FFCP PHASE1:Hg19::chr14:105330834..105330858,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:105330834..105330858,+ | |||
|coexpression_cluster_id=C511 | |||
|description=CAGE_peak_at_chr14:105330834..105330858,+ | |description=CAGE_peak_at_chr14:105330834..105330858,+ | ||
|id=chr14:105330834..105330858,+ | |id=chr14:105330834..105330858,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.92e-39!254;CL:0002076!7.72e-21!43;CL:0000223!4.21e-18!59;CL:0002368!3.39e-10!13;CL:0002251!4.48e-10!21;CL:0002202!7.23e-07!9;CL:0002632!7.23e-07!9 | |ontology_enrichment_celltype=CL:0000066!1.92e-39!254;CL:0002076!7.72e-21!43;CL:0000223!4.21e-18!59;CL:0002368!3.39e-10!13;CL:0002251!4.48e-10!21;CL:0002202!7.23e-07!9;CL:0002632!7.23e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.33e-23;42!CL:0002368;2.04e-16;13!CL:0002251;9.18e-11;20!CL:0002202;4.51e-10;9!CL:0002632;4.51e-10;9!CL:0002159;1.10e-09;14!CL:0000039;1.56e-09;7!CL:0000586;1.56e-09;7!CL:0002327;1.02e-08;4!CL:0000349;1.09e-08;19!CL:0000244;2.37e-08;4!CL:0000731;2.37e-08;4!CL:0002328;9.10e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.95e-44,253;CL:0002076,1.13e-30,42;CL:0000223,2.81e-23,58;CL:0002368,1.67e-16,13;CL:0002251,9.50e-11,20;CL:0002202,3.88e-10,9;CL:0002632,3.88e-10,9;CL:0002159,7.88e-10,14;CL:0000039,1.24e-09,7;CL:0000586,1.24e-09,7;CL:0000349,9.40e-09,19;CL:0002327,1.14e-08,4;CL:0000244,3.05e-08,4;CL:0000731,3.05e-08,4;CL:0000076,8.71e-08,63;CL:0002328,6.18e-07,3;CL:0002577,9.15e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;3.12e-13;58 | |||
|ontology_enrichment_disease=DOID:305!5.67e-26!106;DOID:0050687!3.36e-16!143;DOID:1749!1.04e-10!14;DOID:299!1.33e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.38e-17;14!DOID:305;1.91e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.31e-22,106;DOID:1749,6.60e-18,14;DOID:0050687,3.11e-16,143;DOID:162,3.45e-07,235;DOID:14566,8.36e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.75e-24!169;UBERON:0000925!7.75e-24!169;UBERON:0006595!7.75e-24!169;UBERON:0001007!1.59e-17!155;UBERON:0001555!1.59e-17!155;UBERON:0007026!1.59e-17!155;UBERON:0001004!2.65e-17!72;UBERON:0000077!1.56e-15!130;UBERON:0004921!5.69e-14!129;UBERON:0004185!5.69e-14!129;UBERON:0000065!1.53e-12!53;UBERON:0000064!3.27e-12!219;UBERON:0001041!2.83e-11!98;UBERON:0008947!6.12e-11!38;UBERON:0003258!6.12e-11!38;UBERON:0000464!1.20e-10!104;UBERON:0000481!4.78e-10!347;UBERON:0005911!4.86e-10!82;UBERON:0000466!4.92e-10!126;UBERON:0000062!8.11e-10!511;UBERON:0005153!2.79e-09!37;UBERON:0005631!4.27e-09!14;UBERON:0000158!4.27e-09!14;UBERON:0000072!4.54e-09!46;UBERON:0003104!1.75e-08!238;UBERON:0009142!1.75e-08!238;UBERON:0000161!4.19e-08!35;UBERON:0000468!6.94e-08!659;UBERON:0003124!3.06e-07!7;UBERON:0006554!3.08e-07!44;UBERON:0000166!3.26e-07!21;UBERON:0000922!3.89e-07!612;UBERON:0000467!4.00e-07!625;UBERON:0001737!4.30e-07!9;UBERON:0000480!4.94e-07!626;UBERON:0001008!6.64e-07!45;UBERON:0005157!7.86e-07!51;UBERON:0001048!9.14e-07!168 | |ontology_enrichment_uberon=UBERON:0004119!7.75e-24!169;UBERON:0000925!7.75e-24!169;UBERON:0006595!7.75e-24!169;UBERON:0001007!1.59e-17!155;UBERON:0001555!1.59e-17!155;UBERON:0007026!1.59e-17!155;UBERON:0001004!2.65e-17!72;UBERON:0000077!1.56e-15!130;UBERON:0004921!5.69e-14!129;UBERON:0004185!5.69e-14!129;UBERON:0000065!1.53e-12!53;UBERON:0000064!3.27e-12!219;UBERON:0001041!2.83e-11!98;UBERON:0008947!6.12e-11!38;UBERON:0003258!6.12e-11!38;UBERON:0000464!1.20e-10!104;UBERON:0000481!4.78e-10!347;UBERON:0005911!4.86e-10!82;UBERON:0000466!4.92e-10!126;UBERON:0000062!8.11e-10!511;UBERON:0005153!2.79e-09!37;UBERON:0005631!4.27e-09!14;UBERON:0000158!4.27