FFCP PHASE1:Hg19::chr15:45734062..45734081,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-56bp_to_ENST00000559553_5end | |association_with_transcript=-56bp_to_ENST00000559553_5end | ||
|cluster_id=chr15:45734062..45734081,- | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_1_at_ENST00000559553_5end | |description=CAGE_peak_1_at_ENST00000559553_5end | ||
|id=chr15:45734062..45734081,- | |id=chr15:45734062..45734081,- | ||
|ontology_enrichment_celltype=CL:1000507!1.23e-16!12;CL:1000494!1.23e-16!12;CL:1000497!1.78e-13!18;CL:0002518!1.78e-13!18;CL:1000449!4.18e-12!16 | |ontology_enrichment_celltype=CL:1000507!1.23e-16!12;CL:1000494!1.23e-16!12;CL:1000497!1.78e-13!18;CL:0002518!1.78e-13!18;CL:1000449!4.18e-12!16 | ||
|ontology_enrichment_celltype_v019=CL:1000507;7.09e-17;10!CL:1000494;7.09e-17;10!CL:1000449;1.79e-11;15!CL:1000497;3.39e-10;17!CL:0002518;3.39e-10;17!CL:0000322;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,6.90e-17,10;CL:1000494,6.90e-17,10;CL:1000449,1.76e-11,15;CL:1000497,3.34e-10,17;CL:0002518,3.34e-10,17;CL:0000322,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.06e-19;1!UBERON:0010227;3.91e-19;1 | |||
|ontology_enrichment_disease=DOID:4468!6.65e-08!2 | |ontology_enrichment_disease=DOID:4468!6.65e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:4468;1.72e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.72e-10,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001155;1.55e-32;9!UBERON:0000059;1.02e-26;11!UBERON:0001154;2.06e-19;1!UBERON:0001153;2.06e-19;1!UBERON:0009854;2.06e-19;1!UBERON:0002079;3.91e-19;1!UBERON:0009856;6.47e-19;4!UBERON:0004211;7.09e-17;10!UBERON:0009773;7.09e-17;10!UBERON:0001231;7.09e-17;10!UBERON:0004810;7.09e-17;10!UBERON:0000160;1.66e-16;17!UBERON:0005409;5.31e-13;22!UBERON:0006555;1.79e-11;15!UBERON:0004819;1.79e-11;15!UBERON:0001285;1.79e-11;15!UBERON:0007684;1.79e-11;15!UBERON:0002081;2.99e-10;2!UBERON:0004921;7.52e-09;33!UBERON:0002113;2.18e-07;24!UBERON:0011143;2.18e-07;24!UBERON:0004821;2.97e-07;3!UBERON:0007499;2.97e-07;3!UBERON:0004151;2.97e-07;3!UBERON:0003215;2.97e-07;3!UBERON:0010368;2.97e-07;3!UBERON:0009911;2.97e-07;3!UBERON:0002299;2.97e-07;3!UBERON:0006524;2.97e-07;3!UBERON:0008874;2.97e-07;3!UBERON:0002169;2.97e-07;3!UBERON:0004894;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,1.37e-32,9;UBERON:0000059,9.24e-27,11;UBERON:0001154,2.25e-19,1;UBERON:0001153,2.25e-19,1;UBERON:0001045,2.25e-19,1;UBERON:0002079,4.69e-19,1;UBERON:0004810,6.90e-17,10;UBERON:0000160,1.57e-16,17;UBERON:0005409,1.47e-11,25;UBERON:0004211,1.76e-11,15;UBERON:0009773,1.76e-11,15;UBERON:0001231,1.76e-11,15;UBERON:0001285,1.76e-11,15;UBERON:0007684,1.76e-11,15;UBERON:0004208,1.76e-11,15;UBERON:0006555,8.39e-11,16;UBERON:0004819,8.39e-11,16;UBERON:0002081,3.27e-10,2;UBERON:0010227,3.27e-10,2;UBERON:0004821,2.79e-07,3;UBERON:0003215,2.79e-07,3;UBERON:0010368,2.79e-07,3;UBERON:0009911,2.79e-07,3;UBERON:0002299,2.79e-07,3;UBERON:0006524,2.79e-07,3;UBERON:0008874,2.79e-07,3;UBERON:0002169,2.79e-07,3;UBERON:0004894,2.79e-07,3;UBERON:0004151,3.16e-07,3;UBERON:0002113,7.26e-07,26;UBERON:0003918,7.26e-07,26;UBERON:0011143,7.26e-07,26;UBERON:0005095,7.26e-07,26;UBERON:0007687,7.26e-07,26 | |||
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| ||
|short_description=p1@ENST00000559553 | |short_description=p1@ENST00000559553 | ||
}} | }} |
Latest revision as of 02:01, 25 July 2015
Short description: | p1@ENST00000559553 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000559553_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | -56bp_to_ENST00000559553_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.90e-17 | 10 |
nephron tubule epithelial cell | 6.90e-17 | 10 |
epithelial cell of nephron | 1.76e-11 | 15 |
kidney cell | 3.34e-10 | 17 |
kidney epithelial cell | 3.34e-10 | 17 |
pneumocyte | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
colon | 1.37e-32 | 9 |
large intestine | 9.24e-27 | 11 |
vermiform appendix | 2.25e-19 | 1 |
caecum | 2.25e-19 | 1 |
midgut | 2.25e-19 | 1 |
left cardiac atrium | 4.69e-19 | 1 |
nephron tubule epithelium | 6.90e-17 | 10 |
intestine | 1.57e-16 | 17 |
gastrointestinal system | 1.47e-11 | 25 |
nephron epithelium | 1.76e-11 | 15 |
renal tubule | 1.76e-11 | 15 |
nephron tubule | 1.76e-11 | 15 |
nephron | 1.76e-11 | 15 |
uriniferous tubule | 1.76e-11 | 15 |
nephrogenic mesenchyme | 1.76e-11 | 15 |
excretory tube | 8.39e-11 | 16 |
kidney epithelium | 8.39e-11 | 16 |
cardiac atrium | 3.27e-10 | 2 |
future cardiac atrium | 3.27e-10 | 2 |
pulmonary alveolus epithelium | 2.79e-07 | 3 |
alveolus | 2.79e-07 | 3 |
pulmonary lobule | 2.79e-07 | 3 |
lobule | 2.79e-07 | 3 |
alveolus of lung | 2.79e-07 | 3 |
alveolar system | 2.79e-07 | 3 |
pulmonary acinus | 2.79e-07 | 3 |
alveolar sac | 2.79e-07 | 3 |
alveolar wall | 2.79e-07 | 3 |
cardiac chamber | 3.16e-07 | 3 |
kidney | 7.26e-07 | 26 |
kidney mesenchyme | 7.26e-07 | 26 |
upper urinary tract | 7.26e-07 | 26 |
kidney rudiment | 7.26e-07 | 26 |
kidney field | 7.26e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.72e-10 | 2 |