FFCP PHASE1:Hg19::chr11:2016752..2016772,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_BC106079_5end | |association_with_transcript=-8bp_to_BC106079_5end | ||
|cluster_id=chr11:2016752..2016772,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_5_at_BC106079_5end | |description=CAGE_peak_5_at_BC106079_5end | ||
|id=chr11:2016752..2016772,- | |id=chr11:2016752..2016772,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.29e-23;19!CL:0002577;1.97e-12;3!CL:0002536;6.93e-09;2!CL:0002575;7.63e-09;2!CL:0002537;5.47e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.51e-23,19;CL:0002577,2.39e-12,3;CL:0002536,6.68e-09,2;CL:0002575,7.50e-09,2;CL:0002537,5.48e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.50e-08;2!UBERON:0010056;3.50e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.45e-17!14;UBERON:0000158!5.45e-17!14;UBERON:0001737!8.10e-14!9;UBERON:0001557!1.78e-13!19;UBERON:0003124!2.34e-12!7;UBERON:0004923!1.85e-11!57;UBERON:0000478!4.46e-10!24;UBERON:0004119!1.36e-09!169;UBERON:0000925!1.36e-09!169;UBERON:0006595!1.36e-09!169;UBERON:0003104!1.66e-09!238;UBERON:0009142!1.66e-09!238;UBERON:0004921!1.71e-09!129;UBERON:0004185!1.71e-09!129;UBERON:0000077!3.52e-09!130;UBERON:0001007!1.02e-08!155;UBERON:0001555!1.02e-08!155;UBERON:0007026!1.02e-08!155;UBERON:0001041!5.67e-08!98;UBERON:0000481!6.74e-08!347;UBERON:0001987!8.98e-08!4;UBERON:0004340!8.98e-08!4;UBERON:0000072!3.10e-07!46;UBERON:0000305!9.31e-07!7 | |ontology_enrichment_uberon=UBERON:0005631!5.45e-17!14;UBERON:0000158!5.45e-17!14;UBERON:0001737!8.10e-14!9;UBERON:0001557!1.78e-13!19;UBERON:0003124!2.34e-12!7;UBERON:0004923!1.85e-11!57;UBERON:0000478!4.46e-10!24;UBERON:0004119!1.36e-09!169;UBERON:0000925!1.36e-09!169;UBERON:0006595!1.36e-09!169;UBERON:0003104!1.66e-09!238;UBERON:0009142!1.66e-09!238;UBERON:0004921!1.71e-09!129;UBERON:0004185!1.71e-09!129;UBERON:0000077!3.52e-09!130;UBERON:0001007!1.02e-08!155;UBERON:0001555!1.02e-08!155;UBERON:0007026!1.02e-08!155;UBERON:0001041!5.67e-08!98;UBERON:0000481!6.74e-08!347;UBERON:0001987!8.98e-08!4;UBERON:0004340!8.98e-08!4;UBERON:0000072!3.10e-07!46;UBERON:0000305!9.31e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.32e-21;24!UBERON:0005631;4.22e-19;10!UBERON:0000158;4.22e-19;10!UBERON:0001737;1.19e-18;9!UBERON:0001557;1.19e-18;9!UBERON:0001987;8.60e-16;4!UBERON:0000305;2.41e-14;7!UBERON:0001723;8.69e-12;3!UBERON:0001033;8.69e-12;3!UBERON:0001134;2.28e-10;16!UBERON:0002036;2.28e-10;16!UBERON:0005090;4.44e-09;2!UBERON:0001630;4.44e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.01e-32,14;UBERON:0000158,3.01e-32,14;UBERON:0000478,2.62e-21,24;UBERON:0003124,8.72e-20,7;UBERON:0001737,8.72e-19,9;UBERON:0001557,2.67e-17,19;UBERON:0001987,1.15e-15,4;UBERON:0004340,1.15e-15,4;UBERON:0000305,2.35e-14,7;UBERON:0004871,1.63e-12,8;UBERON:0001723,5.68e-12,3;UBERON:0001033,5.68e-12,3;UBERON:0010056,5.68e-12,3;UBERON:0005090,4.53e-09,2;UBERON:0001630,4.53e-09,2;UBERON:0001041,3.96e-07,87;UBERON:0000072,4.03e-07,47;UBERON:0004923,4.18e-07,66 