FFCP PHASE1:Hg19::chr13:111164338..111164351,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:111164338..111164351,+ | |||
|coexpression_cluster_id=C823 | |||
|description=CAGE_peak_at_chr13:111164338..111164351,+ | |||
|id=chr13:111164338..111164351,+ | |||
|ontology_enrichment_celltype=CL:0000222!5.37e-19!119;CL:0000055!3.53e-13!180;CL:0000183!1.54e-12!59;CL:0000680!5.12e-11!57;CL:0000056!5.12e-11!57;CL:0000355!5.12e-11!57;CL:0000187!2.63e-10!54;CL:0000192!7.55e-10!42;CL:0000514!7.55e-10!42;CL:0000393!5.18e-08!60;CL:0000211!5.18e-08!60;CL:0000213!1.01e-07!57;CL:0000215!1.01e-07!57;CL:0002078!1.46e-07!44;CL:0000220!2.14e-07!246;CL:0002321!4.04e-07!248;CL:0000115!6.06e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000349;9.96e-09;19!CL:0002144;2.72e-08;3!CL:1000746;4.19e-08;7!CL:1000612;4.19e-08;7!CL:0000115;5.95e-08;36!CL:0002541;6.47e-08;3!CL:0002188;9.26e-08;5!CL:0002569;6.31e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.24e-10,36;CL:0000349,1.01e-08,19;CL:0000213,1.65e-08,58;CL:0000215,1.65e-08,58;CL:0002144,3.16e-08,3;CL:1000746,9.75e-08,7;CL:1000612,9.75e-08,7;CL:0002541,1.17e-07,3;CL:0002188,1.50e-07,5;CL:0000222,1.69e-07,121;CL:0002078,3.57e-07,45;CL:0002569,5.88e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.22e-16!79;UBERON:0007798!7.22e-16!79;UBERON:0005256!6.46e-13!143;UBERON:0000055!9.34e-12!69;UBERON:0000490!1.40e-11!138;UBERON:0003914!1.89e-11!118;UBERON:0001009!3.08e-11!113;UBERON:0004535!4.59e-11!110;UBERON:0001134!1.11e-10!61;UBERON:0002036!1.11e-10!61;UBERON:0003082!1.11e-10!61;UBERON:0002385!1.29e-10!63;UBERON:0001015!1.29e-10!63;UBERON:0000383!1.29e-10!63;UBERON:0004872!3.23e-10!84;UBERON:0001981!3.96e-10!60;UBERON:0007500!3.96e-10!60;UBERON:0004537!3.96e-10!60;UBERON:0006965!3.96e-10!60;UBERON:0002100!3.39e-09!216;UBERON:0004290!3.58e-09!70;UBERON:0000353!6.35e-09!17;UBERON:0000914!3.49e-08!83;UBERON:0002329!3.49e-08!83;UBERON:0003077!3.49e-08!83;UBERON:0003059!3.49e-08!83;UBERON:0007282!3.49e-08!83;UBERON:0009618!3.49e-08!83;UBERON:0007285!3.49e-08!83;UBERON:0000486!7.10e-08!82;UBERON:0004876!1.45e-07!20;UBERON:0003064!1.93e-07!37;UBERON:0001637!3.40e-07!42;UBERON:0003509!3.40e-07!42;UBERON:0004572!3.40e-07!42;UBERON:0000119!5.16e-07!312;UBERON:0000483!8.73e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;7.29e-09;7!UBERON:0009142;7.29e-09;7!UBERON:0000353;1.30e-08;15!UBERON:0010523;2.72e-08;3!UBERON:0001915;2.72e-08;3!UBERON:0001982;2.72e-08;3!UBERON:0000478;3.30e-08;24!UBERON:0000074;4.19e-08;7!UBERON:0001229;4.19e-08;7!UBERON:0003124;6.47e-08;3!UBERON:0000920;6.47e-08;3!UBERON:0003422;6.31e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.91e-11,117;UBERON:0002049,1.28e-10,78;UBERON:0007798,1.28e-10,78;UBERON:0000055,1.58e-09,68;UBERON:0004535,3.93e-09,109;UBERON:0001009,1.06e-08,112;UBERON:0004872,1.38e-08,83;UBERON:0000353,2.55e-08,15;UBERON:0010523,3.16e-08,3;UBERON:0001915,3.16e-08,3;UBERON:0001982,3.16e-08,3;UBERON:0000478,3.34e-08,24;UBERON:0007500,5.32e-08,59;UBERON:0001981,5.32e-08,59;UBERON:0004537,5.32e-08,59;UBERON:0006965,5.32e-08,59;UBERON:0010532,9.75e-08,7;UBERON:0000074,9.75e-08,7;UBERON:0001229,9.75e-08,7;UBERON:0001230,9.75e-08,7;UBERON:0003220,9.75e-08,7;UBERON:0005749,9.75e-08,7;UBERON:0004199,9.75e-08,7;UBERON:0004209,9.75e-08,7;UBERON:0004198,9.75e-08,7;UBERON:0000920,1.17e-07,3;UBERON:0003422,5.88e-07,6 | |||
