FFCP PHASE1:Hg19::chr11:12188963..12188982,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:12188963..12188982,+ | |||
|description=CAGE_peak_at_chr11:12188963..12188982,+ | |||
|id=chr11:12188963..12188982,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.01e-10!254;CL:0002076!1.10e-07!43;CL:0000077!1.77e-07!19;CL:0002621!2.41e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002535;2.74e-50;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.74e-50,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.56e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:4362;4.21e-21;5!DOID:1749;1.86e-08;14!DOID:3119;2.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,4.21e-21,5;DOID:1749,1.86e-08,14;DOID:3119,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001949!2.41e-07!3;UBERON:0002294!3.75e-07!7;UBERON:0001173!3.75e-07!7;UBERON:0004912!3.75e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.74e-50;2!UBERON:0004801;2.74e-50;2!UBERON:0001052;7.14e-26;4!UBERON:0004907;5.15e-21;5!UBERON:0000002;7.67e-18;6!UBERON:0001560;7.67e-18;6!UBERON:0000059;2.37e-10;11!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18!UBERON:0000160;7.60e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.74e-50,2;UBERON:0004801,2.74e-50,2;UBERON:0001052,7.14e-26,4;UBERON:0004907,5.15e-21,5;UBERON:0000002,7.67e-18,6;UBERON:0001560,7.67e-18,6;UBERON:0000059,2.37e-10,11;UBERON:0000160,7.60e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.382838137483752,0,0,0.62962469366128,0,0,0,0,0.55597265731176,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0.225595660617181,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0.330991955875499,0,0,0.284609546029793,0,0,0.391969589657511,2.69883540399248,0,0,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0,0.195551382734803,0.160317640503067,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0.489473409012935,0,0,0.219284049578707,0.353378291891762,0.192914038270915,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.346576998451015,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.222462803784138,0,0,1.40136081656895,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0,0,0,0.31020638566432,0.955538938977433,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0.178553938605658,0.705789743431384,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.732629417498771,0.426909383510862,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:12188963..12188982,+ | |||
}} |
Latest revision as of 19:14, 23 July 2015
Short description: | p@chr11:12188963..12188982, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:12188963..12188982, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.74e-50 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.74e-50 | 2 |
cervix epithelium | 2.74e-50 | 2 |
rectum | 7.14e-26 | 4 |
lower digestive tract | 5.15e-21 | 5 |
uterine cervix | 7.67e-18 | 6 |
neck of organ | 7.67e-18 | 6 |
large intestine | 2.37e-10 | 11 |
intestine | 7.60e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.21e-21 | 5 |
squamous cell carcinoma | 1.86e-08 | 14 |
gastrointestinal system cancer | 2.00e-08 | 14 |