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,2.61701557230111,0,0,0,0.245733936501509,0,6.77168253603534,4.74780560811216,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43317435151318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0,0,0.454072282934794,1.15235184896,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,1.53798840051797,0.337169380156203,2.16909926895134,2.31617342738027,1.52515610864684,1.66089433377768,1.48314438976181,0.588664395376038,2.30848294167834,0,0,0.8231480226628,5.88034845542168,0,0,1.18157981336281,0,0,0,0,0,0,0.277765335475589,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,13.0229185293946,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,1.02738161275192,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,3.10419213877515,0,0,0,4.50342662164303,5.49029478097369,0,0,0,7.27506171471023,9.98612637062982,2.11673205330776,0.744323423456331,0.153461973288062,0.280660094433074,0.640695746278505,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0.650060246036521,0,0.676695028044854,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.426133137080504,1.4245125703478,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.294747123039363,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,22.9194705348182,14.8482340416319,36.8592842519079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,1.07709173291727,1.73835795075213,15.3120556671321,0.915975934018623,32.5151213371367,0,0,0,0.225595660617181,0.392125068635479,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,20.8670188297685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99238438328521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,1.43574604915363,0,0,1.33902874465124,0.604651252380536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.786818822024972,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0.293104467356165,10.6005511129777,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0.754773679776773,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.183428598521679,2.65709032145778,0,0,0,0,0,0,2.88097363929565,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,2.21755925406597,0,0.685952037749674,0,0,0,0,0.078493092850514,0,1.96190514319652,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0,0,5.17943069750316,1.33461648913121,3.4794432940146,4.37139893753226,0,0,0,0,0,0,0,0.218559560503957,0,0,0.235676547101626,0,0,0.8453114551668,0,0,0.257831551894309,0,0,0,0,3.65168194123259,0,0,0,0,0.436350690340377,2.645134202577,0.371995018166751,0,3.02838593486652,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,1.66645102024618,0,0.0620747142958579,0,0,1.21270313374932,1.95945073107265,5.13349951627922,0.0673520530145875,0.143444410785353,1.33064142618405,0.162806537221949,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 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| ||
|short_description=p5@BC106079 | |short_description=p5@BC106079 | ||
}} | }} |
Latest revision as of 20:54, 23 July 2015
Short description: | p5@BC106079 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BC106079_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -8bp_to_BC106079_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.51e-23 | 19 |
placental epithelial cell | 2.39e-12 | 3 |
amniotic epithelial cell | 6.68e-09 | 2 |
central nervous system pericyte | 7.50e-09 | 2 |
amnion mesenchymal stem cell | 5.48e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.01e-32 | 14 |
membranous layer | 3.01e-32 | 14 |
extraembryonic structure | 2.62e-21 | 24 |
chorion | 8.72e-20 | 7 |
larynx | 8.72e-19 | 9 |
upper respiratory tract | 2.67e-17 | 19 |
placenta | 1.15e-15 | 4 |
allantois | 1.15e-15 | 4 |
amnion | 2.35e-14 | 7 |
somatic layer of lateral plate mesoderm | 1.63e-12 | 8 |
tongue | 5.68e-12 | 3 |
gustatory system | 5.68e-12 | 3 |
future tongue | 5.68e-12 | 3 |
muscle structure | 4.53e-09 | 2 |
muscle organ | 4.53e-09 | 2 |
foregut | 3.96e-07 | 87 |
segment of respiratory tract | 4.03e-07 | 47 |
organ component layer | 4.18e-07 | 66 |