FFCP PHASE1:Hg19::chr14:64579753..64579770,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:64579753..64579770,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr14:64579753..64579770,+ | |||
|id=chr14:64579753..64579770,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.96e-14!43;CL:0000223!1.63e-11!59;CL:0002368!2.16e-09!13;CL:0000066!6.95e-08!254;CL:0000622!6.39e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.02e-14;13!CL:0002076;8.35e-12;42!CL:0002202;1.69e-07;9!CL:0002632;1.69e-07;9!CL:0002621;3.25e-07;3!CL:0000622;5.93e-07;5!CL:0000307;9.67e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.05e-16,42;CL:0000223,1.26e-14,58;CL:0002368,3.13e-14,13;CL:0000066,2.53e-08,253;CL:0002202,1.73e-07,9;CL:0002632,1.73e-07,9;CL:0002621,3.39e-07,3;CL:0000622,5.45e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.35e-10;29!CL:0000223;3.61e-09;58!CL:0000377;9.67e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.14e-23!72;UBERON:0004119!3.24e-20!169;UBERON:0000925!3.24e-20!169;UBERON:0006595!3.24e-20!169;UBERON:0001007!5.05e-19!155;UBERON:0001555!5.05e-19!155;UBERON:0007026!5.05e-19!155;UBERON:0004921!1.81e-18!129;UBERON:0004185!1.81e-18!129;UBERON:0000065!4.93e-18!53;UBERON:0001041!5.07e-18!98;UBERON:0000077!7.33e-15!130;UBERON:0008947!7.34e-14!38;UBERON:0003258!7.34e-14!38;UBERON:0000481!2.26e-12!347;UBERON:0007023!4.56e-12!115;UBERON:0000072!7.38e-12!46;UBERON:0001737!7.80e-12!9;UBERON:0001557!1.38e-10!19;UBERON:0003104!1.17e-09!238;UBERON:0009142!1.17e-09!238;UBERON:0000062!1.25e-08!511;UBERON:0001048!1.44e-08!168;UBERON:0001044!2.31e-08!6;UBERON:0003293!2.31e-08!6;UBERON:0003294!2.31e-08!6;UBERON:0010047!2.31e-08!6;UBERON:0000167!2.31e-08!6;UBERON:0000166!3.32e-08!21;UBERON:0000466!4.07e-08!126;UBERON:0005181!2.59e-07!35;UBERON:0000063!3.44e-07!97;UBERON:0003408!3.81e-07!10;UBERON:0005911!3.94e-07!82;UBERON:0002365!9.95e-07!31;UBERON:0002330!9.95e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.41e-17;9!UBERON:0001557;2.41e-17;9!UBERON:0000065;6.58e-17;44!UBERON:0001004;6.41e-13;65!UBERON:0000072;7.40e-11;37!UBERON:0001044;5.10e-09;6!UBERON:0003293;5.10e-09;6!UBERON:0003294;5.10e-09;6!UBERON:0010047;5.10e-09;6!UBERON:0003408;5.10e-09;6!UBERON:0000167;5.10e-09;6!UBERON:0002365;5.70e-09;31!UBERON:0002330;5.70e-09;31!UBERON:0000165;4.74e-08;28!UBERON:0011135;1.21e-07;5!UBERON:0002216;1.21e-07;5!UBERON:0011134;1.21e-07;5!UBERON:0002209;1.21e-07;5!UBERON:0002213;1.21e-07;5!UBERON:0007844;1.21e-07;5!UBERON:0011138;1.21e-07;5!UBERON:0001130;1.21e-07;5!UBERON:0001066;1.21e-07;5!UBERON:0001468;1.21e-07;5!UBERON:0000161;1.96e-07;19!UBERON:0000166;1.96e-07;19!UBERON:0001949;3.25e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.04e-26,74;UBERON:0001041,7.22e-21,87;UBERON:0004119,1.41e-20,160;UBERON:0000925,1.41e-20,160;UBERON:0006595,1.41e-20,160;UBERON:0000065,4.61e-20,54;UBERON:0001007,2.98e-19,145;UBERON:0001555,2.98e-19,145;UBERON:0007026,2.98e-19,145;UBERON:0004921,1.35e-18,118;UBERON:0001737,2.63e-17,9;UBERON:0008947,4.40e-16,38;UBERON:0003258,4.40e-16,38;UBERON:0001557,9.28e-13,19;UBERON:0000072,8.05e-12,47;UBERON:0000166,3.14e-09,22;UBERON:0001044,4.54e-09,6;UBERON:0003293,4.54e-09,6;UBERON:0003294,4.54e-09,6;UBERON:0010047,4.54e-09,6;UBERON:0000167,4.54e-09,6;UBERON:0002365,5.50e-09,31;UBERON:0002330,5.50e-09,31;UBERON:0011216,1.49e-08,223;UBERON:0001048,1.98e-08,160;UBERON:0002530,5.44e-08,59;UBERON:0000165,9.28e-08,29;UBERON:0000930,9.28e-08,29;UBERON:0011135,1.37e-07,5;UBERON:0002216,1.37e-07,5;UBERON:0011134,1.37e-07,5;UBERON:0002209,1.37e-07,5;UBERON:0002213,1.37e-07,5;UBERON:0005856,1.37e-07,5;UBERON:0005866,1.37e-07,5;UBERON:0005863,1.37e-07,5;UBERON:0007844,1.37e-07,5;UBERON:0011138,1.37e-07,5;UBERON:0001130,1.37e-07,5;UBERON:0001066,1.37e-07,5;UBERON:0001468,1.37e-07,5;UBERON:0001949,3.39e-07,3;UBERON:0007023,5.27e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,13.8618315315252,30.4885585669683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,2.10844143144775,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