FFCP PHASE1:Hg19::chr14:62394455..62394466,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:62394455..62394466,+ | |||
|coexpression_cluster_id=C1729 | |||
|description=CAGE_peak_at_chr14:62394455..62394466,+ | |||
|id=chr14:62394455..62394466,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.45e-10!254;CL:0002537!6.75e-10!5;CL:0002541!1.39e-09!3;CL:0000349!1.79e-09!3;CL:0002577!1.79e-09!3;CL:0002621!6.88e-09!3;CL:0002251!6.45e-07!21;CL:0002536!7.26e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.30e-38;19!CL:0002577;2.28e-21;3!CL:0002541;4.45e-21;3!CL:0002537;3.13e-13;5!CL:0002535;4.88e-09;2!CL:0002536;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.30e-38,19;CL:0002577,2.17e-21,3;CL:0002541,4.02e-21,3;CL:0002537,3.88e-13,5;CL:0002535,5.08e-09,2;CL:0002536,5.94e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.15e-11!14;DOID:305!1.41e-08!106;DOID:0050687!9.67e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3347;5.53e-17;1!DOID:3112;1.93e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,5.53e-17,1;DOID:3112,1.65e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.21e-32!14;UBERON:0000158!2.21e-32!14;UBERON:0000478!2.45e-20!24;UBERON:0003124!2.99e-19!7;UBERON:0000305!6.17e-15!7;UBERON:0004923!1.94e-14!57;UBERON:0004871!5.83e-13!8;UBERON:0001987!2.19e-11!4;UBERON:0004340!2.19e-11!4;UBERON:0000476!1.39e-09!3;UBERON:0000920!1.39e-09!3;UBERON:0001949!6.88e-09!3;UBERON:0005911!3.46e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;8.42e-38;10!UBERON:0000158;8.42e-38;10!UBERON:0000478;1.61e-30;24!UBERON:0003124;4.45e-21;3!UBERON:0000920;4.45e-21;3!UBERON:0000305;3.33e-20;7!UBERON:0001987;2.74e-16;4!UBERON:0006955;4.88e-09;2!UBERON:0004801;4.88e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.83e-52,14;UBERON:0000158,1.83e-52,14;UBERON:0003124,5.68e-35,7;UBERON:0000478,1.61e-30,24;UBERON:0000920,4.02e-21,3;UBERON:0000305,3.67e-20,7;UBERON:0004871,9.91e-18,8;UBERON:0001987,2.64e-16,4;UBERON:0004340,2.64e-16,4;UBERON:0004923,7.40e-11,66;UBERON:0006955,5.08e-09,2;UBERON:0004801,5.08e-09,2;UBERON:0000995,3.57e-07,21;UBERON:0005795,7.18e-07,22;UBERON:0003975,7.18e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.74753097704138,0.527533956456907,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0.303127571446259,3.32870879020994,1.5119514666484,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,3.26661148915902,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38338342632836,0,0,1.91400695839152,1.19076871422421,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,2.52471699083167,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.422401346077626,0,2.87872795979168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706756583783524,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.733714394086716,0.924205329202706,0.381382095467167,5.52287940848081,0,0,0,0,0,1.63771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,7.23004112298449,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533636729388577,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:62394455..62394466,+ | |||
}} |
Latest revision as of 21:46, 24 July 2015
Short description: | p@chr14:62394455..62394466, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:62394455..62394466, + |
Coexpression cluster: | C1729_prostate_osteosarcoma_large_choriocarcinoma_chorionic_amniotic_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.30e-38 | 19 |
placental epithelial cell | 2.17e-21 | 3 |
chorionic membrane mesenchymal stem cell | 4.02e-21 | 3 |
amnion mesenchymal stem cell | 3.88e-13 | 5 |
epithelial cell of cervix | 5.08e-09 | 2 |
amniotic epithelial cell | 5.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.83e-52 | 14 |
membranous layer | 1.83e-52 | 14 |
chorion | 5.68e-35 | 7 |
extraembryonic structure | 1.61e-30 | 24 |
egg chorion | 4.02e-21 | 3 |
amnion | 3.67e-20 | 7 |
somatic layer of lateral plate mesoderm | 9.91e-18 | 8 |
placenta | 2.64e-16 | 4 |
allantois | 2.64e-16 | 4 |
organ component layer | 7.40e-11 | 66 |
uterine epithelium | 5.08e-09 | 2 |
cervix epithelium | 5.08e-09 | 2 |
uterus | 3.57e-07 | 21 |
embryonic uterus | 7.18e-07 | 22 |
internal female genitalia | 7.18e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 5.53e-17 | 1 |
papillary adenocarcinoma | 1.65e-16 | 1 |