FFCP PHASE1:Hg19::chr16:3071213..3071278,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:3071213..3071278,+ | |||
|coexpression_cluster_id=C1761 | |coexpression_cluster_id=C1761 | ||
|description=CAGE_peak_at_chr16:3071213..3071278,+ | |description=CAGE_peak_at_chr16:3071213..3071278,+ | ||
|id=chr16:3071213..3071278,+ | |id=chr16:3071213..3071278,+ | ||
|ontology_enrichment_celltype=CL:0000220!1.45e-28!246;CL:0002321!1.48e-28!248;CL:0000066!1.93e-28!254;CL:0000548!8.17e-25!679;CL:0000004!8.17e-25!679;CL:0000255!8.17e-25!679;CL:0000012!3.81e-24!682;CL:0000055!5.91e-22!180;CL:0000222!5.57e-16!119;CL:0000144!8.43e-15!625;CL:0000003!6.33e-12!722;CL:0000680!6.21e-11!57;CL:0000056!6.21e-11!57;CL:0000355!6.21e-11!57;CL:0002371!6.94e-11!591;CL:0000393!1.71e-10!60;CL:0000211!1.71e-10!60;CL:0000183!2.13e-10!59;CL:0000192!3.77e-10!42;CL:0000514!3.77e-10!42;CL:0000187!7.67e-10!54;CL:1000497!6.50e-09!18;CL:0002518!6.50e-09!18;CL:0000359!7.87e-09!32;CL:1000449!9.08e-09!16;CL:0000057!1.62e-08!75;CL:0000063!1.25e-07!578;CL:0000077!1.38e-07!19;CL:0000076!3.20e-07!62;CL:1000507!3.56e-07!12;CL:1000494!3.56e-07!12;CL:0002681!8.06e-07!13;CL:0002584!8.06e-07!13;CL:0002076!8.42e-07!43 | |ontology_enrichment_celltype=CL:0000220!1.45e-28!246;CL:0002321!1.48e-28!248;CL:0000066!1.93e-28!254;CL:0000548!8.17e-25!679;CL:0000004!8.17e-25!679;CL:0000255!8.17e-25!679;CL:0000012!3.81e-24!682;CL:0000055!5.91e-22!180;CL:0000222!5.57e-16!119;CL:0000144!8.43e-15!625;CL:0000003!6.33e-12!722;CL:0000680!6.21e-11!57;CL:0000056!6.21e-11!57;CL:0000355!6.21e-11!57;CL:0002371!6.94e-11!591;CL:0000393!1.71e-10!60;CL:0000211!1.71e-10!60;CL:0000183!2.13e-10!59;CL:0000192!3.77e-10!42;CL:0000514!3.77e-10!42;CL:0000187!7.67e-10!54;CL:1000497!6.50e-09!18;CL:0002518!6.50e-09!18;CL:0000359!7.87e-09!32;CL:1000449!9.08e-09!16;CL:0000057!1.62e-08!75;CL:0000063!1.25e-07!578;CL:0000077!1.38e-07!19;CL:0000076!3.20e-07!62;CL:1000507!3.56e-07!12;CL:1000494!3.56e-07!12;CL:0002681!8.06e-07!13;CL:0002584!8.06e-07!13;CL:0002076!8.42e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:1000497;5.23e-10;17!CL:0002518;5.23e-10;17!CL:1000449;6.18e-10;15!CL:1000507;9.91e-09;10!CL:1000494;9.91e-09;10!CL:0000359;1.27e-08;32!CL:0000077;6.18e-08;19!CL:0002681;7.98e-08;12!CL:0002584;7.98e-08;12!CL:0000192;3.36e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.48e-28,250;CL:0000066,1.19e-27,253;CL:0000222,1.28e-15,121;CL:0000680,1.50e-10,58;CL:0000056,1.50e-10,58;CL:0000355,1.50e-10,58;CL:0000393,3.90e-10,61;CL:0000211,3.90e-10,61;CL:1000497,4.86e-10,17;CL:0002518,4.86e-10,17;CL:1000449,5.99e-10,15;CL:0000192,1.01e-09,43;CL:0000514,1.01e-09,43;CL:0000187,1.97e-09,55;CL:0000359,6.19e-09,32;CL:0000057,7.71e-09,76;CL:1000507,9.89e-09,10;CL:1000494,9.89e-09,10;CL:0000077,5.81e-08,19;CL:0002681,7.82e-