,3.27865759463288,5.56176664176644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95739071387869,2.18196896472668,6.02289650316908,0,0,0,0,0,0,0,0,0,0,0,2.36613600079688,3.70886318171824,2.16909926895134,3.08823123650703,3.4860711054785,3.08451804844426,3.91010793664477,5.101758093259,3.46272441251751,0,0,0,0,45.6318125358591,66.8322507340786,88.6184860022106,0,3.44367627920718,0,0.658501712451753,0,0,4.25906847729236,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.708875486211932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,19.9987131502198,2.00068208423871,0.813795071099207,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,1.38121483403844,0,0,0,0,0.847168708148562,0,0,0.105551628892876,0,0,0,0,0,0,1.27438136522519,0.831076008928724,0,0,0,0,0,0,8.86152700170411,0,0,5.74265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,5.61968712227326,3.45942121257191,15.951589061823,4.046311234222,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61866141082458,2.01090682660736,2.17781969722645,6.68420985515132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,1.90460633053462,0,0,0,1.67121139316383,0,3.07160702099232,0,0.140669416410513,0,0,0,2.98871982376605,0.276283915531148,0,0,0,0,0.0898683511473268,20.9454774370463,0,0,0,0,0,0,0,0,0,0,0.910347586283997,0,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,0,0,1.07730361905316,0,0,0,0,0.957003479195758,0.457987967009312,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,2.74218449960351,0,0,0,0,0.067401132980677,5.61804353109152,0,0,0,0,0.789168805698781,0,0,0.063186579628488,0,0,0,0,0,0,0,0,1.04135843001079,0,15.0612427384096,1.57254001417827,0,1.64485763191445,1.75414361006845,1.39596276990456,1.16386819786103,0,1.35588444468319,0,0,0,0,0,0.426905989478705,0,0,0,0,1.58460277786965,0,8.48498524620464,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.599037001496973,0,0.89268582976749,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,4.72834243795189,0.577000469484979,0,0.717149357331379,0,1.42939065274673,2.64836788146173,0,0,0,0,0,0,0,0,116.655578007754,9.27548222385549,0,0,0,0,3.20362237703084,6.4453765090863,1.24271716604159,0,0,0.243585196761792,0,0.544017803369474,0.5013797880454,0,0.655745261419609,0,0,0,0,0,2.10765197920019,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0.506827321959218,0,0,0,0,0,0,0,0,12.5344183464397,0.211312123358627,0,0,0,0,0,13.848071264225,4.97661808026378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0.0752103283492573,0,14.8487662134288,0,0,0.295712172434091,0,0,0,0,0,5.48257766857182,2.48105589194647,0,0,0,0,2.42786241694653,1.82129753081038,0.975726071789027,0,0,0,0,0,0,1.33438257845874,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0.414432328326074,3.7558064960669,6.91259661814092,4.30227358820278,0,0,0,0.4582137370881,28.2287810954531,9.55538938977433,0.782988022584546,0,0,5.17943069750316,77.4077563696103,2.3196288626764,1.45713297917742,0,0,0,0,0,1.20770274853339,1.69783147837478,0.874238242015829,2.82190377816914,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,1.42843150884526,0,0,0,3.66983426723633,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,3.83821167421766,2.3806443146374,0.0645889098360061,0.124149428591716,0,3.24600507218641,7.68045318041233,1.52401723527873,2.73786640868225,1.88585748440845,8.10460920937243,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0.320568492303233 | |||
|short_description=p@chr14:64579753..64579770,+ | |||
}} |
Latest revision as of 21:50, 24 July 2015
Short description: | p@chr14:64579753..64579770, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:64579753..64579770, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.05e-16 | 42 |
endodermal cell | 1.26e-14 | 58 |
respiratory epithelial cell | 3.13e-14 | 13 |
epithelial cell | 2.53e-08 | 253 |
epithelial cell of tracheobronchial tree | 1.73e-07 | 9 |
epithelial cell of lower respiratory tract | 1.73e-07 | 9 |
gingival epithelial cell | 3.39e-07 | 3 |
acinar cell | 5.45e-07 | 5 |