FFCP PHASE1:Hg19::chr15:74495324..74495347,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000558645_5end | |association_with_transcript=-3bp_to_ENST00000558645_5end | ||
|cluster_id=chr15:74495324..74495347,+ | |||
|coexpression_cluster_id=C2348 | |coexpression_cluster_id=C2348 | ||
|description=CAGE_peak_2_at_ENST00000558645_5end | |description=CAGE_peak_2_at_ENST00000558645_5end | ||
|id=chr15:74495324..74495347,+ | |id=chr15:74495324..74495347,+ | ||
|ontology_enrichment_celltype=CL:0000039!3.52e-07!7;CL:0000586!3.52e-07!7 | |ontology_enrichment_celltype=CL:0000039!3.52e-07!7;CL:0000586!3.52e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.51e-11;5!CL:0002321;6.08e-11;15!CL:0000064;1.51e-08;3!CL:0000067;1.51e-08;3!CL:0005012;1.51e-08;3!CL:0002304;1.51e-08;3!CL:0002586;9.19e-08;3!CL:0000039;1.01e-07;7!CL:0000586;1.01e-07;7!CL:0000333;1.05e-07;5!CL:0000708;1.41e-07;3!CL:0000147;1.96e-07;14!CL:0000075;6.83e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.62e-11,5;CL:0000064,1.51e-08,3;CL:0000067,1.51e-08,3;CL:0005012,1.51e-08,3;CL:0002304,1.51e-08,3;CL:0002586,7.91e-08,3;CL:0000039,9.73e-08,7;CL:0000586,9.73e-08,7;CL:0000708,1.47e-07,3;CL:0000147,1.83e-07,14;CL:0000075,6.69e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.30e-11!143;DOID:3095!1.27e-09!22;DOID:2994!1.27e-09!22;DOID:162!1.13e-08!235;DOID:14566!4.68e-08!239;DOID:305!4.86e-08!106 | |ontology_enrichment_disease=DOID:0050687!5.30e-11!143;DOID:3095!1.27e-09!22;DOID:2994!1.27e-09!22;DOID:162!1.13e-08!235;DOID:14566!4.68e-08!239;DOID:305!4.86e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.19e-14;22!DOID:2994;1.19e-14;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.39e-14,22;DOID:2994,1.39e-14,22;DOID:0050687,6.41e-13,143;DOID:162,3.36e-09,235;DOID:14566,8.84e-09,239;DOID:305,9.28e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000020!1.26e-15!23;UBERON:0001032!1.15e-14!24;UBERON:0004456!1.15e-14!24;UBERON:0000970!6.57e-14!20;UBERON:0000019!4.50e-13!19;UBERON:0000047!4.50e-13!19;UBERON:0004088!4.50e-13!19;UBERON:0003072!4.50e-13!19;UBERON:0003071!4.50e-13!19;UBERON:0004128!4.50e-13!19;UBERON:0002104!6.05e-13!21;UBERON:0001456!2.85e-11!21;UBERON:0002200!4.07e-11!11;UBERON:0006876!4.07e-11!11;UBERON:0007625!2.22e-10!11;UBERON:0001801!3.14e-08!14;UBERON:0002203!1.67e-07!6;UBERON:0001768!1.67e-07!6;UBERON:0005085!2.01e-07!29;UBERON:0000966!7.59e-07!5;UBERON:0005388!7.59e-07!5;UBERON:0001802!7.59e-07!5 | |ontology_enrichment_uberon=UBERON:0000020!1.26e-15!23;UBERON:0001032!1.15e-14!24;UBERON:0004456!1.15e-14!24;UBERON:0000970!6.57e-14!20;UBERON:0000019!4.50e-13!19;UBERON:0000047!4.50e-13!19;UBERON:0004088!4.50e-13!19;UBERON:0003072!4.50e-13!19;UBERON:0003071!4.50e-13!19;UBERON:0004128!4.50e-13!19;UBERON:0002104!6.05e-13!21;UBERON:0001456!2.85e-11!21;UBERON:0002200!4.07e-11!11;UBERON:0006876!4.07e-11!11;UBERON:0007625!2.22e-10!11;UBERON:0001801!3.14e-08!14;UBERON:0002203!1.67e-07!6;UBERON:0001768!1.67e-07!6;UBERON:0005085!2.01e-07!29;UBERON:0000966!7.59e-07!5;UBERON:0005388!7.59e-07!5;UBERON:0001802!7.59e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000970;9.37e-21;20!UBERON:0007625;1.47e-20;11!UBERON:0002104;1.39e-19;21!UBERON:0000019;4.70e-19;19!UBERON:0000047;4.70e-19;19!UBERON:0004088;4.70e-19;19!UBERON:0010230;4.70e-19;19!UBERON:0000020;1.50e-17;23!UBERON:0001456;6.57e-17;21!UBERON:0001032;1.16e-16;24!UBERON:0004456;1.16e-16;24!UBERON:0006876;4.59e-13;11!UBERON:0000966;1.45e-12;5!UBERON:0005388;1.45e-12;5!UBERON:0001802;1.45e-12;5!UBERON:0000488;6.55e-11;4!UBERON:0002203;1.63e-10;6!UBERON:0001768;1.63e-10;6!UBERON:0002200;1.63e-10;6!UBERON:0001801;6.16e-10;14!UBERON:0001778;1.51e-08;3!UBERON:0001775;1.51e-08;3!UBERON:0010371;3.43e-08;31!UBERON:0001781;9.19e-08;3!UBERON:0001782;9.19e-08;3!UBERON:0000013;1.05e-07;5!UBERON:0002410;