08,12;CL:0002584,7.82e-08,12;CL:0000221,5.92e-07,72;CL:0002076,7.63e-07,42;CL:0000076,9.19e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000514;3.36e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!4.98e-20!143;UBERON:0002100!1.73e-19!216;UBERON:0003104!4.67e-17!238;UBERON:0009142!4.67e-17!238;UBERON:0000486!6.00e-16!82;UBERON:0000914!4.34e-15!83;UBERON:0002329!4.34e-15!83;UBERON:0003077!4.34e-15!83;UBERON:0003059!4.34e-15!83;UBERON:0007282!4.34e-15!83;UBERON:0009618!4.34e-15!83;UBERON:0007285!4.34e-15!83;UBERON:0004290!1.57e-13!70;UBERON:0000119!4.78e-13!312;UBERON:0003914!9.18e-13!118;UBERON:0000481!1.27e-12!347;UBERON:0000468!1.29e-12!659;UBERON:0000490!1.42e-12!138;UBERON:0000475!1.57e-12!365;UBERON:0000483!2.02e-12!309;UBERON:0001134!9.70e-12!61;UBERON:0002036!9.70e-12!61;UBERON:0003082!9.70e-12!61;UBERON:0000467!1.99e-11!625;UBERON:0000480!2.53e-11!626;UBERON:0002385!3.81e-11!63;UBERON:0001015!3.81e-11!63;UBERON:0000383!3.81e-11!63;UBERON:0000926!2.76e-09!448;UBERON:0004120!2.76e-09!448;UBERON:0006603!2.76e-09!448;UBERON:0006554!3.96e-09!44;UBERON:0002049!5.04e-09!79;UBERON:0007798!5.04e-09!79;UBERON:0001048!6.70e-09!168;UBERON:0004211!9.08e-09!16;UBERON:0001285!9.08e-09!16;UBERON:0007684!9.08e-09!16;UBERON:0003220!9.08e-09!16;UBERON:0004208!9.08e-09!16;UBERON:0001008!1.78e-08!45;UBERON:0009569!1.96e-08!113;UBERON:0000922!2.23e-08!612;UBERON:0001637!2.83e-08!42;UBERON:0003509!2.83e-08!42;UBERON:0004572!2.83e-08!42;UBERON:0000923!3.23e-08!604;UBERON:0005291!3.23e-08!604;UBERON:0006598!3.23e-08!604;UBERON:0002532!3.23e-08!604;UBERON:0006555!3.61e-08!17;UBERON:0005103!3.61e-08!17;UBERON:0000083!3.61e-08!17;UBERON:0009201!3.61e-08!17;UBERON:0004819!3.61e-08!17;UBERON:0006553!3.61e-08!17;UBERON:0003074!3.61e-08!17;UBERON:0003060!3.61e-08!17;UBERON:0005085!5.23e-08!29;UBERON:0002050!5.26e-08!605;UBERON:0005423!5.26e-08!605;UBERON:0001981!5.73e-08!60;UBERON:0007500!5.73e-08!60;UBERON:0004537!5.73e-08!60;UBERON:0006965!5.73e-08!60;UBERON:0000080!8.94e-08!18;UBERON:0002120!8.94e-08!18;UBERON:0004875!8.94e-08!18;UBERON:0005721!8.94e-08!18;UBERON:0005754!8.94e-08!18;UBERON:0007297!8.94e-08!18;UBERON:0000058!1.03e-07!26;UBERON:0000055!1.05e-07!69;UBERON:0004872!2.06e-07!84;UBERON:0004876!3.54e-07!20;UBERON:0009773!3.56e-07!12;UBERON:0001231!3.56e-07!12;UBERON:0004810!3.56e-07!12;UBERON:0000353!4.16e-07!17;UBERON:0004573!4.22e-07!33;UBERON:0004571!4.22e-07!33;UBERON:0003103!7.33e-07!69;UBERON:0001225!8.06e-07!13;UBERON:0008987!8.06e-07!13 | |ontology_enrichment_uberon=UBERON:0005256!4.98e-20!143;UBERON:0002100!1.73e-19!216;UBERON:0003104!4.67e-17!238;UBERON:0009142!4.67e-17!238;UBERON:0000486!6.00e-16!82;UBERON:0000914!4.34e-15!83;UBERON:0002329!4.34e-15!83;UBERON:0003077!4.34e-15!83;UBERON:0003059!4.34e-15!83;UBERON:0007282!4.34e-15!83;UBERON:0009618!4.34e-15!83;UBERON:0007285!4.34e-15!83;UBERON:0004290!1.57e-13!70;UBERON:0000119!4.78e-13!312;UBERON:0003914!9.18e-13!118;UBERON:0000481!1.27e-12!347;UBERON:0000468!1.29e-12!659;UBERON:0000490!1.42e-12!138;UBERON:0000475!1.57e-12!365;UBERON:0000483!2.02e-12!309;UBERON:0001134!9.70e-12!61;UBERON:0002036!9.70e-12!61;UBERON:0003082!9.70e-12!61;UBERON:0000467!1.99e-11!625;UBERON:0000480!2.53e-11!626;UBERON:0002385!3.81e-11!63;UBERON:0001015!3.81e-11!63;UBERON:0000383!3.81e-11!63;UBERON:0000926!2.76e-09!448;UBERON:0004120!2.76e-09!448;UBERON:0006603!2.76e-09!448;UBERON:0006554!3.96e-09!44;UBERON:0002049!5.04e-09!79;UBERON:0007798!5.04e-09!79;UBERON:0001048!6.70e-09!168;UBERON:0004211!9.08e-09!16;UBERON:0001285!9.08e-09!16;UBERON:0007684!9.08e-09!16;UBERON:0003220!9.08e-09!16;UBERON:0004208!9.08e-09!16;UBERON:0001008!1.78e-08!45;UBERON:0009569!1.96e-08!113;UBERON:0000922!2.23e-08!612;UBERON:0001637!2.83e-08!42;UBERON:0003509!2.83e-08!42;UBERON:0004572!2.83e-08!42;UBERON:0000923!3.23e-08!604;UBERON:0005291!3.23e-08!604;UBERON:0006598!3.23e-08!604;UBERON:0002532!3.23e-08!604;UBERON:0006555!3.61e-08!17;UBERON:0005103!3.61e-08!17;UBERON:0000083!3.61e-08!17;UBERON:0009201!3.61e-08!17;UBERON:0004819!3.61e-08!17;UBERON:0006553!3.61e-08!17;UBERON:0003074!3.61e-08!17;UBERON:0003060!3.61e-08!17;UBERON:0005085!5.23e-08!29;UBERON:0002050!5.26e-08!605;UBERON:0005423!5.26e-08!605;UBERON:0001981!5.73e-08!60;UBERON:0007500!5.73e-08!60;UBERON:0004537!5.73e-08!60;UBERON:0006965!5.73e-08!60;UBERON:0000080!8.94e-08!18;UBERON:0002120!8.94e-08!18;UBERON:0004875!8.94e-08!18;UBERON:0005721!8.94e-08!18;UBERON:0005754!8.94e-08!18;UBERON:0007297!8.94e-08!18;UBERON:0000058!1.03e-07!26;UBERON:0000055!1.05e-07!69;UBERON:0004872!2.06e-07!84;UBERON:0004876!3.54e-07!20;UBERON:0009773!3.56e-07!12;UBERON:0001231!3.56e-07!12;UBERON:0004810!3.56e-07!12;UBERON:0000353!4.16e-07!17;UBERON:0004573!4.22e-07!33;UBERON:0004571!4.22e-07!33;UBERON:0003103!7.33e-07!69;UBERON:0001225!8.06e-07!13;UBERON:0008987!8.06e-07!13 | ||
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|phase1_expression=9.6289541013395,5.78071414505655,7.18867460889453,9.00659685178174,1.34088328328186,10.4680622892044,0,3.79031924056099,0.261185628199839,31.6996778086946,123.51080673112,13.7618064442009,20.8375912800478,6.18831764800233,8.61633176892581,8.74022690387308,8.43772339233568,9.49403117503585,19.0293791528298,18.9606429438253,38.9641320276523,10.9709152517331,4.29353980696585,15.1930611830901,16.3205431473244,0,0,0,1.18009283054671,0,0.77408061658038,27.5826367343678,22.5904439083688,12.201882335504,0,0,0,0.553995408531877,0,0.651032612147555,0,0,0,0.436194716338694,1.88937971844405,0.727752183563449,0.232429036905685,1.6446715520873,0.929119112685311,0.575384784644301