FFCP PHASE1:Hg19::chr16:3068393..3068407,+: Difference between revisions
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|id=chr16:3068393..3068407,+
|short_description=p@chr16:3068393..3068407,+
|description=CAGE_peak_at_chr16:3068393..3068407,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:3068393..3068407,+ | |||
|coexpression_cluster_id=C1028 | |||
|description=CAGE_peak_at_chr16:3068393..3068407,+ | |||
|id=chr16:3068393..3068407,+ | |||
|ontology_enrichment_celltype=CL:1000449!2.26e-14!16;CL:1000507!2.40e-14!12;CL:1000494!2.40e-14!12;CL:0000064!2.47e-14!3;CL:0005012!2.47e-14!3;CL:0000067!2.47e-14!3;CL:0002304!2.47e-14!3;CL:1000497!1.15e-12!18;CL:0002518!1.15e-12!18;CL:0002319!1.47e-12!25;CL:0000242!7.23e-11!2;CL:0000133!3.96e-10!59;CL:0000047!8.24e-10!8;CL:0002322!9.73e-09!5;CL:0000221!4.92e-08!71;CL:0000540!7.50e-08!6;CL:0000031!7.50e-08!6;CL:0000404!7.50e-08!6;CL:0000066!1.35e-07!254;CL:0000322!1.92e-07!3;CL:0002605!7.09e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.44e-15;15!CL:1000497;7.99e-14;17!CL:0002518;7.99e-14;17!CL:1000507;7.67e-11;10!CL:1000494;7.67e-11;10!CL:0000322;1.53e-09;3!CL:0002681;2.77e-09;12!CL:0002584;2.77e-09;12!CL:0000083;1.49e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.44e-15,15;CL:1000497,7.99e-14,17;CL:0002518,7.99e-14,17;CL:1000507,7.67e-11,10;CL:1000494,7.67e-11,10;CL:0000322,1.30e-09,3;CL:0002681,2.89e-09,12;CL:0002584,2.89e-09,12;CL:0000083,1.49e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;3.58e-26;1!DOID:10165;3.58e-26;1!DOID:1798;3.58e-26;1!DOID:1793;1.49e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.58e-26,1;DOID:10165,3.58e-26,1;DOID:1798,3.58e-26,1;DOID:1793,1.49e-07,4 | |||
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|short_description=p@chr16:3068393..3068407,+ | |||
}} | }} |
Latest revision as of 08:15, 25 July 2015
Short description: | p@chr16:3068393..3068407, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:3068393..3068407, + |
Coexpression cluster: | C1028_Alveolar_Renal_iPS_teratocarcinoma_H9_HES3GFP_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.44e-15 | 15 |
kidney cell | 7.99e-14 | 17 |
kidney epithelial cell | 7.99e-14 | 17 |
kidney tubule cell | 7.67e-11 | 10 |
nephron tubule epithelial cell | 7.67e-11 | 10 |
pneumocyte | 1.30e-09 | 3 |
kidney cortical cell | 2.89e-09 | 12 |
renal cortical epithelial cell | 2.89e-09 | 12 |
epithelial cell of pancreas | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.44e-15 | 15 |
renal tubule | 1.44e-15 | 15 |
nephron tubule | 1.44e-15 | 15 |
nephron | 1.44e-15 | 15 |
uriniferous tubule | 1.44e-15 | 15 |
nephrogenic mesenchyme | 1.44e-15 | 15 |
excretory tube | 1.22e-14 | 16 |
kidney epithelium | 1.22e-14 | 16 |
nephron tubule epithelium | 7.67e-11 | 10 |
pulmonary alveolus epithelium | 1.30e-09 | 3 |
alveolus | 1.30e-09 | 3 |
pulmonary lobule | 1.30e-09 | 3 |
lobule | 1.30e-09 | 3 |
alveolus of lung | 1.30e-09 | 3 |
alveolar system | 1.30e-09 | 3 |
pulmonary acinus | 1.30e-09 | 3 |
alveolar sac | 1.30e-09 | 3 |
alveolar wall | 1.30e-09 | 3 |
kidney | 2.82e-09 | 26 |
kidney mesenchyme | 2.82e-09 | 26 |
upper urinary tract | 2.82e-09 | 26 |
kidney rudiment | 2.82e-09 | 26 |
kidney field | 2.82e-09 | 26 |
cortex of kidney | 2.89e-09 | 12 |
renal parenchyma | 2.89e-09 | 12 |
cavitated compound organ | 7.02e-08 | 31 |
cortex | 1.35e-07 | 15 |
parenchyma | 1.35e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.58e-26 | 1 |
endocrine pancreas cancer | 3.58e-26 | 1 |
pancreatic endocrine carcinoma | 3.58e-26 | 1 |
pancreatic cancer | 1.49e-07 | 4 |