FFCP PHASE1:Hg19::chr11:2154248..2154285,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_CU674261_5end | |association_with_transcript=30bp_to_CU674261_5end | ||
|cluster_id=chr11:2154248..2154285,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_1_at_CU674261_5end | |description=CAGE_peak_1_at_CU674261_5end | ||
|id=chr11:2154248..2154285,+ | |id=chr11:2154248..2154285,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.52e-17;19!CL:0002537;1.46e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.51e-17,19;CL:0002537,1.42e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.31e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.89e-13!14;UBERON:0000158!4.89e-13!14;UBERON:0000481!4.69e-12!347;UBERON:0000119!1.07e-10!312;UBERON:0007023!1.21e-10!115;UBERON:0000483!4.24e-10!309;UBERON:0000468!6.08e-10!659;UBERON:0000478!6.66e-10!24;UBERON:0000475!1.22e-09!365;UBERON:0000064!4.47e-09!219;UBERON:0004119!1.05e-08!169;UBERON:0000925!1.05e-08!169;UBERON:0006595!1.05e-08!169;UBERON:0000922!5.64e-08!612;UBERON:0003124!1.38e-07!7;UBERON:0000305!4.61e-07!7;UBERON:0000153!5.75e-07!129;UBERON:0007811!5.75e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;7.84e-17;24!UBERON:0005631;1.63e-14;10!UBERON:0000158;1.63e-14;10!UBERON:0000305;2.29e-10;7!UBERON:0002107;1.42e-09;19!UBERON:0006925;1.42e-09;19!UBERON:0001987;4.87e-07;4!UBERON:0011135;7.93e-07;5!UBERON:0002216;7.93e-07;5!UBERON:0011134;7.93e-07;5!UBERON:0002209;7.93e-07;5!UBERON:0002213;7.93e-07;5!UBERON:0007844;7.93e-07;5!UBERON:0011138;7.93e-07;5!UBERON:0001130;7.93e-07;5!UBERON:0001066;7.93e-07;5!UBERON:0001468;7.93e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.25e-20,14;UBERON:0000158,6.25e-20,14;UBERON:0000478,7.78e-17,24;UBERON:0003124,3.26e-11,7;UBERON:0003104,5.53e-11,160;UBERON:0009142,5.53e-11,160;UBERON:0000305,2.24e-10,7;UBERON:0002107,1.83e-09,19;UBERON:0006925,1.83e-09,19;UBERON:0008836,1.83e-09,19;UBERON:0004871,7.10e-09,8;UBERON:0004119,7.21e-08,160;UBERON:0000925,7.21e-08,160;UBERON:0006595,7.21e-08,160;UBERON:0008835,1.06e-07,22;UBERON:0003894,1.06e-07,22;UBERON:0005256,1.29e-07,122;UBERON:0007499,2.13e-07,25;UBERON:0004923,2.27e-07,66;UBERON:0009854,3.19e-07,23;UBERON:0001987,4.82e-07,4;UBERON:0004340,4.82e-07,4;UBERON:0009856,5.61e-07,26;UBERON:0006554,7.25e-07,47;UBERON:0011135,8.78e-07,5;UBERON:0002216,8.78e-07,5;UBERON:0011134,8.78e-07,5;UBERON:0002209,8.78e-07,5;UBERON:0002213,8.78e-07,5;UBERON:0005856,8.78e-07,5;UBERON:0005866,8.78e-07,5;UBERON:0005863,8.78e-07,5;UBERON:0007844,8.78e-07,5;UBERON:0011138,8.78e-07,5;UBERON:0001130,8.78e-07,5;UBERON:0001066,8.78e-07,5;UBERON:0001468,8.78e-07,5 | |||
|phase1_expression=1.81678379270557,0.642301571672949,0.140954404095971,8.00586386825043,1.78784437770915,6.10636966870258,0,0,0.261185628199839,0.737201809504527,1.39560233594486,37.7903573785198,35.3447750826128,1.23766352960047,4.97096063591874,0,0,0,0,0.369363174230364,6.5280221198161,2.82109249330279,0,0.136874425072884,0,0,0,0,0,0,1.85779347979291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,4.34539556882471,0,0.486634870302636,0.850813354476611,0,0.702678285545008,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0.17859945656816,0,0,0,0,0.732806975721629,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0,4.08665054641315,6.33793516927999,0.234321431833797,0,0,0,0,0,0,0,0.61417158655884,0.103325781175765,4.75201142912821,5.19260551484969,0,0.718618141816238,0.841680569770331,0.500474079487857,0,0,0,0.901428353439581,0.567160915800105,0,0.640672166455702,0,0,0,0,0,0,0,0,0.0920498986422993,0.80823028409406,0,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,3.83440011469411,2.59152637538426,0.756962552626885,0,0,0,0,17.1816133371832,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,3.80265104465493,0,3.54473944008842,0,26.0735489711401,0.171