FFCP PHASE1:Hg19::chr18:21478968..21478985,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:21478968..21478985,- | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21478968..21478985,- | |description=CAGE_peak_at_chr18:21478968..21478985,- | ||
|id=chr18:21478968..21478985,- | |id=chr18:21478968..21478985,- | ||
|ontology_enrichment_celltype=CL:0002076!2.43e-28!43;CL:0000066!2.87e-26!254;CL:0000223!5.10e-19!59;CL:0002159!2.38e-18!13;CL:0002368!1.72e-17!13;CL:0002166!1.15e-10!3;CL:0002621!1.27e-10!3;CL:0002251!5.81e-10!21;CL:0002541!7.24e-10!3;CL:0000362!8.13e-10!8;CL:0000068!8.41e-10!3;CL:0000069!8.41e-10!3;CL:0000307!8.41e-10!3;CL:0000377!8.41e-10!3;CL:0000240!6.78e-09!6;CL:0000311!6.78e-09!6;CL:0000079!6.78e-09!6;CL:0000237!6.78e-09!6;CL:0000036!6.78e-09!6;CL:0000357!6.78e-09!6;CL:0000114!6.78e-09!6;CL:0000063!8.50e-09!578;CL:0002202!2.96e-08!9;CL:0002632!2.96e-08!9;CL:0002327!1.19e-07!4;CL:0002077!1.58e-07!33;CL:0000317!4.32e-07!2;CL:1000448!4.32e-07!2;CL:0002308!4.32e-07!2;CL:0002140!4.32e-07!2;CL:0002536!9.09e-07!2 | |ontology_enrichment_celltype=CL:0002076!2.43e-28!43;CL:0000066!2.87e-26!254;CL:0000223!5.10e-19!59;CL:0002159!2.38e-18!13;CL:0002368!1.72e-17!13;CL:0002166!1.15e-10!3;CL:0002621!1.27e-10!3;CL:0002251!5.81e-10!21;CL:0002541!7.24e-10!3;CL:0000362!8.13e-10!8;CL:0000068!8.41e-10!3;CL:0000069!8.41e-10!3;CL:0000307!8.41e-10!3;CL:0000377!8.41e-10!3;CL:0000240!6.78e-09!6;CL:0000311!6.78e-09!6;CL:0000079!6.78e-09!6;CL:0000237!6.78e-09!6;CL:0000036!6.78e-09!6;CL:0000357!6.78e-09!6;CL:0000114!6.78e-09!6;CL:0000063!8.50e-09!578;CL:0002202!2.96e-08!9;CL:0002632!2.96e-08!9;CL:0002327!1.19e-07!4;CL:0002077!1.58e-07!33;CL:0000317!4.32e-07!2;CL:1000448!4.32e-07!2;CL:0002308!4.32e-07!2;CL:0002140!4.32e-07!2;CL:0002536!9.09e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002159;7.70e-29;14!CL:0002166;2.91e-26;3!CL:0002621;3.30e-26;3!CL:0000240;1.18e-22;6!CL:0000311;1.18e-22;6!CL:0000079;1.18e-22;6!CL:0000237;1.18e-22;6!CL:0000312;6.37e-16;5!CL:0000362;3.44e-15;9!CL:0002541;3.77e-12;3!CL:0002577;8.21e-12;3!CL:0000349;1.04e-10;19!CL:0002076;1.65e-10;42!CL:0002077;1.75e-10;34!CL:0002336;1.76e-09;1!CL:0002261;1.76e-09;1!CL:0002170;1.76e-09;1!CL:0002327;2.46e-09;4!CL:0002251;6.17e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,9.50e-29,14;CL:0002166,2.68e-26,3;CL:0002621,3.45e-26,3;CL:0000240,1.39e-22,6;CL:0000311,1.39e-22,6;CL:0000079,1.39e-22,6;CL:0000237,1.39e-22,6;CL:0000036,1.39e-22,6;CL:0000357,1.39e-22,6;CL:0000114,1.39e-22,6;CL:0000312,7.05e-16,5;CL:0000362,4.29e-15,9;CL:0002541,3.77e-12,3;CL:0002577,6.23e-12,3;CL:0002076,1.12e-11,42;CL:0002077,2.07e-11,34;CL:0000066,3.98e-11,253;CL:0000349,9.79e-11,19;CL:0002336,1.91e-09,1;CL:0002261,1.91e-09,1;CL:0002170,1.91e-09,1;CL:0002327,2.08e-09,4;CL:0000223,3.62e-08,58;CL:0002251,6.32e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000357;1.18e-22;6!CL:0000114;1.18e-22;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.30e-19!14;UBERON:0000158!1.30e-19!14;UBERON:0003124!3.83e-15!7;UBERON:0004119!4.82e-12!169;UBERON:0000925!4.82e-12!169;UBERON:0006595!4.82e-12!169;UBERON:0001949!1.27e-10!3;UBERON:0000478!1.51e-10!24;UBERON:0000476!7.24e-10!3;UBERON:0000920!7.24e-10!3;UBERON:0001004!7.74e-09!72;UBERON:0005153!7.84e-09!37;UBERON:0004807!1.72e-08!28;UBERON:0001708!4.48e-08!4;UBERON:0001704!4.48e-08!4;UBERON:0005911!4.76e-08!82;UBERON:0001911!1.19e-07!4;UBERON:0005333!1.19e-07!4;UBERON:0008425!1.19e-07!4;UBERON:0005311!1.19e-07!4;UBERON:0000065!1.61e-07!53;UBERON:0001987!2.57e-07!4;UBERON:0004340!2.57e-07!4;UBERON:0002419!4.32e-07!2;UBERON:0007771!4.32e-07!2;UBERON:0003297!4.32e-07!2;UBERON:0001821!4.32e-07!2;UBERON:0003487!4.32e-07!2;UBERON:0001820!4.32e-07!2;UBERON:0005089!4.32e-07!2;UBERON:0005088!4.32e-07!2;UBERON:0000305!5.28e-07!7;UBERON:0005157!8.35e