1.05e-07;5!UBERON:0003210;1.41e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.26e-20,11;UBERON:0000970,1.39e-19,21;UBERON:0002104,1.39e-19,21;UBERON:0000019,5.79e-18,20;UBERON:0000047,5.79e-18,20;UBERON:0010312,5.79e-18,20;UBERON:0004088,5.79e-18,20;UBERON:0010230,5.79e-18,20;UBERON:0003072,5.79e-18,20;UBERON:0004128,5.79e-18,20;UBERON:0003071,5.79e-18,20;UBERON:0000020,1.17e-16,24;UBERON:0001032,1.17e-16,24;UBERON:0004456,1.17e-16,24;UBERON:0001456,5.13e-16,22;UBERON:0006876,4.21e-13,11;UBERON:0000488,6.56e-11,4;UBERON:0002203,1.70e-10,6;UBERON:0001768,1.70e-10,6;UBERON:0002200,1.70e-10,6;UBERON:0000966,1.91e-10,6;UBERON:0005388,1.91e-10,6;UBERON:0001802,1.91e-10,6;UBERON:0005085,2.13e-10,31;UBERON:0001801,6.24e-10,14;UBERON:0001778,1.51e-08,3;UBERON:0001775,1.51e-08,3;UBERON:0001782,7.91e-08,3;UBERON:0005424,7.91e-08,3;UBERON:0000013,1.15e-07,5;UBERON:0002410,1.15e-07,5;UBERON:0003210,1.47e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0.791300934685361,0.123766352960047,0,0,0,0,0,0.492484232307152,0,0.313454721478088,0,0.273748850145768,0,0,0.164201178899891,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.16987726491458,9.97782288581538,8.51997421223323,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23800797405808,6.33793516927999,1.40592859100278,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,3.17131635936948,3.44577397635862,4.4153698290417,2.28054321033815,4.28945446488568,6.56959246336494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,12.8675857723894,0,0,0,0,0.651616610620649,0,5.77325368101093,2.89826012437692,3.05262605013136,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,2.46688385559794,8.28324130783232,2.0534720029866,0,0,0,1.32969058292435,1.04007436911366,0,0,0,0,0,1.64648067356154,0,0,0.791951872933429,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,1.00034104211935,0.813795071099207,0,0.178428988797162,0,0,0,0,0,0,0,0,3.52442083432933,3.0882908142977,0,0,0,1.5156378572313,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0.0920809889358963,0.803701137152247,0.910455840033585,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,6.15480300279334,3.93617574839647,3.57916234130733,0.206082023295445,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0,0,0.580066775656914,0.0852266274161009,0,0.495854746082934,0.384380134730212,0.382838137483752,0,0,0,0,0,0,0,0,0,1.86079184679834,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.709522128141196,0,0,0.75894634753143,2.0996083214699,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,1.81600920916704,0,0,0,0,1.63626239701352,0.478278818186467,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,5.01495229248653,0,0,0,0,0,0,0,0,5.48926061132783,0,0,1.0077309914171,0,0.246169610922139,0,0.718946809178615,6.44476228832193,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,2.61724931056649,3.81380475439149,1.89110145414349,14.4792216761415,0,0.347249989866585,0,0,0,0,0,0.438770794307945,0,0,0.538651809526579,0,6.45578932286568,2.2439411102443,3.80265801727028,0,0.732780747214898,0,0,0,0,0,0.19606253431774,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0.971121518136371,0.394584402849391,0,0,0.31593289814244,0,0.311064574191741,8.64050034519341,9.59876672038947,9.41798755221676,5.97362148864794,0,0,0,1.37189356380129,0,0.34945333648406,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0.0969890164884194,1.588610280447,2.03382666702479,0,0.19871461170299,0.0633107959558787,0.782205530939212,0.0801588202515337,0,13.1874342324206,0.288180834308212,0,0.171594997861965,0,0,0,0,0.104602846312333,0.815985741090574,0,0,0,0,0,3.41753560563109,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0,0.0984274815147488,4.40301326742079,0,0,2.08979093004525,0.962776056180637,0,0,0,0,0,0.0788057072991982,0.83927341