567810298526,0,0,0,2.22212268380471,1.95484983186195,0,1.44331342025273,0.463721619900307,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,3.92364061949952,0.4400297149257,0,0,0,1.59562869950922,3.12022310734098,0.771622122786426,5.67396528093113,0.532844358032199,6.86294369559108,81.3932408087165,2.46972101034231,0,6.75244702610837,3.16780749173372,0,0,0,0,0,0,0,0,0,2.02693829334611,3.6985738059069,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,20.1214046419389,5.00170521059677,5.96783052139418,10.6065139380712,8.20773348466944,7.09660867652706,5.97421216462837,0,0,4.1389228517002,0,0,0.0868836144680828,63.4395750179279,101.570453448013,0,0,0,13.3376131436354,28.2940247167845,82.5525500790027,0,0.767309866440312,0.280660094433074,0,1.53512174720011,0.482561763430822,1.48418066444991,0,0,0,0.519254429183621,0,29.9731434987223,0.200506470303285,0.368323955743585,1.95184561879831,0.728364672026868,1.57349297951309,0,1.38627606787947,0,0,0.316654886678627,0,0,0.863663664408557,6.16909010761157,4.87703587578935,1.00337954770971,0,0,0.223874754722178,0.438519753291869,0.522870902049801,0,0.656029291399411,0,9.78889610653362,0.183138929636687,0.082509499920588,0,0,0,1.7400729292582,0.770243085573222,0.921022048356777,2.75673144969061,0.322260734604821,2.46528379654188,1.53407929348982,31.2502445120048,0.661139661443912,0.576570202095319,0.127612712494584,0.4046311234222,0,0,0,0,0,0.869932992075073,0,0,1.86079184679834,6.01120906965579,2.09693213316207,1.02359116524534,6.41908482050881,0,0,4.49681143958287,2.19629623788844,0.706874414074119,0,0,0,7.31450608634386,0,0,7.09799539321526,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,1.72093622644862,5.69844437876103,0,0,0,0.329294892959902,1.13841952129715,1.39973888097993,0,0,0,7.81393546447267,5.16606447205476,1.68471475667626,5.32116184244011,14.2428508128315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,1.70481688083848,88.8129483224207,63.8474063790173,58.0533726967549,0.994147647766298,0.140669416410513,0,0,1.68900326502395,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.887790650732402,0,0,0.969332746095218,0.371072392647405,0,0,0,1.44999915086959,0,0,0,0.344743373241465,0,0,0,0,0,0.221158519862449,0,0.438770794307945,0,0,2.00070672109872,0,5.07240589653732,0,0,148.016538115611,7.69419784575643,125.263172364379,0,0,0,0,0,0,0,0,0,0,2.96841450011276,0,0,0.265372693510018,1.83309043480088,0,0,0,0.67401132980677,61.7984788420067,0,0,0,0,0.394584402849391,15.7287930863263,1.53036380815245,5.49723242767845,0,0,0,0,0,0,0,0,0,0,0,2.97035336011451,0,0,0,0,0.484945082442097,0.176512253383001,8.58726814966023,0,0,0.50648636764703,0,0,0.213452994739353,12.5880054036742,0,0,39.6384445061138,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,1.95497680890578,0.229160424011684,0,1.39775300349294,0.429226048136571,0.446342914883745,8.80103489576114,1.08089965062721,1.16495949527454,31.1193570113533,33.3784226443724,36.3305101374057,18.799648969317,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.630445658393585,5.03564046095982,0.316801009558219,0,0,3.57347663186684,2.64836788146173,0,0,0,0,0,0,0,0.679872549120754,4.39656701034247,34.4517911171775,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0.488105059607853,0,1.14681839138014,1.22021956690538,0.869349641179368,0,0.624902039810533,0,0,0.941063278792687,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5652351854352,0,0,0,0.181848659202559,0,0,0,4.80033317595784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0.764467467344097,0,0,0,0,0,0,0,3.17408349321616,0.918736432059601,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0.322951291263702,0,0,0.11796972334774,0,0,0,0,7.75773266253471,1.72983755203292,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.317079050969534,0.546974809018219,0,0,0,0,0.535701835878