FFCP PHASE1:Hg19::chr17:38633210..38633225,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38633210..38633225,- | |||
|coexpression_cluster_id=C918 | |||
|description=CAGE_peak_at_chr17:38633210..38633225,- | |description=CAGE_peak_at_chr17:38633210..38633225,- | ||
|id=chr17:38633210..38633225,- | |id=chr17:38633210..38633225,- | ||
|ontology_enrichment_celltype=CL:0000066!1.44e-32!254;CL:0002076!2.57e-24!43;CL:0000223!9.41e-22!59;CL:0002159!2.71e-14!13;CL:0002251!3.52e-14!21;CL:0002368!3.05e-13!13;CL:0000622!2.74e-09!5;CL:0002202!1.04e-07!9;CL:0002632!1.04e-07!9;CL:0000154!1.28e-07!6;CL:0000240!3.21e-07!6;CL:0000311!3.21e-07!6;CL:0000079!3.21e-07!6;CL:0000237!3.21e-07!6;CL:0000036!3.21e-07!6;CL:0000357!3.21e-07!6;CL:0000114!3.21e-07!6;CL:0000362!3.39e-07!8 | |ontology_enrichment_celltype=CL:0000066!1.44e-32!254;CL:0002076!2.57e-24!43;CL:0000223!9.41e-22!59;CL:0002159!2.71e-14!13;CL:0002251!3.52e-14!21;CL:0002368!3.05e-13!13;CL:0000622!2.74e-09!5;CL:0002202!1.04e-07!9;CL:0002632!1.04e-07!9;CL:0000154!1.28e-07!6;CL:0000240!3.21e-07!6;CL:0000311!3.21e-07!6;CL:0000079!3.21e-07!6;CL:0000237!3.21e-07!6;CL:0000036!3.21e-07!6;CL:0000357!3.21e-07!6;CL:0000114!3.21e-07!6;CL:0000362!3.39e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.24e-19;14!CL:0000622;2.27e-15;5!CL:0002076;4.99e-15;42!CL:0000349;1.64e-13;19!CL:0000154;9.57e-13;6!CL:0002251;8.81e-11;20!CL:0002623;2.91e-10;3!CL:0002368;5.78e-10;13!CL:0002166;2.03e-09;3!CL:0002577;2.35e-09;3!CL:0002621;3.18e-09;3!CL:0002541;5.80e-09;3!CL:0000307;5.80e-09;3!CL:0000240;1.10e-08;6!CL:0000311;1.10e-08;6!CL:0000079;1.10e-08;6!CL:0000237;1.10e-08;6!CL:0002077;1.32e-08;34!CL:0000150;2.31e-08;9!CL:0000362;3.12e-08;9!CL:0002327;4.41e-08;4!CL:0000244;5.31e-08;4!CL:0000731;5.31e-08;4!CL:0002536;2.27e-07;2!CL:0000575;3.14e-07;2!CL:0000317;8.43e-07;2!CL:1000448;8.43e-07;2!CL:0002308;8.43e-07;2!CL:0002140;8.43e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.62e-31,253;CL:0002159,1.22e-19,14;CL:0002076,1.12e-18,42;CL:0000622,2.60e-15,5;CL:0000223,9.95e-14,58;CL:0000349,1.27e-13,19;CL:0000154,1.07e-12,6;CL:0002251,1.02e-10,20;CL:0002623,2.83e-10,3;CL:0002368,4.49e-10,13;CL:0002077,7.26e-10,34;CL:0002166,1.66e-09,3;CL:0002577,1.66e-09,3;CL:0002621,3.74e-09,3;CL:0000068,4.97e-09,3;CL:0000069,4.97e-09,3;CL:0000307,4.97e-09,3;CL:0000377,4.97e-09,3;CL:0002541,6.24e-09,3;CL:0000240,1.30e-08,6;CL:0000311,1.30e-08,6;CL:0000079,1.30e-08,6;CL:0000237,1.30e-08,6;CL:0000036,1.30e-08,6;CL:0000357,1.30e-08,6;CL:0000114,1.30e-08,6;CL:0000150,2.49e-08,9;CL:0000362,3.91e-08,9;CL:0002327,4.48e-08,4;CL:0000244,5.50e-08,4;CL:0000731,5.50e-08,4;CL:0002536,2.14e-07,2;CL:0000575,2.42e-07,2;CL:0000317,9.92e-07,2;CL:1000448,9.92e-07,2;CL:0002308,9.92e-07,2;CL:0002140,9.92e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;5.80e-09;3!CL:0000357;1.10e-08;6!CL:0000114;1.10e-08;6!CL:0000223;1.91e-08;58!UBERON:0008947;4.19e-08;29 | |||
|ontology_enrichment_disease=DOID:305!5.65e-19!106;DOID:1749!7.47e-11!14;DOID:0050687!1.06e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.32e-28!169;UBERON:0000925!5.32e-28!169;UBERON:0006595!5.32e-28!169;UBERON:0001004!1.43e-25!72;UBERON:0000077!3.16e-20!130;UBERON:0001007!2.97e-19!155;UBERON:0001555!2.97e-19!155;UBERON:0007026!2.97e-19!155;UBERON:0000065!2.31e-18!53;UBERON:0004921!5.28e-16!129;UBERON:0004185!5.28e-16!129;UBERON:0000161!8.89e-16!35;UBERON:0000072!1.43e-15!46;UBERON:0001737!7.73e-15!9;UBERON:0001041!1.23e-14!98;UBERON:0001557!1.82e-13!19;UBERON:0000166!2.36e-13!21;UBERON:0005631!4.68e-13!14;UBERON:0000158!4.68e-13!14;UBERON:0008947!5.64e-13!38;UBERON:0003258!5.64e-13!38;UBERON:0003124!2.91e-11!7;UBERON:0000165!1.22e-10!28;UBERON:0000930!1.22e-10!28;UBERON:0003102!4.25e-09!95;UBERON:0005