e-09!14;UBERON:0000072!4.54e-09!46;UBERON:0003104!1.75e-08!238;UBERON:0009142!1.75e-08!238;UBERON:0000161!4.19e-08!35;UBERON:0000468!6.94e-08!659;UBERON:0003124!3.06e-07!7;UBERON:0006554!3.08e-07!44;UBERON:0000166!3.26e-07!21;UBERON:0000922!3.89e-07!612;UBERON:0000467!4.00e-07!625;UBERON:0001737!4.30e-07!9;UBERON:0000480!4.94e-07!626;UBERON:0001008!6.64e-07!45;UBERON:0005157!7.86e-07!51;UBERON:0001048!9.14e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.22e-09;5!UBERON:0005631;3.41e-09;10!UBERON:0000158;3.41e-09;10!UBERON:0000486;8.42e-09;12!UBERON:0001911;1.02e-08;4!UBERON:0005910;5.96e-08;6!UBERON:0000065;2.21e-07;44!UBERON:0001004;7.89e-07;65!UBERON:0004815;9.10e-07;3!UBERON:0002031;9.10e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.75e-15,160;UBERON:0000925,3.75e-15,160;UBERON:0006595,3.75e-15,160;UBERON:0005631,9.72e-13,14;UBERON:0000158,9.72e-13,14;UBERON:0001004,6.14e-12,74;UBERON:0003124,7.23e-10,7;UBERON:0000365,1.39e-09,5;UBERON:0000065,1.07e-08,54;UBERON:0001911,1.14e-08,4;UBERON:0005333,1.14e-08,4;UBERON:0008425,1.14e-08,4;UBERON:0005311,1.14e-08,4;UBERON:0001007,1.79e-08,145;UBERON:0001555,1.79e-08,145;UBERON:0007026,1.79e-08,145;UBERON:0005910,6.62e-08,6;UBERON:0004815,6.18e-07,3;UBERON:0002031,6.18e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.45733936501509,6.28021051175185,4.15038607047327,3.4289707169699,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,6.6265302131215,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,2.5500670180478,5.56176664176644,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,7.41359888642308,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0.169560592310488,3.47869535693934,1.90922284413584,1.43402297694502,0.243947412259191,0.265059536642971,0.69716365721711,0.414644220061482,0.252320850875628,0,0,0,0,0,0,1.0647612003586,1.68584690078102,1.44606617930089,0.992645754591546,1.08939722046203,0.949082476444386,1.21348177344148,0.784885860501384,0.769494313892781,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0,1.97550513735526,1.1240175325762,2.41269533787914,1.01847289674383,0,0,0,0.115930404975077,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,2.68771405118175,3.82792762554443,4.29880908973672,4.06887513919547,9.96794965829549,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,6.06255142892519,1.66435439510497,3.62868351995616,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,1.0877350463246,3.40860999515584,7.27439812593581,0,0,0,0.902399225814824,0.462092022626489,2.35304930753057,2.92278449306521,0.422206515571503,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,2.80363900349542,2.49322802678617,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.515205058238611,0,0,3.44559322797703,3.90036147621913,0,0,0,0,0,0,0,0,0,1.65284915360978,2.11409074101617,4.33883222481586,4.6532579193553,0,0.62962469366128,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,1.34710957815717,3.35151137767894,5.44454924306613,0.282431402330337,2.15252686335615,3.36942951335251,3.10401107475673,2.75668080248351,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,3.58116727106535,0.593929361665277,3.37876772309155,0,0.140669416410513,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,3.41499734359842,1.43216939740487,0,0,0,0,0,0,0,0.7812832832557,1.22443999994674,0,2.04828206913899,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0.21787692703798,2.78847488557207,0.230850775511391,0,2.76676685265672,1.43612231055635,5.10642648033438,8.29403015302991,1.83195186803725,2.13213910407454,0,0,0,0,0,0,0,0,0.210998064528027,1.14262965711403,0.141353071433941,0,0,0.353830258013357