FFCP PHASE1:Hg19::chr15:39874624..39874636,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39874624..39874636,+ | |||
|coexpression_cluster_id=C142 | |coexpression_cluster_id=C142 | ||
|description=CAGE_peak_at_chr15:39874624..39874636,+ | |description=CAGE_peak_at_chr15:39874624..39874636,+ | ||
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|ontology_enrichment_celltype=CL:0000055!3.28e-22!180;CL:0002371!9.00e-21!591;CL:0000057!1.22e-20!75;CL:0000144!2.66e-18!625;CL:0000222!3.03e-16!119;CL:0000548!1.68e-15!679;CL:0000004!1.68e-15!679;CL:0000255!1.68e-15!679;CL:0000012!5.22e-15!682;CL:0002139!1.84e-13!24;CL:0000220!2.59e-13!246;CL:0002321!6.78e-13!248;CL:0000115!2.48e-12!35;CL:0000071!3.94e-10!18;CL:0002546!3.94e-10!18;CL:0002078!1.73e-09!44;CL:0000003!1.76e-09!722;CL:0000723!2.70e-09!436;CL:0000048!3.37e-09!430;CL:0000359!4.80e-09!32;CL:0000213!7.01e-09!57;CL:0000215!7.01e-09!57;CL:0000680!7.70e-09!57;CL:0000056!7.70e-09!57;CL:0000355!7.70e-09!57;CL:0000192!1.23e-08!42;CL:0000514!1.23e-08!42;CL:0000187!1.97e-08!54;CL:0000034!2.94e-08!444;CL:0000183!8.46e-08!59;CL:0002334!8.73e-08!12;CL:0000063!1.23e-07!578;CL:0000393!2.28e-07!60;CL:0000211!2.28e-07!60;CL:1000413!6.04e-07!9;CL:0002620!8.32e-07!23 | |ontology_enrichment_celltype=CL:0000055!3.28e-22!180;CL:0002371!9.00e-21!591;CL:0000057!1.22e-20!75;CL:0000144!2.66e-18!625;CL:0000222!3.03e-16!119;CL:0000548!1.68e-15!679;CL:0000004!1.68e-15!679;CL:0000255!1.68e-15!679;CL:0000012!5.22e-15!682;CL:0002139!1.84e-13!24;CL:0000220!2.59e-13!246;CL:0002321!6.78e-13!248;CL:0000115!2.48e-12!35;CL:0000071!3.94e-10!18;CL:0002546!3.94e-10!18;CL:0002078!1.73e-09!44;CL:0000003!1.76e-09!722;CL:0000723!2.70e-09!436;CL:0000048!3.37e-09!430;CL:0000359!4.80e-09!32;CL:0000213!7.01e-09!57;CL:0000215!7.01e-09!57;CL:0000680!7.70e-09!57;CL:0000056!7.70e-09!57;CL:0000355!7.70e-09!57;CL:0000192!1.23e-08!42;CL:0000514!1.23e-08!42;CL:0000187!1.97e-08!54;CL:0000034!2.94e-08!444;CL:0000183!8.46e-08!59;CL:0002334!8.73e-08!12;CL:0000063!1.23e-07!578;CL:0000393!2.28e-07!60;CL:0000211!2.28e-07!60;CL:1000413!6.04e-07!9;CL:0002620!8.32e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.21e-19;24!CL:0000115;2.62e-15;36!CL:0000071;4.24e-15;18!CL:0002078;5.39e-09;45!CL:1000413;5.44e-09;9!CL:0000359;1.89e-08;32!CL:0002544;8.10e-08;6!CL:0002559;1.65e-07;5!CL:0000057;3.59e-07;73!CL:0002620;4.16e-07;23!CL:0002334;5.59e-07;12 | |ontology_enrichment_celltype_v019=CL:0002139;4.21e-19;24!CL:0000115;2.62e-15;36!CL:0000071;4.24e-15;18!CL:0002078;5.39e-09;45!CL:1000413;5.44e-09;9!CL:0000359;1.89e-08;32!CL:0002544;8.10e-08;6!CL:0002559;1.65e-07;5!CL:0000057;3.59e-07;73!CL:0002620;4.16e-07;23!CL:0002334;5.59e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.25e-19,24;CL:0000057,4.18e-19,76;CL:0000115,2.88e-18,36;CL:0000071,4.07e-15,18;CL:0002546,4.07e-15,18;CL:0002078,4.91e-13,45;CL:0000213,1.71e-10,58;CL:0000215,1.71e-10,58;CL:0000222,3.00e-10,121;CL:1000413,5.07e-09,9;CL:0000359,8.53e-09,32;CL:0000136,3.72e-08,15;CL:0002544,7.59e-08,6;CL:0002559,1.75e-07,5;CL:0000048,2.19e-07,427;CL:0002620,2.88e-07,23;CL:0002334,4.23e-07,12;CL:0002321,5.19e-07,250;CL:0000723,5.75e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002546;4.24e-15;18 | |ontology_enrichment_development_v019=CL:0002546;4.24e-15;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;6.59e-07;5!DOID:450;6.59e-07;5!DOID:66;6.59e-07;5!DOID:423;6.59e-07;5!DOID:0080000;6.59e-07;5!DOID:11722;6.59e-07;5 | |ontology_enrichment_disease_v019=DOID:17;6.59e-07;5!DOID:450;6.59e-07;5!DOID:66;6.59e-07;5!DOID:423;6.59e-07;5!DOID:0080000;6.59e-07;5!DOID:11722;6.59e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,2.95e-07,5;DOID:450,2.95e-07,5;DOID:66,2.95e-07,5;DOID:423,2.95e-07,5;DOID:0080000,2.95e-07,5;DOID:11722,2.95e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!3.75e-22!69;UBERON:0002049!6.30e-22!79;UBERON:0007798!6.30e-22!79;UBERON:0001981!6.44e-21!60;UBERON:0007500!6.44e-21!60;UBERON:0004537!6.44e-21!60;UBERON:0006965!6.44e-21!60;UBERON:0004872!7.07e-20!84;UBERON:0001637!1.49e-17!42;UBERON:0003509!1.49e-17!42;UBERON:0004572!1.49e-17!42;UBERON:0001009!2.15e-16!113;UBERON:0004535!2.41e-16!110;UBERON:0004573!5.31e-14!33;UBERON:0004571!5.31e-14!33;UBERON:0003914!1.15e-13!118;UBERON:0000490!1.76e-12!138;UBERON:0000914!2.75e-11!83;UBERON:0002329!2.75e-11!83;UBERON:0003077!2.75e-11!83;UBERON:0003059!2.75e-11!83;UBERON:0007282!2.75e-11!83;UBERON:0009618!2.75e-11!83;UBERON:0007285!2.75e-11!83;UBERON:0001986!3.94e-10!18;UBERON:0004638!3.94e-10!18;UBERON:0004852!3.94e-10!18;UBERON:0003102!5.49e-10!95;UBERON:0000467!5.77e-10!625;UBERON:0000468!6.66e-10!659;UBERON:0000480!7.86e-10!626;UBERON:0002199!8.20e-10!45;UBERON:0002416!8.20e-10!45;UBERON:0000487!3.04e-09!22;UBERON:0002100!3.41e-09!216;UBERON:0000926!5.14e-09!448;UBERON:0004120!5.14e-09!448;UBERON:0006603!5.14e-09!448;UBERON:0005256!1.02e-08!143;UBERON:0000947!1.15e-08!21;UBERON:0010191!1.15e-08!21;UBERON:0004290!2.26e-08!70;UBERON:0006914!3.81e-08!25;UBERON:0000486!6.13e-08!82;UBERON:0002097!7.84e-08!40;UBERON:0001134!1.93e-07!61;UBERON:0002036!1.93e-07!61;UBERON:0003082!1.93e-07!61;UBERON:0002385!2.97e-07!63;UBERON:0001015!2.97e-07!63;UBERON:0000383!2.97e-07!63;UBERON:0003915!6.04e-07!9;UBERON:0004700!6.04e-07!9;UBERON:0001917!6.04e-07!9 | |ontology_enrichment_uberon=UBERON:0000055!3.75e-22!69;UBERON:0002049!6.30e-22!79;UBERON:0007798!6.30e-22!79;UBERON:0001981!6.44e-21!60;UBERON:0007500!6.44e-21!60;UBERON:0004537!6.44e-21!60;UBERON:0006965!6.44e-21!60;UBERON:0004872!7.07e-20!84;UBERON:0001637!1.49e-17!42;UBERON:0003509!1.49e-17!42;UBERON:0004572!1.49e-17!42;UBERON:0001009!2.15e-16!113;UBERON:0004535!2.41e-16!110;UBERON:0004573!5.31e-14!33;UBERON:0004571!5.31e-14!33;UBERON:0003914!1.15e-13!118;UBERON:0000490!1.76e-12!138;UBERON:0000914!2.75e-11!83;UBERON:0002329!2.75e-11!83;UBERON:0003077!2.75e-11!83;UBERON:0003059!2.75e-11!83;UBERON:0007282!2.75e-11!83;UBERON:0009618!2.75e-11!83;UBERON:0007285!2.75e-11!83;UBERON:0001986!3.94e-10!18;UBERON:0004638!3.94e-10!18;UBERON:0004852!3.94e-10!18;UBERON:0003102!5.49e-10!95;UBERON:0000467!5.77e-10!625;UBERON:0000468!6.66e-10!659;UBERON:0000480!7.86e-10!626;UBERON:0002199!8.20e-10!45;UBERON:0002416!8.20e-10!45;UBERON:0000487!3.04e-09!22;UBERON:0002100!3.41e-09!216;UBERON:0000926!5.14e-09!448;UBERON:0004120!5.14e-09!448;UBERON:0006603!5.14e-09!448;UBERON:0005256!1.02e-08!143;UBERON:0000947!1.15e-08!21;UBERON:0010191!1.15e-08!21;UBERON:0004290!2.26e-08!70;UBERON:0006914!3.81e-08!25;UBERON:0000486!6.13e-08!82;UBERON:0002097!7.84e-08!40;UBERON:0001134!1.93e-07!61;UBERON:0002036!1.93e-07!61;UBERON:0003082!1.93e-07!61;UBERON:0002385!2.97e-07!63;UBERON:0001015!2.97e-07!63;UBERON:0000383!2.97e-07!63;UBERON:0003915!6.04e-07!9;UBERON:0004700!6.04e-07!9;UBERON:0001917!6.04e-07!9 | ||
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|short_description=p@chr15:39874624..39874636,+ | |short_description=p@chr15:39874624..39874636,+ | ||
}} | }} |
Latest revision as of 01:13, 25 July 2015
Short description: | p@chr15:39874624..39874636, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39874624..39874636, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.25e-19 | 24 |
fibroblast | 4.18e-19 | 76 |
endothelial cell | 2.88e-18 | 36 |
blood vessel endothelial cell | 4.07e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.07e-15 | 18 |
meso-epithelial cell | 4.91e-13 | 45 |
lining cell | 1.71e-10 | 58 |
barrier cell | 1.71e-10 | 58 |
mesodermal cell | 3.00e-10 | 121 |
endothelial cell of artery | 5.07e-09 | 9 |
vascular associated smooth muscle cell | 8.53e-09 | 32 |
fat cell | 3.72e-08 | 15 |
aortic endothelial cell | 7.59e-08 | 6 |
hair follicle cell | 1.75e-07 | 5 |
multi fate stem cell | 2.19e-07 | 427 |
skin fibroblast | 2.88e-07 | 23 |
preadipocyte | 4.23e-07 | 12 |
embryonic cell | 5.19e-07 | 250 |
somatic stem cell | 5.75e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.95e-07 | 5 |
myotonic disease | 2.95e-07 | 5 |
muscle tissue disease | 2.95e-07 | 5 |
myopathy | 2.95e-07 | 5 |
muscular disease | 2.95e-07 | 5 |
myotonic dystrophy | 2.95e-07 | 5 |