|phase1_expression=0.726713517082227,1.71280419112787,0.281908808191942,0,3.12872766099101,3.48935409640147,5.06599756336621,0.631719873426831,0.261185628199839,0.737201809504527,2.09340350391728,0,0.527533956456907,0.247532705920093,0,4.03395087871065,1.20538905604795,0.730310090387373,0,0,0,0,0.85870796139317,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0.361439152384566,1.00267582127178,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.702678285545008,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.838998872419812,1.6507082516404,0.417989933073621,0.775250277507987,0,0.33472061276467,2.01414658554573,2.28081631715554,3.66093086322254,0.367663080345869,2.43042584364528,0.625098097988558,0,0.225222960966644,0,0,0,0,0,0,0.993943903390637,1.51956613997496,0,0.573673241497627,0.354668382198357,1.68203280042692,4.2699598291882,6.66002380726332,0,1.0776853765575,0.817309515567294,1.51357427644931,2.88087962239999,0.234321431833797,0,0.570471821544449,0.298897361103602,0,0,0.140450806702248,0,0,0.103325781175765,0,1.23633464639278,0,0.718618141816238,0,0,0,0.877955241761676,0,0.150238058906597,1.24775401476023,1.4351170855109,0.213557388818567,0.847727604638247,0.300091096084402,0.206105058476878,1.03056216018252,0.37223371266318,0.675105328965065,0,0.252433774244115,0.276149695926898,0,1.06502877754984,0.10075209822764,1.18692414617341,0,0,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0.134831308160164,0,0,1.4763109092493,5.60967095213783,0.4115740113314,0,0,0,0,0,0,0.857839051492628,0,0,0.402115889646523,0.0925884451585296,0,1.03993478527958,1.44331342025273,0.231860809950154,0.70445216541493,3.03169540298255,2.77791307545966,3.61482889245737,0,0.858486162094873,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.719792448923265,0,0.571652865261156,0.224262168690721,0,0.80672114403045,0.387815147273333,0,3.381211010224,1.86156681609409,2.08014873822732,0,0,0.266422179016099,1.71573592389777,2.71310802695722,0,0.65147236858747,1.77695974371273,3.95975936466715,0,0,0.599837947092342,0,0,0,2.15662369942424,2.29723871668228,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,1.45579603071565,1.96271887676878,1.57702415033935,0.585707074963566,0.300946099727719,0,0,1.32845119707087,0.184369168541703,0,2.34961388955289,4.80400793335198,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.561320188866147,0.256278298511402,0.511707249066704,1.44768529029247,0,0,0,0,0,0.116210378459959,0,0.40101294060657,0,0.229628896329213,0.546273504020151,0.655622074797121,0,1.15523005656622,0,0,0.949964660035881,1.13733384070897,0.170093705276516,1.29549549661284,3.08454505380579,0.541892875087706,1.00337954770971,0.254876273045038,0.831076008928724,0.671624264166535,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.15350367472613,0.275673144969061,0.429680979473094,0.145016693914229,0.170453254832202,0.0890320356467374,0.165284915360978,0.192