FFCP PHASE1:Hg19::chr13:76210057..76210116,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:76210057..76210116,-
|short_description=p@chr13:76210057..76210116,-
|description=CAGE_peak_at_chr13:76210057..76210116,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:76210057..76210116,- | |||
|coexpression_cluster_id=C2270 | |||
|description=CAGE_peak_at_chr13:76210057..76210116,- | |||
|id=chr13:76210057..76210116,- | |||
|ontology_enrichment_celltype=CL:0000055!4.73e-24!180;CL:0000057!2.45e-17!75;CL:0002620!4.06e-08!23;CL:0000548!6.37e-07!679;CL:0000004!6.37e-07!679;CL:0000255!6.37e-07!679;CL:0000048!7.75e-07!430;CL:0000144!7.85e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.83e-09;55!CL:0002320;4.91e-08;188!CL:0002620;6.02e-08;23!CL:0000349;6.04e-08;19!CL:0002334;1.03e-07;12!CL:0000048;1.50e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.24e-17,76;CL:0000048,2.39e-12,427;CL:0000723,1.01e-11,433;CL:0000034,6.42e-11,441;CL:0002320,1.63e-09,361;CL:0000134,1.90e-08,354;CL:0000349,4.66e-08,19;CL:0002620,7.76e-08,23;CL:0002334,8.60e-08,12;CL:0000136,4.51e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.18e-07!95;UBERON:0004923!1.21e-07!57;UBERON:0000914!1.30e-07!83;UBERON:0002329!1.30e-07!83;UBERON:0003077!1.30e-07!83;UBERON:0003059!1.30e-07!83;UBERON:0007282!1.30e-07!83;UBERON:0009618!1.30e-07!83;UBERON:0007285!1.30e-07!83;UBERON:0005256!5.17e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.72e-09;9!UBERON:0000042;1.72e-09;9!UBERON:0003688;5.82e-09;6!UBERON:0002358;5.82e-09;6!UBERON:0003684;5.82e-09;6!UBERON:0001178;5.82e-09;6!UBERON:0002384;1.08e-07;198!UBERON:0000478;1.18e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.65e-10,371;UBERON:0002199,2.51e-09,46;UBERON:0002416,2.51e-09,46;UBERON:0003688,6.39e-09,6;UBERON:0002358,6.39e-09,6;UBERON:0003684,6.39e-09,6;UBERON:0001178,6.39e-09,6;UBERON:0004923,6.54e-08,66;UBERON:0000478,9.21e-08,24;UBERON:0003102,9.62e-08,99;UBERON:0002097,2.62e-07,41 | |||
|phase1_expression=25.6166514771485,2.99740733447376,8.3163098416623,21.0153926541574,4.02264984984559,6.97870819280295,10.1319951267324,0.631719873426831,1.82829939739887,0,0,0.655324116390517,2.11013582582763,0.990130823680373,3.31397375727916,0,0,0,0,0.123121058076788,0.408001382488506,0,0.572471974262113,0.410623275218653,0.125542639594803,0,0,0,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0.670700859703636,3.70801429346238,6.50590474292219,10.0267582127178,7.38717246700201,1.5905718941022,6.8128881842369,0.283604451492204,0.443458794925128,0.175669571386252,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,11.9273268406876,0.633152558322899,0.132409180813219,1.14734648299525,4.61068896857864,5.04609840128076,0,4.44001587150888,0.311211035399766,0,0.163461903113459,0.605429710579726,0.576175924479999,0.70296429550139,0,0,1.34503812496621,0.23486899728753,0.809364721840658,0.140450806702248,1.22492502752936,1.10550885580591,1.23990937410919,5.94001428641027,2.22540236350701,0,5.03032699271367,0,0.250237039743928,1.10825646193673,2.63386572528503,22.6800968891275,0.901428353439581,1.58805056424029,0.89694817844431,3.84403299873421,4.4505699243508,0.300091096084402,2.78241828943785,3.34932702059318,22.8923733287855,1.0126579934476,4.77441325289873,1.51460264546469,10.769838141149,1.13152239773168,2.4850671476163,12.3925080819998,7.12154487704048,0.386521706326594,0,0,0,0.265059536642971,0,0.207322110030741,0,0,3.12899064659632,3.21620469096443,2.76269842704961,17.6459812652152,4.33127689001751,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,1.95484983186195,1.03993478527958,0,0,4.22671299248958,0,0.925971025153221,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0.514137463516