FFCP PHASE1:Hg19::chr11:2016689..2016722,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_BC106079_5end | |association_with_transcript=21bp_to_BC106079_5end | ||
|cluster_id=chr11:2016689..2016722,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_3_at_BC106079_5end | |description=CAGE_peak_3_at_BC106079_5end | ||
|id=chr11:2016689..2016722,- | |id=chr11:2016689..2016722,- | ||
|ontology_enrichment_celltype=CL:0000188!5.33e-08!9 | |ontology_enrichment_celltype=CL:0000188!5.33e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.33e-21;19!CL:0000056;1.88e-11;4!CL:0002577;4.67e-10;3!CL:0002541;5.35e-10;3!CL:0000515;4.06e-09;3!CL:0002536;2.34e-07;2!CL:0002575;4.38e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.36e-21,19;CL:0000515,1.42e-11,4;CL:0002577,4.34e-10,3;CL:0002541,5.70e-10,3;CL:0002536,2.42e-07,2;CL:0002575,4.45e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000515;1.88e-11;4!UBERON:0008814;5.25e-07;2!UBERON:0010056;5.25e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.44e-14!14;UBERON:0000158!1.44e-14!14;UBERON:0000478!2.16e-11!24;UBERON:0001737!2.33e-11!9;UBERON:0001557!6.86e-11!19;UBERON:0003124!9.82e-11!7;UBERON:0003104!6.82e-10!238;UBERON:0009142!6.82e-10!238;UBERON:0004923!1.31e-09!57;UBERON:0000077!8.63e-08!130;UBERON:0004119!1.50e-07!169;UBERON:0000925!1.50e-07!169;UBERON:0006595!1.50e-07!169;UBERON:0004921!5.03e-07!129;UBERON:0004185!5.03e-07!129;UBERON:0001987!8.10e-07!4;UBERON:0004340!8.10e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.35e-22;24!UBERON:0005631;1.87e-19;10!UBERON:0000158;1.87e-19;10!UBERON:0001737;2.60e-18;9!UBERON:0001557;2.60e-18;9!UBERON:0001134;3.37e-13;16!UBERON:0002036;3.37e-13;16!UBERON:0001987;1.34e-12;4!UBERON:0000305;1.29e-11;7!UBERON:0003124;5.35e-10;3!UBERON:0000920;5.35e-10;3!UBERON:0001723;8.65e-10;3!UBERON:0001033;8.65e-10;3!UBERON:0005090;9.76e-08;2!UBERON:0001630;9.76e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.11e-30,14;UBERON:0000158,4.11e-30,14;UBERON:0000478,1.31e-22,24;UBERON:0003124,6.53e-21,7;UBERON:0001737,2.26e-18,9;UBERON:0001557,1.06e-15,19;UBERON:0001987,1.16e-12,4;UBERON:0004340,1.16e-12,4;UBERON:0000305,1.32e-11,7;UBERON:0004871,4.26e-10,8;UBERON:0000920,5.70e-10,3;UBERON:0001723,9.48e-10,3;UBERON:0001033,9.48e-10,3;UBERON:0010056,9.48e-10,3;UBERON:0000072,1.06e-08,47;UBERON:0004119,7.41e-08,160;UBERON:0000925,7.41e-08,160;UBERON:0006595,7.41e-08,160;UBERON:0005090,9.77e-08,2;UBERON:0001630,9.77e-08,2;UBERON:0001041,2.96e-07,87;UBERON:0000065,3.49e-07,54;UBERON:0004921,4.35e-07,118;UBERON:0004923,7.40e-07,66 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,1.0007329835313,0,3.48935409640147,0,0,0,0,0.697801167972428,9.17453762946723,7.12170841216825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.933633106199299,0,0,0,0,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,1.8929088006375,2.36018566109342,0.241011029883482,1.54411561825352,1.08939722046203,1.18635309555548,2.29213223872279,1.17732879075208,1.53898862778556,0,0,1.2347220339942,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4802969240032,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,2.02693829334611,1.84928690295345,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,3.91602314925481,6.17658162859541,0,0,0,6.66880657181771,19.9722527412596,3.93107381328584,0.496215615637554,0,0.280660094433074,0.512556597022804,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.580024309752732,0.308097234229289,1.38153307253517,0.827019434907183,0,0.870100163485371,0.596586391912706,0.534192213880424,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0,7.27496279657665,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,5.24715801637306,0,0,0,0,0.294747123039363,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,74.9657682076347,29.9934327640965,124.707245052288,0,0,0,0,0.211125408127993,0,1.10513566212459,1.0077309914171,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0.724999575434793,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0.23056390438806,1.07709173291727,1.84700532267414,26.1580950980174,1.19076871422421,67.6954165543666,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,81.8629200244765,0,0,0.19566461893209,0,0.394584402849391,6.04953580243319,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.92199335066233,0,0,0,0,0.290967049465258,0.0882561266915003,1.12990370390266,0,0,0,0.195551382734803,0,0,10.9895285270172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.916641696046735,1.43574604915363,0.199679000498991,0.858452096273142,0.669514372325618,0.940568614814168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.577000469484979,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,37.101928895422,0,0,0,0,0,0.628817220398664,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.00055529326307,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48830904013189,0,1.07824811396682,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.733714394086716,4.04339831526184,0,0,0,0,0,0,12.8334280295897,0,0.887136517302272,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,2.66107110487917,0,1.54339208493677,0,0,0,0,0.235479278551542,0,10.9306143692378,14.6105395281519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60374807980835,0,0,0,0,0,31.7240130222068,1.12929087541872,6.95888658802919,6.79995390282795,0,0,0,0,0,0,0,0.874238242015829,0,0.490296643507811,0.471353094203252,0,0,2.113278637917,0,0.0939839179798536,0.580120991762195,0,0.357107877211315,0,0,13.1460549884373,0,0,0.157771562193185,0,0,5.81929524566941,0.371995018166751,0,0.432626562123789,0,0.437062287854782,0,0.407955318967927,0,0,0,0.151557396436479,0,0,0,1.49263787330687,2.61870874610114,0,0.186224142887574,0,0.190941474834495,2.22328907854041,3.48346796635138,6.50243272062034,0.134704106029175,0.215166616178029,3.65926392200615,0.162806537221949,0,0,0,9.38563769613817,0.122241444182866,0.813792356631477,0,0.402547587182052,0 | |phase1_expression=0.54503513781167,0,0.422863212287913,1.0007329835313,0,3.48935409640147,0,0,0,0,0.697801167972428,9.17453762946723,7.12170841216825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.933633106199299,0,0,0,0,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,1.8929088006375,2.36018566109342,0.241011029883482,1.54411561825352,1.08939722046203,1.18635309555548,2.29213223872279,1.17732879075208,1.53898862778556,0,0,1.2347220339942,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4802969240032,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,2.02693829334611,1.84928690295345,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,3.91602314925481,6.17658162859541,0,0,0,6.66880657181771,19.9722527412596,3.93107381328584,0.496215615637554,0,0.280660094433074,0.512556597022804,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.580024309752732,0.308097234229289,1.38153307253517,0.827019434907183,0,0.870100163485371,0.596586391912706,0.534192213880424,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0,7.27496279657665,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,5.24715801637306,0,0,0,0,0.294747123039363,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,74.9657682076347,29.9934327640965,124.707245052288,0,0,0,0,0.211125408127993,0,1.10513566212459,1.0077309914171,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0.724999575434793,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0.23056390438806,1.07709173291727,1.84700532267414,26.1580950980174,1.19076871422421,67.6954165543666,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,81.8629200244765,0,0,0.19566461893209,0,0.394584402849391,6.04953580243319,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.92199335066233,0,0,0,0,0.290967049465258,0.0882561266915003,1.12990370390266,0,0,0,0.195551382734803,0,0,10.9895285270172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.916641696046735,1.43574604915363,0.199679000498991,0.858452096273142,0.669514372325618,0.940568614814168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.577000469484979,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,37.101928895422,0,0,0,0,0,0.628817220398664,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.00055529326307,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48830904013189,0,1.07824811396682,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.733714394086716,4.04339831526184,0,0,0,0,0,0,12.8334280295897,0,0.887136517302272,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,2.66107110487917,0,1.54339208493677,0,0,0,0,0.235479278551542,0,10.9306143692378,14.6105395281519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60374807980835,0,0,0,0,0,31.7240130222068,1.12929087541872,6.95888658802919,6.79995390282795,0,0,0,0,0,0,0,0.874238242015829,0,0.490296643507811,0.471353094203252,0,0,2.113278637917,0,0.0939839179798536,0.580120991762195,0,0.357107877211315,0,0,13.1460549884373,0,0,0.157771562193185,0,0,5.81929524566941,0.371995018166751,0,0.432626562123789,0,0.437062287854782,0,0.407955318967927,0,0,0,0.151557396436479,0,0,0,1.49263787330687,2.61870874610114,0,0.186224142887574,0,0.190941474834495,2.22328907854041,3.48346796635138,6.50243272062034,0.134704106029175,0.215166616178029,3.65926392200615,0.162806537221949,0,0,0,9.38563769613817,0.122241444182866,0.813792356631477,0,0.402547587182052,0 | ||
|short_description=p3@BC106079 | |short_description=p3@BC106079 | ||
}} | }} |
Latest revision as of 20:53, 23 July 2015
Short description: | p3@BC106079 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BC106079_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 21bp_to_BC106079_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.36e-21 | 19 |
skeletal muscle myoblast | 1.42e-11 | 4 |
placental epithelial cell | 4.34e-10 | 3 |
chorionic membrane mesenchymal stem cell | 5.70e-10 | 3 |
amniotic epithelial cell | 2.42e-07 | 2 |
central nervous system pericyte | 4.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.11e-30 | 14 |
membranous layer | 4.11e-30 | 14 |
extraembryonic structure | 1.31e-22 | 24 |
chorion | 6.53e-21 | 7 |
larynx | 2.26e-18 | 9 |
upper respiratory tract | 1.06e-15 | 19 |
placenta | 1.16e-12 | 4 |
allantois | 1.16e-12 | 4 |
amnion | 1.32e-11 | 7 |
somatic layer of lateral plate mesoderm | 4.26e-10 | 8 |
egg chorion | 5.70e-10 | 3 |
tongue | 9.48e-10 | 3 |
gustatory system | 9.48e-10 | 3 |
future tongue | 9.48e-10 | 3 |
segment of respiratory tract | 1.06e-08 | 47 |
endoderm-derived structure | 7.41e-08 | 160 |
endoderm | 7.41e-08 | 160 |
presumptive endoderm | 7.41e-08 | 160 |
muscle structure | 9.77e-08 | 2 |
muscle organ | 9.77e-08 | 2 |
foregut | 2.96e-07 | 87 |
respiratory tract | 3.49e-07 | 54 |
subdivision of digestive tract | 4.35e-07 | 118 |
organ component layer | 7.40e-07 | 66 |