-09;14!CL:0002336;3.67e-09;1!CL:0002261;3.67e-09;1!CL:0002170;3.67e-09;1!CL:0000244;6.09e-09;4!CL:0000731;6.09e-09;4!CL:0000312;2.85e-07;5!CL:0002537;3.55e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.87e-19,4;CL:0000349,6.57e-15,19;CL:0002076,5.72e-14,42;CL:0000240,1.60e-12,6;CL:0000311,1.60e-12,6;CL:0000079,1.60e-12,6;CL:0000237,1.60e-12,6;CL:0000036,1.60e-12,6;CL:0000357,1.60e-12,6;CL:0000114,1.60e-12,6;CL:0002541,3.31e-12,3;CL:0002166,5.42e-12,3;CL:0002577,1.04e-11,3;CL:0002231,1.29e-11,3;CL:0002621,1.36e-11,3;CL:0000066,2.41e-10,253;CL:0000223,9.40e-10,58;CL:0002159,1.82e-09,14;CL:0002336,2.55e-09,1;CL:0002261,2.55e-09,1;CL:0002170,2.55e-09,1;CL:0000244,5.30e-09,4;CL:0000731,5.30e-09,4;CL:0000312,2.76e-07,5;CL:0002537,3.14e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;1.99e-12;6!CL:0000114;1.99e-12;6 | |||
|ontology_enrichment_disease=DOID:1749!3.20e-10!14 | |ontology_enrichment_disease=DOID:1749!3.20e-10!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001911;6.36e-19;4!UBERON:0005631;3.29e-13;10!UBERON:0000158;3.29e-13;10!UBERON:0003124;3.21e-12;3!UBERON:0000920;3.21e-12;3!UBERON:0000478;1.20e-11;24!UBERON:0001949;1.25e-11;3!UBERON:0000486;7.14e-11;12!UBERON:0001708;3.07e-09;4!UBERON:0008895;3.07e-09;4!UBERON:0001987;6.09e-09;4!UBERON:0011159;1.48e-07;5!UBERON:0000365;2.55e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.18e-20,14;UBERON:0000158,2.18e-20,14;UBERON:0003124,4.81e-19,7;UBERON:0001911,7.87e-19,4;UBERON:0005333,7.87e-19,4;UBERON:0008425,7.87e-19,4;UBERON:0005311,7.87e-19,4;UBERON:0000920,3.31e-12,3;UBERON:0000478,1.05e-11,24;UBERON:0001949,1.36e-11,3;UBERON:0000076,1.09e-09,8;UBERON:0001708,3.26e-09,4;UBERON:0008895,3.26e-09,4;UBERON:0001987,5.30e-09,4;UBERON:0004340,5.30e-09,4;UBERON:0004923,1.53e-08,66;UBERON:0011159,1.55e-07,5;UBERON:0000365,2.28e-07,5 | |||
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| ||
|short_description=p@chr18:21529811..21529823,+ | |short_description=p@chr18:21529811..21529823,+ | ||
}} | }} |
Latest revision as of 00:00, 26 July 2015
Short description: | p@chr18:21529811..21529823, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21529811..21529823, + |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.87e-19 | 4 |
extraembryonic cell | 6.57e-15 | 19 |
endo-epithelial cell | 5.72e-14 | 42 |
stratified squamous epithelial cell | 1.60e-12 | 6 |
keratin accumulating cell | 1.60e-12 | 6 |
stratified epithelial cell | 1.60e-12 | 6 |
keratinizing barrier epithelial cell | 1.60e-12 | 6 |
epithelial fate stem cell | 1.60e-12 | 6 |
stratified epithelial stem cell | 1.60e-12 | 6 |
surface ectodermal cell | 1.60e-12 | 6 |
chorionic membrane mesenchymal stem cell | 3.31e-12 | 3 |
epithelial cell of Malassez | 5.42e-12 | 3 |
placental epithelial cell | 1.04e-11 | 3 |
epithelial cell of prostate | 1.29e-11 | 3 |
gingival epithelial cell | 1.36e-11 | 3 |
epithelial cell | 2.41e-10 | 253 |
endodermal cell | 9.40e-10 | 58 |
general ecto-epithelial cell | 1.82e-09 | 14 |
buccal mucosa cell | 2.55e-09 | 1 |
endothelial cell of viscerocranial mucosa | 2.55e-09 | 1 |
keratinized cell of the oral mucosa | 2.55e-09 | 1 |
transitional epithelial cell | 5.30e-09 | 4 |
urothelial cell | 5.30e-09 | 4 |
keratinocyte | 2.76e-07 | 5 |
amnion mesenchymal stem cell | 3.14e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.18e-20 | 14 |
membranous layer | 2.18e-20 | 14 |
chorion | 4.81e-19 | 7 |
mammary gland | 7.87e-19 | 4 |
mammary bud | 7.87e-19 | 4 |
mammary ridge | 7.87e-19 | 4 |
mammary placode | 7.87e-19 | 4 |
egg chorion | 3.31e-12 | 3 |
extraembryonic structure | 1.05e-11 | 24 |
gingival epithelium | 1.36e-11 | 3 |
external ectoderm | 1.09e-09 | 8 |
jaw skeleton | 3.26e-09 | 4 |
splanchnocranium | 3.26e-09 | 4 |
placenta | 5.30e-09 | 4 |
allantois | 5.30e-09 | 4 |
organ component layer | 1.53e-08 | 66 |
primary subdivision of cranial skeletal system | 1.55e-07 | 5 |
urothelium | 2.28e-07 | 5 |