015997,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,3.05942647104339,0,0,0.258565912723101,0,1.36869470307464,0,0,0,0,0,0,0,5.10673006216145,0,0,0,0,0.471162288750703,0,0,0,0,0,0,13.2814689538782,0.249960815924213,0.758245587708239,0,4.70531639396343,7.96169339871699,2.60857851499485,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,1.04349012362347,0.150257608997218,0,0,0,0.322231671127465,0,0.796191777397232,0,0,0,0,0,0,0,0.226705925512272,0,0,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22051425302051,9.27293378011463,3.93164854639741,1.09209638192014,2.0367903594483,0,0.371807292777007,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0.0691572524642179,0,0,2.45369296252564,0,0.183428598521679,0.924205329202706,0,0,0,0.150420656698515,0,0,0.785720083444267,0,10.6456382076273,0.0675375846183947,0,0,0.126831620387814,0.546974809018219,0,0,0,8.68784507949248,35.8920230038452,21.1858744997859,0.606965604236632,0,0.975726071789027,0,0,0,0,0,0,0.313972371402056,0,0.280272163313789,0,0,0,14.5812150120379,15.8013611732727,8.13689977576877,0.869291361512897,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,0,0.485710993059139,0,17.9055697645231,0,0.11294608203896,11.8735758085063,0,0,0.437119121007915,0,0,0,0,0,0.8453114551668,0,0,0,0,4.99951028095841,0,0,0,0,0,0.631086248772738,0.135982980381829,0,0,0,0,0,3.28032704571205,7.3207933215676,6.08152804854898,1.52983244612973,1.3360870263278,0.918948995348449,0.2507075392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| ||
|short_description=p2@ENST00000558645 | |short_description=p2@ENST00000558645 | ||
}} | }} |
Latest revision as of 04:09, 25 July 2015
Short description: | p2@ENST00000558645 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000558645_5end |
Coexpression cluster: | C2348_gastric_Iris_retina_papillotubular_neuroblastoma_Ciliary_embryonic |
Association with transcript: | -3bp_to_ENST00000558645_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.62e-11 | 5 |
ciliated cell | 1.51e-08 | 3 |
ciliated epithelial cell | 1.51e-08 | 3 |
multi-ciliated epithelial cell | 1.51e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.51e-08 | 3 |
retinal pigment epithelial cell | 7.91e-08 | 3 |
germ line cell | 9.73e-08 | 7 |
germ cell | 9.73e-08 | 7 |
leptomeningeal cell | 1.47e-07 | 3 |
pigment cell | 1.83e-07 | 14 |
columnar/cuboidal epithelial cell | 6.69e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 1.26e-20 | 11 |
eye | 1.39e-19 | 21 |
visual system | 1.39e-19 | 21 |
camera-type eye | 5.79e-18 | 20 |
simple eye | 5.79e-18 | 20 |
immature eye | 5.79e-18 | 20 |
ocular region | 5.79e-18 | 20 |
eyeball of camera-type eye | 5.79e-18 | 20 |
optic cup | 5.79e-18 | 20 |
optic vesicle | 5.79e-18 | 20 |
eye primordium | 5.79e-18 | 20 |
sense organ | 1.17e-16 | 24 |
sensory system | 1.17e-16 | 24 |
entire sense organ system | 1.17e-16 | 24 |
face | 5.13e-16 | 22 |
vasculature of organ | 4.21e-13 | 11 |
atypical epithelium | 6.56e-11 | 4 |
vasculature of eye | 1.70e-10 | 6 |
uvea | 1.70e-10 | 6 |
vasculature of head | 1.70e-10 | 6 |
retina | 1.91e-10 | 6 |
photoreceptor array | 1.91e-10 | 6 |
posterior segment of eyeball | 1.91e-10 | 6 |
ectodermal placode | 2.13e-10 | 31 |
anterior segment of eyeball | 6.24e-10 | 14 |
ciliary epithelium | 1.51e-08 | 3 |
ciliary body | 1.51e-08 | 3 |
pigmented layer of retina | 7.91e-08 | 3 |
presumptive retinal pigmented epithelium | 7.91e-08 | 3 |
sympathetic nervous system | 1.15e-07 | 5 |
autonomic nervous system | 1.15e-07 | 5 |
blood-cerebrospinal fluid barrier | 1.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.39e-14 | 22 |
germ cell cancer | 1.39e-14 | 22 |
cell type cancer | 6.41e-13 | 143 |
cancer | 3.36e-09 | 235 |
disease of cellular proliferation | 8.84e-09 | 239 |
carcinoma | 9.28e-08 | 106 |