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.30e-26;3!UBERON:0001708;7.33e-20;4!UBERON:0008895;7.33e-20;4!UBERON:0011159;5.20e-16;5!UBERON:0010371;2.13e-12;31!UBERON:0003124;3.77e-12;3!UBERON:0000920;3.77e-12;3!UBERON:0000486;1.40e-11;12!UBERON:0003929;1.43e-11;7!UBERON:0003729;1.33e-10;13!UBERON:0003350;3.46e-10;8!UBERON:0001828;3.46e-10;8!UBERON:0001911;2.46e-09;4!UBERON:0001003;3.47e-09;15!UBERON:0007376;3.47e-09;15!UBERON:0001987;4.40e-09;4!UBERON:0000478;1.92e-08;24!UBERON:0005631;5.00e-08;10!UBERON:0000158;5.00e-08;10!UBERON:0011137;1.50e-07;11!UBERON:0010323;1.50e-07;11!UBERON:0000344;6.17e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.45e-26,3;UBERON:0001708,6.89e-20,4;UBERON:0008895,6.89e-20,4;UBERON:0003124,3.43e-19,7;UBERON:0011159,4.95e-16,5;UBERON:0005631,1.29e-14,14;UBERON:0000158,1.29e-14,14;UBERON:0010188,1.87e-13,6;UBERON:0002539,1.87e-13,6;UBERON:0008816,1.87e-13,6;UBERON:0000920,3.77e-12,3;UBERON:0003729,1.38e-10,13;UBERON:0003102,3.15e-10,99;UBERON:0003350,3.51e-10,8;UBERON:0001828,3.51e-10,8;UBERON:0001911,2.08e-09,4;UBERON:0005333,2.08e-09,4;UBERON:0008425,2.08e-09,4;UBERON:0005311,2.08e-09,4;UBERON:0001987,3.58e-09,4;UBERON:0004340,3.58e-09,4;UBERON:0001003,3.95e-09,15;UBERON:0007376,3.95e-09,15;UBERON:0007383,3.95e-09,15;UBERON:0004923,6.82e-09,66;UBERON:0000478,1.82e-08,24;UBERON:0010323,1.46e-07,11;UBERON:0000344,6.32e-07,20 | |||
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| ||
|short_description=p@chr18:21478968..21478985,- | |short_description=p@chr18:21478968..21478985,- | ||
}} | }} |
Latest revision as of 23:59, 25 July 2015
Short description: | p@chr18:21478968..21478985, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21478968..21478985, - |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 9.50e-29 | 14 |
epithelial cell of Malassez | 2.68e-26 | 3 |
gingival epithelial cell | 3.45e-26 | 3 |
stratified squamous epithelial cell | 1.39e-22 | 6 |
keratin accumulating cell | 1.39e-22 | 6 |
stratified epithelial cell | 1.39e-22 | 6 |
keratinizing barrier epithelial cell | 1.39e-22 | 6 |
epithelial fate stem cell | 1.39e-22 | 6 |
stratified epithelial stem cell | 1.39e-22 | 6 |
surface ectodermal cell | 1.39e-22 | 6 |
keratinocyte | 7.05e-16 | 5 |
epidermal cell | 4.29e-15 | 9 |
chorionic membrane mesenchymal stem cell | 3.77e-12 | 3 |
placental epithelial cell | 6.23e-12 | 3 |
endo-epithelial cell | 1.12e-11 | 42 |
ecto-epithelial cell | 2.07e-11 | 34 |
epithelial cell | 3.98e-11 | 253 |
extraembryonic cell | 9.79e-11 | 19 |
buccal mucosa cell | 1.91e-09 | 1 |
endothelial cell of viscerocranial mucosa | 1.91e-09 | 1 |
keratinized cell of the oral mucosa | 1.91e-09 | 1 |
mammary gland epithelial cell | 2.08e-09 | 4 |
endodermal cell | 3.62e-08 | 58 |
epithelial cell of alimentary canal | 6.32e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.45e-26 | 3 |
jaw skeleton | 6.89e-20 | 4 |
splanchnocranium | 6.89e-20 | 4 |
chorion | 3.43e-19 | 7 |
primary subdivision of cranial skeletal system | 4.95e-16 | 5 |
extraembryonic membrane | 1.29e-14 | 14 |
membranous layer | 1.29e-14 | 14 |
protuberance | 1.87e-13 | 6 |
pharyngeal arch | 1.87e-13 | 6 |
embryonic head | 1.87e-13 | 6 |
egg chorion | 3.77e-12 | 3 |
mouth mucosa | 1.38e-10 | 13 |
surface structure | 3.15e-10 | 99 |
epithelium of mucosa | 3.51e-10 | 8 |
gingiva | 3.51e-10 | 8 |
mammary gland | 2.08e-09 | 4 |
mammary bud | 2.08e-09 | 4 |
mammary ridge | 2.08e-09 | 4 |
mammary placode | 2.08e-09 | 4 |
placenta | 3.58e-09 | 4 |
allantois | 3.58e-09 | 4 |
skin epidermis | 3.95e-09 | 15 |
outer epithelium | 3.95e-09 | 15 |
enveloping layer of ectoderm | 3.95e-09 | 15 |
organ component layer | 6.82e-09 | 66 |
extraembryonic structure | 1.82e-08 | 24 |
cranial skeletal system | 1.46e-07 | 11 |
mucosa | 6.32e-07 | 20 |