FFCP PHASE1:Hg19::chr12:46970842..46970846,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:46970842..46970846,+ | |||
|description=CAGE_peak_at_chr12:46970842..46970846,+ | |description=CAGE_peak_at_chr12:46970842..46970846,+ | ||
|id=chr12:46970842..46970846,+ | |id=chr12:46970842..46970846,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;6.72e-26;1!CL:0000164;6.72e-26;1!CL:0000502;6.72e-26;1!CL:0000172;6.72e-26;1!CL:0000173;6.72e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,7.62e-26,1;CL:0000164,7.62e-26,1;CL:0000502,7.62e-26,1;CL:0000172,7.62e-26,1;CL:0000173,7.62e-26,1;CL:0002351,7.62e-26,1 | |||
|ontology_enrichment_development_v019=CL:0002351;6.72e-26;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;2.15e-26;1!DOID:4549;2.15e-26;1!DOID:5861;2.15e-26;1!DOID:6496;2.15e-26;1!DOID:4430;6.72e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.16e-26,1;DOID:4549,2.16e-26,1;DOID:5861,2.16e-26,1;DOID:6496,2.16e-26,1;DOID:4430,7.62e-26,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;6.72e-26;1!UBERON:0000026;6.72e-26;1!UBERON:0008784;6.72e-26;1!UBERON:0006058;6.72e-26;1!UBERON:0003663;6.72e-26;1!UBERON:0004256;6.72e-26;1!UBERON:0004708;6.72e-26;1!UBERON:0002101;6.72e-26;1!UBERON:0004709;6.72e-26;1!UBERON:0002529;6.72e-26;1!UBERON:0010538;6.72e-26;1!UBERON:0003661;6.72e-26;1!UBERON:0010890;6.72e-26;1!UBERON:0002471;6.72e-26;1!UBERON:0001383;6.72e-26;1!UBERON:0010758;6.72e-26;1!UBERON:0010707;6.72e-26;1!UBERON:0000978;6.72e-26;1!UBERON:0002103;6.72e-26;1!UBERON:0001665;6.72e-26;1!UBERON:0003823;6.72e-26;1!UBERON:0000154;6.72e-26;1!UBERON:0010709;6.72e-26;1!UBERON:0005090;1.14e-13;2!UBERON:0001630;1.14e-13;2!UBERON:0002418;1.01e-09;3!UBERON:0004755;1.01e-09;3!UBERON:0001134;3.90e-07;16!UBERON:0002036;3.90e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.61e-26,1;UBERON:0001389,4.61e-26,1;UBERON:0000026,4.61e-26,1;UBERON:0008784,4.61e-26,1;UBERON:0006058,4.61e-26,1;UBERON:0003663,4.61e-26,1;UBERON:0004256,4.61e-26,1;UBERON:0004708,4.61e-26,1;UBERON:0002101,4.61e-26,1;UBERON:0004709,4.61e-26,1;UBERON:0002529,4.61e-26,1;UBERON:0010538,4.61e-26,1;UBERON:0003661,4.61e-26,1;UBERON:0010890,4.61e-26,1;UBERON:0002471,4.61e-26,1;UBERON:0001383,4.61e-26,1;UBERON:0004357,4.61e-26,1;UBERON:0004347,4.61e-26,1;UBERON:0005420,4.61e-26,1;UBERON:0005732,4.61e-26,1;UBERON:0010758,4.61e-26,1;UBERON:0010707,4.61e-26,1;UBERON:0000978,4.61e-26,1;UBERON:0002103,4.61e-26,1;UBERON:0001665,4.61e-26,1;UBERON:0003823,4.61e-26,1;UBERON:0000154,4.61e-26,1;UBERON:0010709,4.61e-26,1;UBERON:0005733,4.61e-26,1;UBERON:0005730,4.61e-26,1;UBERON:0005090,9.40e-14,2;UBERON:0001630,9.40e-14,2;UBERON:0002418,1.01e-09,3;UBERON:0004755,1.01e-09,3 | |||
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|short_description=p@chr12:46970842..46970846,+ | |short_description=p@chr12:46970842..46970846,+ | ||
}} | }} |
Latest revision as of 08:42, 24 July 2015
Short description: | p@chr12:46970842..46970846, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:46970842..46970846, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 7.62e-26 | 1 |
enteroendocrine cell | 7.62e-26 | 1 |
type D enteroendocrine cell | 7.62e-26 | 1 |
somatostatin secreting cell | 7.62e-26 | 1 |
pancreatic D cell | 7.62e-26 | 1 |
progenitor cell of endocrine pancreas | 7.62e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 4.61e-26 | 1 |
soleus muscle | 4.61e-26 | 1 |
appendage | 4.61e-26 | 1 |
lower limb segment | 4.61e-26 | 1 |
multi-limb segment region | 4.61e-26 | 1 |
hindlimb muscle | 4.61e-26 | 1 |
hindlimb zeugopod muscle | 4.61e-26 | 1 |
paired limb/fin | 4.61e-26 | 1 |
limb | 4.61e-26 | 1 |
pelvic appendage | 4.61e-26 | 1 |
limb segment | 4.61e-26 | 1 |
paired limb/fin segment | 4.61e-26 | 1 |
limb muscle | 4.61e-26 | 1 |
pelvic complex muscle | 4.61e-26 | 1 |
zeugopod | 4.61e-26 | 1 |
muscle of leg | 4.61e-26 | 1 |
paired limb/fin bud | 4.61e-26 | 1 |
limb bud | 4.61e-26 | 1 |
pelvic appendage bud | 4.61e-26 | 1 |
limb/fin field | 4.61e-26 | 1 |
subdivision of organism along appendicular axis | 4.61e-26 | 1 |
appendage girdle complex | 4.61e-26 | 1 |
leg | 4.61e-26 | 1 |
hindlimb | 4.61e-26 | 1 |
triceps surae | 4.61e-26 | 1 |
hindlimb zeugopod | 4.61e-26 | 1 |
posterior region of body | 4.61e-26 | 1 |
pelvic complex | 4.61e-26 | 1 |
limb field | 4.61e-26 | 1 |
hindlimb/pelvic fin field | 4.61e-26 | 1 |
muscle structure | 9.40e-14 | 2 |
muscle organ | 9.40e-14 | 2 |
cartilage tissue | 1.01e-09 | 3 |
skeletal tissue | 1.01e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.16e-26 | 1 |
extraosseous chondrosarcoma | 2.16e-26 | 1 |
myxoid chondrosarcoma | 2.16e-26 | 1 |
extraskeletal myxoid chondrosarcoma | 2.16e-26 | 1 |
somatostatinoma | 7.62e-26 | 1 |