911!4.45e-08!82;UBERON:0003729!4.91e-08!5;UBERON:0005153!6.22e-08!37;UBERON:0002530!9.42e-08!59;UBERON:0001987!3.38e-07!4;UBERON:0004340!3.38e-07!4;UBERON:0000064!3.53e-07!219;UBERON:0001044!4.17e-07!6;UBERON:0003293!4.17e-07!6;UBERON:0003294!4.17e-07!6;UBERON:0010047!4.17e-07!6;UBERON:0000167!4.17e-07!6;UBERON:0002365!5.41e-07!31;UBERON:0002330!5.41e-07!31;UBERON:0000344!5.55e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.13e-25;9!UBERON:0001557;4.13e-25;9!UBERON:0005631;1.23e-13;10!UBERON:0000158;1.23e-13;10!UBERON:0000065;4.80e-13;44!UBERON:0001004;2.53e-10;65!UBERON:0000478;2.89e-10;24!UBERON:0000072;7.81e-10;37!UBERON:0001949;3.18e-09;3!UBERON:0003124;5.80e-09;3!UBERON:0000920;5.80e-09;3!UBERON:0000486;1.21e-08;12!UBERON:0001911;4.41e-08;4!UBERON:0000305;3.01e-07;7!UBERON:0001708;3.71e-07;4!UBERON:0008895;3.71e-07;4!UBERON:0001987;4.13e-07;4!UBERON:0000161;8.28e-07;19!UBERON:0000166;8.28e-07;19!UBERON:0002419;8.43e-07;2!UBERON:0007771;8.43e-07;2!UBERON:0003297;8.43e-07;2!UBERON:0001821;8.43e-07;2!UBERON:0003487;8.43e-07;2!UBERON:0001820;8.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.35e-25,9;UBERON:0005631,2.99e-19,14;UBERON:0000158,2.99e-19,14;UBERON:0001004,1.75e-16,74;UBERON:0003124,3.02e-14,7;UBERON:0004119,1.36e-13,160;UBERON:0000925,1.36e-13,160;UBERON:0006595,1.36e-13,160;UBERON:0000065,2.28e-11,54;UBERON:0001557,5.37e-11,19;UBERON:0000478,2.38e-10,24;UBERON:0008947,6.27e-10,38;UBERON:0003258,6.27e-10,38;UBERON:0001949,3.74e-09,3;UBERON:0003102,5.04e-09,99;UBERON:0000920,6.24e-09,3;UBERON:0001911,4.48e-08,4;UBERON:0005333,4.48e-08,4;UBERON:0008425,4.48e-08,4;UBERON:0005311,4.48e-08,4;UBERON:0000072,1.73e-07,47;UBERON:0004923,1.84e-07,66;UBERON:0000305,2.62e-07,7;UBERON:0001987,3.19e-07,4;UBERON:0001708,3.19e-07,4;UBERON:0008895,3.19e-07,4;UBERON:0004340,3.19e-07,4;UBERON:0002419,9.92e-07,2;UBERON:0007771,9.92e-07,2;UBERON:0003297,9.92e-07,2;UBERON:0001821,9.92e-07,2;UBERON:0003487,9.92e-07,2;UBERON:0001820,9.92e-07,2;UBERON:0005089,9.92e-07,2;UBERON:0005088,9.92e-07,2 | |||
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| ||
|short_description=p@chr17:38633210..38633225,- | |short_description=p@chr17:38633210..38633225,- | ||
}} | }} |
Latest revision as of 16:30, 25 July 2015
Short description: | p@chr17:38633210..38633225, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38633210..38633225, - |
Coexpression cluster: | C918_Keratinocyte_Mammary_Prostate_Urothelial_salivary_Corneal_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 3.35e-25 | 9 |
extraembryonic membrane | 2.99e-19 | 14 |
membranous layer | 2.99e-19 | 14 |
respiratory system | 1.75e-16 | 74 |
chorion | 3.02e-14 | 7 |
endoderm-derived structure | 1.36e-13 | 160 |
endoderm | 1.36e-13 | 160 |
presumptive endoderm | 1.36e-13 | 160 |
respiratory tract | 2.28e-11 | 54 |
upper respiratory tract | 5.37e-11 | 19 |
extraembryonic structure | 2.38e-10 | 24 |
respiratory primordium | 6.27e-10 | 38 |
endoderm of foregut | 6.27e-10 | 38 |
gingival epithelium | 3.74e-09 | 3 |
surface structure | 5.04e-09 | 99 |
egg chorion | 6.24e-09 | 3 |
mammary gland | 4.48e-08 | 4 |
mammary bud | 4.48e-08 | 4 |
mammary ridge | 4.48e-08 | 4 |
mammary placode | 4.48e-08 | 4 |
segment of respiratory tract | 1.73e-07 | 47 |
organ component layer | 1.84e-07 | 66 |
amnion | 2.62e-07 | 7 |
placenta | 3.19e-07 | 4 |
jaw skeleton | 3.19e-07 | 4 |
splanchnocranium | 3.19e-07 | 4 |
allantois | 3.19e-07 | 4 |
skin gland | 9.92e-07 | 2 |
epidermis gland | 9.92e-07 | 2 |
gland of integumental system | 9.92e-07 | 2 |
sebaceous gland | 9.92e-07 | 2 |
skin sebaceous gland | 9.92e-07 | 2 |
sweat gland | 9.92e-07 | 2 |
sweat gland placode | 9.92e-07 | 2 |
sebaceous gland placode | 9.92e-07 | 2 |