618,0,0,0.784917590417525,0.43596006883328,0.80672114403045,6.07577064061555,3.57656445851882,0,13.0309677126587,20.8014873822732,1.28603687131071,0,3.46348832720929,0.57191197463259,5.96883765930587,4.11620168390384,0,0,1.58390374586686,0,0,0.899756920638513,0,0,0,1.67737398844108,0,2.85273810081437,13.75422413342,6.98619496671304,1.43248770591916,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,1.59498939234882,4.00136416847742,5.96783052139418,2.28767947683888,13.7390321373815,3.6271555457805,13.1198384791839,4.8151375956435,2.27407504055985,7.24311499047534,1.99267679560631,1.10621501125022,7.29822361531896,0.783204629850962,0,0,0,0.213455115606889,0,0,1.81434175997808,37.4642789806353,1.38115775959256,10.1037633995906,13.4546106718486,32.2375566912023,17.5330774046532,13.3576259800492,3.70103265126373,1.59805552781814,0.328508624055237,0,0.929683027679674,0.483437798366489,0,0,3.90369123759663,2.00300284807389,8.39196255740314,0.451199612907412,0.462092022626489,0,1.46139224653261,0.211103257785751,0,0.170093705276516,0.647747748306418,0,1.08378575017541,0.501689773854853,0,0,0.447749509444357,0,0,0,1.96808787419823,0.650756789328606,0,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0.773365746336976,0,0,0.275673144969061,0.429680979473094,0.145016693914229,0.170453254832202,1.24644849905432,0,0.384380134730212,0,0,0.464845549297286,0.31481234683064,0.6970372701606,0,3.19383618190213,0,0.18532421910392,0.143124886741991,0,4.11293252134344,2.2875623270859,1.27948895655667,0.42793898803392,1.27281299170375,0,0.899362287916574,2.19629623788844,2.00281083987667,4.24583211303964,0,0.421258456238981,2.92580243453754,2.43713489631284,0,0.9554993798559,5.37340641424108,0,0,1.32687795048244,0,0.578775534266688,1.31178950409327,3.24656603140326,0,2.81695602532241,4.01551786171344,8.25291944510218,3.5667105148125,1.41904425628239,4.85547561184627,4.28083360847872,0,0.349934720244983,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,5.64232893582013,0.307160702099232,0,0.140669416410513,0.333926115068718,0,0,0.597743964753209,0,0,0,0,19.9065336103557,0,0,0,0.0986434056369336,0,32.2297271419447,0,0,0,0,0,0,0.796554137998498,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.871507708151921,0,0.307801034015188,0.569710279235006,0,1.70539524378567,0.217294743844016,2.23300811812344,3.75550132947635,3.19820865611181,0,0.470940769185074,0,0,0,0,0,0,0.843992258112108,3.7543545876604,0.989471500037586,0.216388639742091,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.31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| ||
|short_description=p@chr13:76210057..76210116,- | |||
}} | }} |
Latest revision as of 17:06, 24 July 2015
Short description: | p@chr13:76210057..76210116, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:76210057..76210116, - |
Coexpression cluster: | C2270_bone_basal_Fibroblast_Olfactory_Preadipocyte_Chondrocyte_osteoclastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.24e-17 | 76 |
multi fate stem cell | 2.39e-12 | 427 |
somatic stem cell | 1.01e-11 | 433 |
stem cell | 6.42e-11 | 441 |
connective tissue cell | 1.63e-09 | 361 |
mesenchymal cell | 1.90e-08 | 354 |
extraembryonic cell | 4.66e-08 | 19 |
skin fibroblast | 7.76e-08 | 23 |
preadipocyte | 8.60e-08 | 12 |
fat cell | 4.51e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.65e-10 | 371 |
integument | 2.51e-09 | 46 |
integumental system | 2.51e-09 | 46 |
omentum | 6.39e-09 | 6 |
peritoneum | 6.39e-09 | 6 |
abdominal cavity | 6.39e-09 | 6 |
visceral peritoneum | 6.39e-09 | 6 |
organ component layer | 6.54e-08 | 66 |
extraembryonic structure | 9.21e-08 | 24 |
surface structure | 9.62e-08 | 99 |
skin of body | 2.62e-07 | 41 |