287,0.672567444437648,0.606965604236632,0.682986574053893,15.966426629275,0,0,0.135939465953663,0.131545547125698,0,0.111231401892069,2.19780659981439,0,10.0897978792964,8.21842848458546,0,0,4.86040500401263,0,0,23.992441577756,1.60342272946051,0,0,0,0.860454717640555,0,0,0,0.68732060563215,0,0,0,0,2.56027642462766,0.647428837187895,0.821302454849976,63.789793723601,0.971421986118279,0,13.1307511606503,0.118920090777569,0,0,0,0.154348316215889,2.62271472604749,0,1.22574160876953,2.12108892391463,1.76677620403451,0.297046400327086,5.4945244585842,0,0,2.38494185502236,0,0.178553938605658,0,0,2.19100916473955,0,0.860037498908708,2.68211655728414,0.339957450954573,1.30905207102113,4.7612415646386,0,0.924351257262837,3.02838593486652,0,0,0,0,0,0,0,2.19758224832894,0.803892390468535,0,0.103432995861895,1.49263787330687,23.3303142834466,0.193766729508018,1.05527014302958,0,0.190941474834495,8.48892193624521,0.870866991587845,69.8155934213973,0.404112318087525,0.430333232356058,14.6370556880246,1.95367844666339,0,0,17.3362640065713,30.5033225124491,0.366724332548599,8.95171592294625,0,1.00636896795513,0 | |phase1_expression=1.81678379270557,0.642301571672949,0.140954404095971,8.00586386825043,1.78784437770915,6.10636966870258,0,0,0.261185628199839,0.737201809504527,1.39560233594486,37.7903573785198,35.3447750826128,1.23766352960047,4.97096063591874,0,0,0,0,0.369363174230364,6.5280221198161,2.82109249330279,0,0.136874425072884,0,0,0,0,0,0,1.85779347979291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,4.34539556882471,0,0.486634870302636,0.850813354476611,0,0.702678285545008,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0.17859945656816,0,0,0,0,0.732806975721629,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0,4.08665054641315,6.33793516927999,0.234321431833797,0,0,0,0,0,0,0,0.61417158655884,0.103325781175765,4.75201142912821,5.19260551484969,0,0.718618141816238,0.841680569770331,0.500474079487857,0,0,0,0.901428353439581,0.567160915800105,0,0.640672166455702,0,0,0,0,0,0,0,0,0.0920498986422993,0.80823028409406,0,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,3.83440011469411,2.59152637538426,0.756962552626885,0,0,0,0,17.1816133371832,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,3.80265104465493,0,3.54473944008842,0,26.0735489711401,0.171567810298526,0,0,0,2.22212268380471,1.95484983186195,0,1.44331342025273,0.463721619900307,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,3.92364061949952,0.4400297149257,0,0,0,1.59562869950922,3.12022310734098,0.771622122786426,5.67396528093113,0.532844358032199,6.86294369559108,81.3932408087165,2.46972101034231,0,6.75244702610837,3.16780749173372,0,0,0,0,0,0,0,0,0,2.02693829334611,3.6985738059069,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,20.1214046419389,5.00170521059677,5.96783052139418,10.6065139380712,8.20773348466944,7.09660867652706,5.97421216462837,0,0,4.1389228517002,0,0,0.0868836144680828,63.4395750179279,101.570453448013,0,0,0,13.3376131436354,28.2940247167845,82.5525500790027,0,0.767309866440312,0.280660094433074,0,1.53512174720011,0.482561763430822,1.48418066444991,0,0,0,0.519254429183621,0,29.9731434987223,0.200506470303285,0.368323955743585,1.95184561879831,0.728364672026868,1.57349297951309,0,1.38627606787947,0,0,0.316654886678627,0,0,0.863663664408557,6.16909010761157,4.87703587578935,1.00337954770971,0,0,0.223874754722178,0.438519753291869,0.522870902049801,0,0.656029291399411,0,9.78889610653362,0.183138929636687,0.082509499920588,0,0,0,1.7400729292582,0.770243085573222,0.921022048356777,2.75673144969061,0.322260734604821,2.46528379654188,1.53407929348982,31.2502445120048,0.661139661443912,0.576570202095319,0.127612712494584,0.4046311234222,0,0,0,0,0,0.869932992075073,0,0,1.86079184679834,6.01120906965579,2.09693213316207,1.02359116524534,6.41908482050881,0