FFCP PHASE1:Hg19::chr17:26890583..26890593,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:26890583..26890593,- | |||
|coexpression_cluster_id=C889 | |||
|description=CAGE_peak_at_chr17:26890583..26890593,- | |description=CAGE_peak_at_chr17:26890583..26890593,- | ||
|id=chr17:26890583..26890593,- | |id=chr17:26890583..26890593,- | ||
|ontology_enrichment_celltype=CL:0002586!1.65e-10!3;CL:0002504!4.94e-09!3;CL:1000279!4.94e-09!3;CL:1000280!4.94e-09!3;CL:0000149!5.87e-08!4;CL:0000077!4.34e-07!19;CL:0002195!6.45e-07!2;CL:0002571!6.45e-07!2;CL:0002588!9.71e-07!2 | |ontology_enrichment_celltype=CL:0002586!1.65e-10!3;CL:0002504!4.94e-09!3;CL:1000279!4.94e-09!3;CL:1000280!4.94e-09!3;CL:0000149!5.87e-08!4;CL:0000077!4.34e-07!19;CL:0002195!6.45e-07!2;CL:0002571!6.45e-07!2;CL:0002588!9.71e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002586;2.87e-30;3!CL:0000149;5.43e-23;4!CL:0002097;1.65e-12;2!CL:0000650;2.74e-12;2!CL:1000500;2.74e-12;2!CL:1000618;2.74e-12;2!CL:1001318;2.74e-12;2!CL:0002173;2.74e-12;2!CL:0000174;8.96e-09;3!CL:0000632;1.26e-08;3!CL:0000147;2.90e-07;14!CL:0000669;8.85e-07;4!CL:0000306;8.85e-07;4!CL:0002222;8.85e-07;4!CL:0002224;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.98e-30,3;CL:0000149,4.11e-23,4;CL:0002097,1.65e-12,2;CL:0000650,3.24e-12,2;CL:1000500,3.24e-12,2;CL:1000618,3.24e-12,2;CL:1001318,3.24e-12,2;CL:0002173,3.24e-12,2;CL:0000174,8.96e-09,3;CL:0000632,1.12e-08,3;CL:0000147,2.68e-07,14;CL:0000306,9.11e-07,4;CL:0002222,9.11e-07,4;CL:0002224,9.11e-07,4;CL:0000669,9.63e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.20e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.57e-15!9;UBERON:0001781!1.65e-10!3;UBERON:0001782!1.65e-10!3;UBERON:0005424!1.65e-10!3;UBERON:0001557!1.50e-08!19;UBERON:0003104!8.35e-08!238;UBERON:0009142!8.35e-08!238;UBERON:0007625!5.65e-07!11;UBERON:0000481!8.01e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;2.87e-30;3!UBERON:0001782;2.87e-30;3!UBERON:0007625;1.17e-18;11!UBERON:0000966;1.29e-18;5!UBERON:0005388;1.29e-18;5!UBERON:0001802;1.29e-18;5!UBERON:0003567;2.74e-12;2!UBERON:0003838;2.74e-12;2!UBERON:0003586;2.74e-12;2!UBERON:0005169;2.74e-12;2!UBERON:0002321;2.74e-12;2!UBERON:0005215;2.74e-12;2!UBERON:0002303;2.74e-12;2!UBERON:0002319;2.74e-12;2!UBERON:0000019;4.22e-11;19!UBERON:0000047;4.22e-11;19!UBERON:0004088;4.22e-11;19!UBERON:0010230;4.22e-11;19!UBERON:0000970;1.40e-10;20!UBERON:0002104;4.17e-10;21!UBERON:0001456;4.17e-10;21!UBERON:0000020;2.78e-09;23!UBERON:0001032;6.39e-09;24!UBERON:0004456;6.39e-09;24!UBERON:0002369;8.96e-09;3!UBERON:0001235;8.96e-09;3!UBERON:0006858;8.96e-09;3!UBERON:0001851;7.52e-07;15!UBERON:0010077;8.85e-07;4!UBERON:0005389;8.85e-07;4!UBERON:0003891;8.85e-07;4!UBERON:0000484;8.85e-07;4!UBERON:0000965;8.85e-07;4!UBERON:0001803;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.98e-30,3;UBERON:0005424,1.98e-30,3;UBERON:0001781,4.11e-23,4;UBERON:0007625,1.04e-18,11;UBERON:0000966,9.04e-16,6;UBERON:0005388,9.04e-16,6;UBERON:0001802,9.04e-16,6;UBERON:0003567,3.24e-12,2;UBERON:0003838,3.24e-12,2;UBERON:0003586,3.24e-12,2;UBERON:0005169,3.24e-12,2;UBERON:0002321,3.24e-12,2;UBERON:0005215,3.24e-12,2;UBERON:0002303,3.24e-12,2;UBERON:0002319,3.24e-12,2;UBERON:0000019,1.31e-10,20;UBERON:0000047,1.31e-10,20;UBERON:0010312,1.31e-10,20;UBERON:0004088,1.31e-10,20;UBERON:0010230,1.31e-10,20;UBERON:0003072,1.31e-10,20;UBERON:0004128,1.31e-10,20;UBERON:0003071,1.31e-10,20;UBERON:0000970,3.92e-10,21;UBERON:0002104,3.92e-10,21;UBERON:0001456,1.06e-09,22;UBERON:0000020,6.05e-09,24;UBERON:0001032,6.05e-09,24;UBERON:0004456,6.05e-09,24;UBERON:0002369,8.96e-09,3;UBERON:0001235,8.96e-09,3;UBERON:0006858,8.96e-09,3;UBERON:0005085,4.67e-07,31;UBERON:0001851,7.86e-07,15;UBERON:0010077,9.11e-07,4;UBERON:0005389,9.11e-07,4;UBERON:0000484,9.11e-07,4;UBERON:0002546,9.11e-07,4;UBERON:0000965,9.11e-07,4;UBERON:0001803,9.11e-07,4;UBERON:0003073,9.11e-07,4;UBERON:0005426,9.11e-07,4;UBERON:0003891,9.63e-07,4 | |||
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| ||
|short_description=p@chr17:26890583..26890593,- | |short_description=p@chr17:26890583..26890593,- | ||
}} | }} |
Latest revision as of 14:59, 25 July 2015
Short description: | p@chr17:26890583..26890593, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:26890583..26890593, - |
Coexpression cluster: | C889_mesothelioma_mesodermal_lung_placenta_umbilical_Urothelial_Mallassezderived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.98e-30 | 3 |
visual pigment cell | 4.11e-23 | 4 |
cortical cell of adrenal gland | 1.65e-12 | 2 |
mesangial cell | 3.24e-12 | 2 |
kidney interstitial cell | 3.24e-12 | 2 |
juxtaglomerular complex cell | 3.24e-12 | 2 |
renal interstitial pericyte | 3.24e-12 | 2 |
extraglomerular mesangial cell | 3.24e-12 | 2 |
steroid hormone secreting cell | 8.96e-09 | 3 |
hepatic stellate cell | 1.12e-08 | 3 |
pigment cell | 2.68e-07 | 14 |
crystallin accumulating cell | 9.11e-07 | 4 |
vertebrate lens cell | 9.11e-07 | 4 |
lens epithelial cell | 9.11e-07 | 4 |
pericyte cell | 9.63e-07 | 4 |