190067365106,0.255225424989168,0.10115778085555,0.464845549297286,1.5740617341532,0,0.616067160352178,0,0,0.18532421910392,0.429374660225974,0.744316738719335,0.632758849437452,1.14378116354295,0.255897791311334,0.42793898803392,0,1.56989728039846,0.179872457583315,0.274537029736055,0.824686816419805,0,1.58510321173008,0,3.41343617362713,0.974853958525138,0,0.545999645631943,0.565621727814851,0,0,0.66343897524122,0.438450885253763,0.578775534266688,1.9676842561399,1.01455188481352,0.6196469961995,0.563391205064483,0.286822704408103,0.589494246078727,1.78335525740625,0.354761064070598,0,0,0,0.349934720244983,0.192444225451024,0,0,0.376575203107117,1.29151611801369,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0.494411622680279,0,1.39473591775749,0.276283915531148,0,0,0,0.622079175323615,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0.922255617552241,0.179515288819544,0.108647371922008,2.23300811812344,1.00757352742049,3.73124343213044,0,0,0,0,0,0,0,0,1.89898258075224,0.652931232636591,0,0,0,0.176915129006678,1.22206028986725,0.296521128680622,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0.271808412147228,0.209205692624666,0.101998217636322,0,0,0,0,0.429765441419957,0,1.39641200636127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| |||
|short_description=p@chr13:111164338..111164351,+ | |||
}} |
Latest revision as of 14:32, 24 July 2015
Short description: | p@chr13:111164338..111164351, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:111164338..111164351, + |
Coexpression cluster: | C823_Fibroblast_Endothelial_hepatic_Pericytes_umbilical_Adipocyte_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.24e-10 | 36 |
extraembryonic cell | 1.01e-08 | 19 |
lining cell | 1.65e-08 | 58 |
barrier cell | 1.65e-08 | 58 |
capillary endothelial cell | 3.16e-08 | 3 |
glomerular cell | 9.75e-08 | 7 |
kidney corpuscule cell | 9.75e-08 | 7 |
chorionic membrane mesenchymal stem cell | 1.17e-07 | 3 |
glomerular endothelial cell | 1.50e-07 | 5 |
mesodermal cell | 1.69e-07 | 121 |
meso-epithelial cell | 3.57e-07 | 45 |
mesenchymal stem cell of umbilical cord | 5.88e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.91e-11 | 117 |
vasculature | 1.28e-10 | 78 |
vascular system | 1.28e-10 | 78 |
vessel | 1.58e-09 | 68 |
cardiovascular system | 3.93e-09 | 109 |
circulatory system | 1.06e-08 | 112 |
splanchnic layer of lateral plate mesoderm | 1.38e-08 | 83 |
parenchyma | 2.55e-08 | 15 |
microcirculatory vessel | 3.16e-08 | 3 |
endothelium of capillary | 3.16e-08 | 3 |
capillary | 3.16e-08 | 3 |
extraembryonic structure | 3.34e-08 | 24 |
epithelial tube open at both ends | 5.32e-08 | 59 |
blood vessel | 5.32e-08 | 59 |
blood vasculature | 5.32e-08 | 59 |
vascular cord | 5.32e-08 | 59 |
primitive nephron | 9.75e-08 | 7 |
renal glomerulus | 9.75e-08 | 7 |
renal corpuscle | 9.75e-08 | 7 |
glomerular capsule | 9.75e-08 | 7 |
metanephric mesenchyme | 9.75e-08 | 7 |
glomerular tuft | 9.75e-08 | 7 |
S-shaped body | 9.75e-08 | 7 |
renal vesicle | 9.75e-08 | 7 |
comma-shaped body | 9.75e-08 | 7 |
egg chorion | 1.17e-07 | 3 |
mesenchyme of umbilical cord | 5.88e-07 | 6 |