,0,4.49681143958287,2.19629623788844,0.706874414074119,0,0,0,7.31450608634386,0,0,7.09799539321526,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,1.72093622644862,5.69844437876103,0,0,0,0.329294892959902,1.13841952129715,1.39973888097993,0,0,0,7.81393546447267,5.16606447205476,1.68471475667626,5.32116184244011,14.2428508128315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,1.70481688083848,88.8129483224207,63.8474063790173,58.0533726967549,0.994147647766298,0.140669416410513,0,0,1.68900326502395,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.887790650732402,0,0,0.969332746095218,0.371072392647405,0,0,0,1.44999915086959,0,0,0,0.344743373241465,0,0,0,0,0,0.221158519862449,0,0.438770794307945,0,0,2.00070672109872,0,5.07240589653732,0,0,148.016538115611,7.69419784575643,125.263172364379,0,0,0,0,0,0,0,0,0,0,2.96841450011276,0,0,0.265372693510018,1.83309043480088,0,0,0,0.67401132980677,61.7984788420067,0,0,0,0,0.394584402849391,15.7287930863263,1.53036380815245,5.49723242767845,0,0,0,0,0,0,0,0,0,0,0,2.97035336011451,0,0,0,0,0.484945082442097,0.176512253383001,8.58726814966023,0,0,0.50648636764703,0,0,0.213452994739353,12.5880054036742,0,0,39.6384445061138,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,1.95497680890578,0.229160424011684,0,1.39775300349294,0.429226048136571,0.446342914883745,8.80103489576114,1.08089965062721,1.16495949527454,31.1193570113533,33.3784226443724,36.3305101374057,18.799648969317,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.630445658393585,5.03564046095982,0.316801009558219,0,0,3.57347663186684,2.64836788146173,0,0,0,0,0,0,0,0.679872549120754,4.39656701034247,34.4517911171775,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0.488105059607853,0,1.14681839138014,1.22021956690538,0.869349641179368,0,0.624902039810533,0,0,0.941063278792687,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5652351854352,0,0,0,0.181848659202559,0,0,0,4.80033317595784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0.764467467344097,0,0,0,0,0,0,0,3.17408349321616,0.918736432059601,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0.322951291263702,0,0,0.11796972334774,0,0,0,0,7.75773266253471,1.72983755203292,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.317079050969534,0.546974809018219,0,0,0,0,0.535701835878287,0.672567444437648,0.606965604236632,0.682986574053893,15.966426629275,0,0,0.135939465953663,0.131545547125698,0,0.111231401892069,2.19780659981439,0,10.0897978792964,8.21842848458546,0,0,4.86040500401263,0,0,23.992441577756,1.60342272946051,0,0,0,0.860454717640555,0,0,0,0.68732060563215,0,0,0,0,2.56027642462766,0.647428837187895,0.821302454849976,63.789793723601,0.971421986118279,0,13.1307511606503,0.118920090777569,0,0,0,0.154348316215889,2.62271472604749,0,1.22574160876953,2.12108892391463,1.76677620403451,0.297046400327086,5.4945244585842,0,0,2.38494185502236,0,0.178553938605658,0,0,2.19100916473955,0,0.860037498908708,2.68211655728414,0.339957450954573,1.30905207102113,4.7612415646386,0,0.924351257262837,3.02838593486652,0,0,0,0,0,0,0,2.19758224832894,0.803892390468535,0,0.103432995861895,1.49263787330687,23.3303142834466,0.193766729508018,1.05527014302958,0,0.190941474834495,8.48892193624521,0.870866991587845,69.8155934213973,0.404112318087525,0.430333232356058,14.6370556880246,1.95367844666339,0,0,17.3362640065713,30.5033225124491,0.366724332548599,8.95171592294625,0,1.00636896795513,0 | ||
|short_description=p1@CU674261 | |short_description=p1@CU674261 | ||
}} | }} |
Latest revision as of 21:01, 23 July 2015
Short description: | p1@CU674261 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU674261_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 30bp_to_CU674261_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.51e-17 | 19 |
amnion mesenchymal stem cell | 1.42e-07 | 5 |