,1.2808035326455,0,0,1.29096936716765,1.35426486594342,0.941211697713023,0.545812300115692,0,0,0.320929027076094,1.91801137739712,0.659702600373432,0.199463657621632,1.70489900213078,0,0.56738522469114,0,1.00499466102697,1.5644487552606,0.868755378820466,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.68511379871414,7.22878304769133,3.00802746381534,7.24232594804119,15.1104329939709,17.0322204605923,16.1654537350556,19.5121869767056,17.1277832101596,0.785874452986276,17.486173838042,7.78647329847302,0,0,0,0,0,0,1.59009925893364,2.58070378531837,2.42998351125316,6.21838736116411,4.61449379830897,4.40188867104108,4.59788926380983,0.516833518338658,4.26919515224052,1.33888245105868,4.43112248820062,3.80136052859256,0.732186172644509,2.20597848207521,1.62028389576352,1.51809538082936,0.898117490504679,2.0270066486998,7.66583187329416,4.74632829784064,3.48083313467774,0,0,13.9550096685611,13.4182426957736,12.9163121897871,5.82600395578163,4.58938593198102,7.4480360261655,8.97084160227691,3.20246987189115,31.8201137458136,0.622422070799533,2.55950276932407,3.75962377160955,0.605429710579726,0,6.09235722767871,4.05808099879417,6.27519003698894,3.88566569434683,5.87172493218824,9.2267578289835,8.70795001553941,3.87892925384297,11.4235915099944,1.44656093646072,3.56400857184616,5.19260551484969,15.4727431529464,15.8095991199572,4.37673896280572,5.75545191411035,4.98715407871529,7.46261955497424,15.63087758575,2.70428506031874,9.07457465280168,5.56107870635472,3.84403299873421,2.7551147150743,8.10245959427886,3.81294358182224,3.86460810068444,3.90845398296339,10.4641325989585,12.1796256451498,6.56327813034698,2.85354685791128,0.323292113637624,4.9701342952326,15.3143189306013,9.83451435400828,25.5104326175552,12.2735754265876,11.7589884109492,3.65921118388786,2.38553582978673,4.06678800043314,3.10983165046111,5.04641701751257,4.01475094983413,14.0804579096834,15.4377825166292,22.1015874163969,1.39310378409594,1.44375896333917,16.9178724056977,17.1956383879664,17.8348162113777,20.1837970100281,19.3912705242241,18.5071082906655,14.1572873568173,12.5581737680221,14.6203919639628,1.4763109092493,18.231430594448,5.3504621473082,11.7606969108434,0,0.982827216677626,0,0,2.09080345523293,11.3234754797027,11.4140296824971,11.240175325762,11.2592449101027,4.16648003213383,9.12263254868909,10.3993478527958,30.3095818253074,17.1576999363114,6.22266079449855,2.30986316417718,2.31492756288305,1.33177906564219,9.4824527755113,6.00940313466411,0,0.702012795417713,0.445893486866185,38.4308719345786,28.5569617938061,16.4459112801168,15.4936244275928,18.3099381263796,16.8688378832693,0.492663237895943,0.352193736052904,0.829312462163088,0,0.25248486685276,0.253991577168676,1.14596527667483,1.17217447210047,6.84289784090821,1.43958489784653,0.600686115687