,0,0,0,0,0,0,0,0,4.10895699757388,0,0,1.20990716048664,0,0,0,0,0,0,0,0,1.42304773014896,0,2.77695581336209,1.27390116638691,6.61649970011059,0.698906672968121,0,1.06431964417994,1.75414361006845,1.56019368401098,0.872901148395775,0,0.225980740780532,0,0,0.0633107959558787,1.95551382734803,0.480952921509202,1.06726497369676,1.19885765749278,0.288180834308212,0,0,1.1524383839052,0.124252535565433,4.00679858848552,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0.223171457441873,0,0,0,0.315132729228895,0.0824158583811665,0.337017719270924,0,0,0,0,0.482259445395058,0.825236619583403,0,0.2249738915515,0.77380195455795,0.182248669974074,2.34804281319486,0.236417121897595,0.262272940674991,0,0,7.29277749813892,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,2.55336503108073,0,0.2506898940227,0,0,0.157054096250234,0,0.488105059607853,0.1251909307065,0,0.221858103073705,0.248385611765534,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.150257608997218,1.14241563650639,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,1.07220795687463,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0.245772908753719,2.53574548030352,0,0,0,0,0,2.09819261579167,3.73246356019784,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,2.55184068102667,0.235939446695481,3.85200056895526,2.88814165375846,0,0,0,0.150420656698515,0,0.781514011233092,2.3571602503328,0.163771917510097,3.252833896775,0.270150338473579,0,0.206686796501184,0.126831620387814,1.09394961803644,1.09651553371436,0.992422356778588,0,2.17196126987312,0,0,0,0,0.79832133146375,0,0,0.135939465953663,0.328863867814245,0.236387681767936,0.444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| ||
|short_description=p@chr14:105330834..105330858,+ | |short_description=p@chr14:105330834..105330858,+ | ||
}} | }} |
Latest revision as of 18:28, 24 July 2015
Short description: | p@chr14:105330834..105330858, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:105330834..105330858, + |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.95e-44 | 253 |
endo-epithelial cell | 1.13e-30 | 42 |
endodermal cell | 2.81e-23 | 58 |
respiratory epithelial cell | 1.67e-16 | 13 |
epithelial cell of alimentary canal | 9.50e-11 | 20 |
epithelial cell of tracheobronchial tree | 3.88e-10 | 9 |
epithelial cell of lower respiratory tract | 3.88e-10 | 9 |
general ecto-epithelial cell | 7.88e-10 | 14 |
germ line cell | 1.24e-09 | 7 |
germ cell | 1.24e-09 | 7 |
extraembryonic cell | 9.40e-09 | 19 |
mammary gland epithelial cell | 1.14e-08 | 4 |
transitional epithelial cell | 3.05e-08 | 4 |
urothelial cell | 3.05e-08 | 4 |
squamous epithelial cell | 8.71e-08 | 63 |
bronchial epithelial cell | 6.18e-07 | 3 |
placental epithelial cell | 9.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.75e-15 | 160 |
endoderm | 3.75e-15 | 160 |
presumptive endoderm | 3.75e-15 | 160 |
extraembryonic membrane | 9.72e-13 | 14 |
membranous layer | 9.72e-13 | 14 |
respiratory system | 6.14e-12 | 74 |
chorion | 7.23e-10 | 7 |
urothelium | 1.39e-09 | 5 |
respiratory tract | 1.07e-08 | 54 |
mammary gland | 1.14e-08 | 4 |
mammary bud | 1.14e-08 | 4 |
mammary ridge | 1.14e-08 | 4 |
mammary placode | 1.14e-08 | 4 |
digestive system | 1.79e-08 | 145 |
digestive tract | 1.79e-08 | 145 |
primitive gut | 1.79e-08 | 145 |
transitional epithelium | 6.62e-08 | 6 |
lower respiratory tract epithelium | 6.18e-07 | 3 |
epithelium of bronchus | 6.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.31e-22 | 106 |
squamous cell carcinoma | 6.60e-18 | 14 |
cell type cancer | 3.11e-16 | 143 |
cancer | 3.45e-07 | 235 |
disease of cellular proliferation | 8.36e-07 | 239 |