FFCP PHASE1:Hg19::chr11:119982836..119982847,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:119982836..119982847,- | |||
|coexpression_cluster_id=C1613 | |||
|description=CAGE_peak_at_chr11:119982836..119982847,- | |description=CAGE_peak_at_chr11:119982836..119982847,- | ||
|id=chr11:119982836..119982847,- | |id=chr11:119982836..119982847,- | ||
|ontology_enrichment_celltype=CL:0000066!2.69e-16!254;CL:0002076!3.43e-13!43;CL:0002251!3.07e-11!21;CL:0002159!2.22e-09!13;CL:0000223!3.26e-08!59;CL:0000622!2.58e-07!5;CL:0002623!4.68e-07!3;CL:0000349!5.51e-07!3;CL:0002577!5.51e-07!3;CL:0002541!6.10e-07!3 | |ontology_enrichment_celltype=CL:0000066!2.69e-16!254;CL:0002076!3.43e-13!43;CL:0002251!3.07e-11!21;CL:0002159!2.22e-09!13;CL:0000223!3.26e-08!59;CL:0000622!2.58e-07!5;CL:0002623!4.68e-07!3;CL:0000349!5.51e-07!3;CL:0002577!5.51e-07!3;CL:0002541!6.10e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.03e-11;19!CL:0002541;2.58e-09;3!CL:0002577;4.35e-09;3!CL:0002336;1.97e-07;1!CL:0002261;1.97e-07;1!CL:0002252;1.97e-07;1!CL:0002170;1.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.13e-11,19;CL:0002541,2.99e-09,3;CL:0002577,4.93e-09,3;CL:0002336,1.39e-07,1;CL:0002261,1.39e-07,1;CL:0002170,1.39e-07,1;CL:0002252,1.69e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.35e-13;29!UBERON:0000358;8.83e-08;1!UBERON:0009143;1.97e-07;1!UBERON:0006298;1.97e-07;1 | |||
|ontology_enrichment_disease=DOID:305!3.74e-10!106;DOID:1749!2.30e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001557!1.33e-19!19;UBERON:0001737!1.78e-19!9;UBERON:0001004!1.74e-17!72;UBERON:0004119!5.04e-17!169;UBERON:0000925!5.04e-17!169;UBERON:0006595!5.04e-17!169;UBERON:0003124!9.54e-14!7;UBERON:0005631!2.85e-13!14;UBERON:0000158!2.85e-13!14;UBERON:0000065!4.39e-13!53;UBERON:0000077!5.30e-13!130;UBERON:0000161!2.61e-12!35;UBERON:0000166!1.23e-11!21;UBERON:0001007!1.53e-10!155;UBERON:0001555!1.53e-10!155;UBERON:0007026!1.53e-10!155;UBERON:0000072!2.55e-10!46;UBERON:0003729!4.11e-10!5;UBERON:0000478!6.62e-10!24;UBERON:0001041!9.09e-10!98;UBERON:0000165!1.32e-09!28;UBERON:0000930!1.32e-09!28;UBERON:0000344!3.94e-09!12;UBERON:0004923!8.02e-09!57;UBERON:0004921!8.76e-09!129;UBERON:0004185!8.76e-09!129;UBERON:0001987!1.83e-08!4;UBERON:0004340!1.83e-08!4;UBERON:0003343!3.76e-08!4;UBERON:0004785!3.76e-08!4;UBERON:0008947!1.00e-07!38;UBERON:0003258!1.00e-07!38;UBERON:0001723!2.57e-07!3;UBERON:0001033!2.57e-07!3;UBERON:0010056!2.57e-07!3;UBERON:0000476!6.10e-07!3;UBERON:0000920!6.10e-07!3;UBERON:0005795!7.27e-07!22;UBERON:0003102!7.35e-07!95;UBERON:0000064!8.52e-07!219;UBERON:0000365!9.60e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.40e-43;9!UBERON:0001557;1.40e-43;9!UBERON:0000478;4.79e-12;24!UBERON:0005631;1.98e-10;10!UBERON:0000158;1.98e-10;10!UBERON:0001723;1.13e-09;3!UBERON:0001033;1.13e-09;3!UBERON:0003124;2.58e-09;3!UBERON:0000920;2.58e-09;3!UBERON:0000072;3.67e-09;37!UBERON:0001043;4.35e-09;3!UBERON:0000065;2.30e-08;44!UBERON:0000165;1.42e-07;28!UBERON:0001004;1