835,0,14.4649098805515,6.10344096366592,12.2474937320987,13.7028018703244,0,15.215449546008,9.57377219705534,11.4408180602503,19.5477604439228,51.0656875283802,24.244418290465,2.00169191121407,0,4.93944202068461,8.14340460734338,1.77695974371273,2.37585561880029,18.9906807547539,20.0452695478068,20.4944631923217,0,1.00451418286425,0,15.3359907514613,2.29723871668228,21.3955357561078,12.8855362934145,12.7395319981238,24.5313519638657,0.112085143993527,0.394061520403854,0,0,4.31960861178188,3.90419561572865,14.6924874427762,1.34013012267479,20.4140400529012,0.749007023947182,0,0,1.96306386750624,3.50119364741774,12.4781910901878,6.65506756898583,15.8801800029474,8.98903765693428,7.73133338951907,0.601892199455438,0,6.2083842775503,12.6202863721733,9.58719676416856,3.5622281931914,0.783204629850962,2.05886054286514,0,0.215714200818617,0,45.4691357169389,29.9583791118895,13.9099534931653,13.6459294300327,4.910783145218,12.0683840606222,7.04765320906355,9.72243773226737,14.1551450606375,7.42090332224955,11.1030979537912,9.41077144159573,5.66677376495283,5.71179872101983,9.06440951987682,2.65890789101569,22.6572311442712,6.35358823657685,10.5629292311438,24.2181253448934,6.16284750309293,52.7903547101672,41.4342513621751,95.6906718395763,59.9170821078369,33.987624503506,4.54933536283586,3.74206151608334,16.8414414559669,40.0990856994752,36.5777690684201,59.199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| ||
|short_description=p@chr16:3071213..3071278,+ | |short_description=p@chr16:3071213..3071278,+ | ||
}} | }} |
Latest revision as of 08:16, 25 July 2015
Short description: | p@chr16:3071213..3071278, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:3071213..3071278, + |
Coexpression cluster: | C1761_Placental_Alveolar_Smooth_Fibroblast_mesothelioma_Renal_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.48e-28 | 250 |
epithelial cell | 1.19e-27 | 253 |
mesodermal cell | 1.28e-15 | 121 |
muscle precursor cell | 1.50e-10 | 58 |
myoblast | 1.50e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.50e-10 | 58 |
electrically responsive cell | 3.90e-10 | 61 |
electrically active cell | 3.90e-10 | 61 |
kidney cell | 4.86e-10 | 17 |
kidney epithelial cell | 4.86e-10 | 17 |
epithelial cell of nephron | 5.99e-10 | 15 |
smooth muscle cell | 1.01e-09 | 43 |
smooth muscle myoblast | 1.01e-09 | 43 |
muscle cell | 1.97e-09 | 55 |
vascular associated smooth muscle cell | 6.19e-09 | 32 |
fibroblast | 7.71e-09 | 76 |
kidney tubule cell | 9.89e-09 | 10 |
nephron tubule epithelial cell | 9.89e-09 | 10 |
mesothelial cell | 5.81e-08 | 19 |
kidney cortical cell | 7.82e-08 | 12 |
renal cortical epithelial cell | 7.82e-08 | 12 |
ectodermal cell | 5.92e-07 | 72 |
endo-epithelial cell | 7.63e-07 | 42 |
squamous epithelial cell | 9.19e-07 | 63 |