.89e-07;65!UBERON:0007029;1.97e-07;1!UBERON:0001736;1.97e-07;1!UBERON:0001041;3.78e-07;14!UBERON:0001987;5.05e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.49e-44,9;UBERON:0001557,1.20e-31,19;UBERON:0005631,1.18e-15,14;UBERON:0000158,1.18e-15,14;UBERON:0003124,3.01e-14,7;UBERON:0000478,4.92e-12,24;UBERON:0001004,8.06e-12,74;UBERON:0000072,9.30e-12,47;UBERON:0004119,1.76e-11,160;UBERON:0000925,1.76e-11,160;UBERON:0006595,1.76e-11,160;UBERON:0001041,2.56e-11,87;UBERON:0000065,5.22e-10,54;UBERON:0001723,1.23e-09,3;UBERON:0001033,1.23e-09,3;UBERON:0010056,1.23e-09,3;UBERON:0008947,1.69e-09,38;UBERON:0003258,1.69e-09,38;UBERON:0000920,2.99e-09,3;UBERON:0001043,3.84e-09,3;UBERON:0009143,3.84e-09,3;UBERON:0001007,6.23e-09,145;UBERON:0001555,6.23e-09,145;UBERON:0007026,6.23e-09,145;UBERON:0004921,7.85e-09,118;UBERON:0007029,1.30e-07,1;UBERON:0001736,1.48e-07,1;UBERON:0006298,1.48e-07,1;UBERON:0000165,2.77e-07,29;UBERON:0000930,2.77e-07,29;UBERON:0001987,5.55e-07,4;UBERON:0004340,5.55e-07,4;UBERON:0000166,5.71e-07,22 | |||
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| ||
|short_description=p@chr11:119982836..119982847,- | |short_description=p@chr11:119982836..119982847,- | ||
}} | }} |
Latest revision as of 19:04, 23 July 2015
Short description: | p@chr11:119982836..119982847, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:119982836..119982847, - |
Coexpression cluster: | C1613_tongue_Sebocyte_esophagus_amniotic_throat_Prostate_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.13e-11 | 19 |
chorionic membrane mesenchymal stem cell | 2.99e-09 | 3 |
placental epithelial cell | 4.93e-09 | 3 |
buccal mucosa cell | 1.39e-07 | 1 |
endothelial cell of viscerocranial mucosa | 1.39e-07 | 1 |
keratinized cell of the oral mucosa | 1.39e-07 | 1 |
epithelial cell of esophagus | 1.69e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 9.49e-44 | 9 |
upper respiratory tract | 1.20e-31 | 19 |
extraembryonic membrane | 1.18e-15 | 14 |
membranous layer | 1.18e-15 | 14 |
chorion | 3.01e-14 | 7 |
extraembryonic structure | 4.92e-12 | 24 |
respiratory system | 8.06e-12 | 74 |
segment of respiratory tract | 9.30e-12 | 47 |
endoderm-derived structure | 1.76e-11 | 160 |
endoderm | 1.76e-11 | 160 |
presumptive endoderm | 1.76e-11 | 160 |
foregut | 2.56e-11 | 87 |
respiratory tract | 5.22e-10 | 54 |
tongue | 1.23e-09 | 3 |
gustatory system | 1.23e-09 | 3 |
future tongue | 1.23e-09 | 3 |
respiratory primordium | 1.69e-09 | 38 |
endoderm of foregut | 1.69e-09 | 38 |
egg chorion | 2.99e-09 | 3 |
esophagus | 3.84e-09 | 3 |
esophageal region | 3.84e-09 | 3 |
digestive system | 6.23e-09 | 145 |
digestive tract | 6.23e-09 | 145 |
primitive gut | 6.23e-09 | 145 |
subdivision of digestive tract | 7.85e-09 | 118 |
surface | 1.30e-07 | 1 |
submandibular gland | 1.48e-07 | 1 |
submandibular gland primordium | 1.48e-07 | 1 |
mouth | 2.77e-07 | 29 |
stomodeum | 2.77e-07 | 29 |
placenta | 5.55e-07 | 4 |
allantois | 5.55e-07 | 4 |
oral opening | 5.71e-07 | 22 |